GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002477-TA|BGIBMGA002477-PA|undefined
         (153 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   1.4  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   1.4  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    21   4.2  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    21   4.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   9.7  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)

Query: 26  TSAAARPNNELWCYKCLAEVPEDKCADLRH 55
           +SA + P    W      EVPEDKC    H
Sbjct: 174 SSAISFPAIVWWRAVRTEEVPEDKCPFTEH 203


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)

Query: 80  TSTENSTTALKMWALERNC 98
           T+T  + T  ++WA++R C
Sbjct: 177 TATITAATDCQLWAIDRQC 195


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 6/10 (60%), Positives = 7/10 (70%)

Query: 98  CTKHCEPGCI 107
           C K C PGC+
Sbjct: 63  CIKICAPGCV 72


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 6/10 (60%), Positives = 7/10 (70%)

Query: 98  CTKHCEPGCI 107
           C K C PGC+
Sbjct: 63  CIKICAPGCV 72


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/31 (25%), Positives = 17/31 (54%)

Query: 33   NNELWCYKCLAEVPEDKCADLRHNNSDLIHK 63
            ++E W  K +A  P DK A+ +    +++ +
Sbjct: 1150 DSENWTPKMMAVEPTDKQANSKTRRQEMMRE 1180


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.324    0.133    0.432 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,612
Number of Sequences: 429
Number of extensions: 2203
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 153
length of database: 140,377
effective HSP length: 53
effective length of query: 100
effective length of database: 117,640
effective search space: 11764000
effective search space used: 11764000
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 40 (20.2 bits)