GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002477-TA|BGIBMGA002477-PA|undefined
         (153 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060602-1|AAL28150.1|  201|Drosophila melanogaster GH01933p pro...   153   7e-38
AE013599-1632|AAF58427.1|  201|Drosophila melanogaster CG3955-PA...   153   7e-38
AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p pro...    29   2.1  
AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-P...    29   2.1  
BT001443-1|AAN71198.1|  662|Drosophila melanogaster GH25957p pro...    29   3.6  
AE014298-530|AAF45873.3|  682|Drosophila melanogaster CG10804-PA...    29   3.6  
AE014298-529|AAN09096.1|  662|Drosophila melanogaster CG10804-PB...    29   3.6  

>AY060602-1|AAL28150.1|  201|Drosophila melanogaster GH01933p
           protein.
          Length = 201

 Score =  153 bits (372), Expect = 7e-38
 Identities = 66/119 (55%), Positives = 84/119 (70%), Gaps = 1/119 (0%)

Query: 23  VHVTSAAARPNNELWCYKCLAEVPEDKCADLR-HNNSDLIHKCHNDRRMCMVKRFSYTTS 81
           +H T+AA    N+LWC+ C      + C D+   N+S L+ KC  +  +CMVKRFSYTTS
Sbjct: 46  IHRTAAAIERVNKLWCFACHTMDDGEACVDVAVRNDSALMKKCQGEEFICMVKRFSYTTS 105

Query: 82  TENSTTALKMWALERNCTKHCEPGCIVIGERTKLYACTSCCSTSLCNYGSGAGKAIFFK 140
           TENST++ KMW+L+R CT +CEPGCI+IGERTKLY+CTSCC  S CN G GA   IF +
Sbjct: 106 TENSTSSPKMWSLDRRCTANCEPGCIIIGERTKLYSCTSCCEESFCNTGRGAASGIFHR 164


>AE013599-1632|AAF58427.1|  201|Drosophila melanogaster CG3955-PA
           protein.
          Length = 201

 Score =  153 bits (372), Expect = 7e-38
 Identities = 66/119 (55%), Positives = 84/119 (70%), Gaps = 1/119 (0%)

Query: 23  VHVTSAAARPNNELWCYKCLAEVPEDKCADLR-HNNSDLIHKCHNDRRMCMVKRFSYTTS 81
           +H T+AA    N+LWC+ C      + C D+   N+S L+ KC  +  +CMVKRFSYTTS
Sbjct: 46  IHRTAAAIERVNKLWCFACHTMDDGEACVDVAVRNDSALMKKCQGEEFICMVKRFSYTTS 105

Query: 82  TENSTTALKMWALERNCTKHCEPGCIVIGERTKLYACTSCCSTSLCNYGSGAGKAIFFK 140
           TENST++ KMW+L+R CT +CEPGCI+IGERTKLY+CTSCC  S CN G GA   IF +
Sbjct: 106 TENSTSSPKMWSLDRRCTANCEPGCIIIGERTKLYSCTSCCEESFCNTGRGAASGIFHR 164


>AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p
           protein.
          Length = 1688

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)

Query: 63  KCHNDRRMCMVKRFSYTTSTENSTTALKMWALERNCTKHCE-PGCIVIGERTKLYACTSC 121
           +CH  R +  +  F+Y ++T  STT+    +   N T  CE PG     +RT  +AC+S 
Sbjct: 19  ECH--RLLSDLPAFAYPSTTLRSTTSGH--STGTNSTTVCESPGA---RDRTS-FACSSS 70

Query: 122 CSTSLCN 128
           C +S C+
Sbjct: 71  CVSSACS 77


>AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-PB,
           isoform B protein.
          Length = 1688

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)

Query: 63  KCHNDRRMCMVKRFSYTTSTENSTTALKMWALERNCTKHCE-PGCIVIGERTKLYACTSC 121
           +CH  R +  +  F+Y ++T  STT+    +   N T  CE PG     +RT  +AC+S 
Sbjct: 19  ECH--RLLSDLPAFAYPSTTLRSTTSGH--STGTNSTTVCESPGA---RDRTS-FACSSS 70

Query: 122 CSTSLCN 128
           C +S C+
Sbjct: 71  CVSSACS 77


>BT001443-1|AAN71198.1|  662|Drosophila melanogaster GH25957p
           protein.
          Length = 662

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)

Query: 118 CTSCCSTSLCNYGSGAGKAIF 138
           C SCC+ S+C + +GAG  IF
Sbjct: 459 CFSCCTISMC-FANGAGSYIF 478


>AE014298-530|AAF45873.3|  682|Drosophila melanogaster CG10804-PA,
           isoform A protein.
          Length = 682

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)

Query: 118 CTSCCSTSLCNYGSGAGKAIF 138
           C SCC+ S+C + +GAG  IF
Sbjct: 479 CFSCCTISMC-FANGAGSYIF 498


>AE014298-529|AAN09096.1|  662|Drosophila melanogaster CG10804-PB,
           isoform B protein.
          Length = 662

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 11/21 (52%), Positives = 15/21 (71%), Gaps = 1/21 (4%)

Query: 118 CTSCCSTSLCNYGSGAGKAIF 138
           C SCC+ S+C + +GAG  IF
Sbjct: 459 CFSCCTISMC-FANGAGSYIF 478


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.324    0.133    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,753,774
Number of Sequences: 52641
Number of extensions: 321728
Number of successful extensions: 933
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 929
Number of HSP's gapped (non-prelim): 9
length of query: 153
length of database: 24,830,863
effective HSP length: 79
effective length of query: 74
effective length of database: 20,672,224
effective search space: 1529744576
effective search space used: 1529744576
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 58 (27.5 bits)