Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002476-TA|BGIBMGA002476-PA|undefined
(441 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0947 + 9399366-9399568,9399683-9399855,9400745-9401130,940... 36 0.085
01_06_0705 + 31342236-31342415,31343086-31343391,31343555-313437... 33 0.34
02_01_0665 + 4944756-4945151,4946758-4947259,4947909-4947979,494... 33 0.60
03_05_0145 + 21254448-21255488 32 1.1
01_06_0554 + 30179641-30179658,30179725-30180126,30180580-301808... 30 3.2
08_02_0829 - 21604845-21605588 30 4.2
08_01_0882 - 8663006-8663068,8663260-8663328,8663410-8663515,866... 29 5.6
03_05_1166 - 30876802-30876899,30877233-30878685 29 7.4
03_02_0856 - 11815684-11815701,11816019-11816194,11817878-11818670 29 7.4
01_06_1552 - 38207832-38207875,38207913-38208085,38208259-382084... 29 7.4
01_03_0184 + 13560830-13562981,13563604-13564088 29 7.4
08_02_1437 - 27096364-27097252,27098931-27099022,27099382-270996... 29 9.8
08_02_0830 - 21617485-21618198 29 9.8
07_01_0973 - 8193002-8193261,8193388-8193485,8194117-8194401,819... 29 9.8
04_04_1197 + 31672019-31672325,31672431-31672740,31673334-316783... 29 9.8
03_03_0065 + 14192725-14192813,14193004-14193088,14193971-141940... 29 9.8
02_02_0317 + 8893593-8894207 29 9.8
02_01_0279 - 1860410-1860508,1861536-1861889,1862660-1862805,186... 29 9.8
01_01_0258 - 2101298-2101600 29 9.8
>08_01_0947 +
9399366-9399568,9399683-9399855,9400745-9401130,
9401791-9402090,9402177-9402266,9403213-9403336,
9403452-9403615,9404572-9404802
Length = 556
Score = 35.5 bits (78), Expect = 0.085
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 96 FLATLSQAPPQPGGRRHSVVT-ISRVPQALFGRGRRESIAAFPALGRRRDSGSKKGPP-A 153
+L T ++APP P R S + +S P +L RGRR + A+ A RRR + P A
Sbjct: 11 WLPTRARAPPPPPPRAPSSASPVSGAPASLRFRGRRAASASASAARRRRGASLPCSPRCA 70
Query: 154 IETFG 158
+ET G
Sbjct: 71 LETAG 75
>01_06_0705 +
31342236-31342415,31343086-31343391,31343555-31343796,
31343927-31344122,31344419-31344602,31344984-31345147,
31345454-31345981,31346530-31346630,31347619-31347634,
31347834-31347941,31348028-31348078,31349059-31349100,
31349442-31349541,31350039-31350256,31350367-31350807,
31350916-31351043,31351131-31351992
Length = 1288
Score = 33.5 bits (73), Expect = 0.34
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 7/97 (7%)
Query: 347 VWDKPSGSVVDASALGSAIEVFLRKSSIVDSGPSTSSVVETKEITAKTRD------VPPK 400
VWD + SV+ L S + + S+ D PS+S V T E ++ + D +
Sbjct: 526 VWDFGAKSVLHLKLLFSRVPGCTIRRSVWDHSPSSSLVHRTDEASSSSSDNAKLVKIVDM 585
Query: 401 ARDKPGPSRAAERWYS-NKPEEEEVSESCDASLCTSL 436
GP A W K E +++ S D +C+++
Sbjct: 586 TETLKGPQDAPGHWLMFGKVEAQQLLWSIDLQICSAI 622
>02_01_0665 +
4944756-4945151,4946758-4947259,4947909-4947979,
4948039-4948239
Length = 389
Score = 32.7 bits (71), Expect = 0.60
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 370 RKSSIVDSGPSTSSVVETKEITAKTR-DVPPKARDKPGPSRAAERWYSNKPEEEEVSES 427
R ++++ G ST +I R D PP RD PG +RA R+ + + + +SES
Sbjct: 33 RVTAVIVFGDSTVDTGNNNQIGTPLRSDFPPYGRDMPGGARATGRFGNGRLAPDFMSES 91
>03_05_0145 + 21254448-21255488
Length = 346
Score = 31.9 bits (69), Expect = 1.1
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 386 ETKEITAKTRDVPPKARDKPGPSRAAERWYSNKPEEEEVSESCDASLCTSLK 437
E KE+ ++T P +R +P P E + EEEEVSES + T+ K
Sbjct: 45 EVKEVLSET--AVPVSRPRPPPEPEKEVVKRKEEEEEEVSESASVASATAEK 94
>01_06_0554 +
30179641-30179658,30179725-30180126,30180580-30180892,
30180966-30181358,30181442-30182427
Length = 703
Score = 30.3 bits (65), Expect = 3.2
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 46 PPDPYHLSPWRETRKHSLPTPQCTSGP 72
PPD Y+ SP E+RK SL P+ ++ P
Sbjct: 257 PPDDYYSSPILESRKCSLEEPKLSNQP 283
>08_02_0829 - 21604845-21605588
Length = 247
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 398 PPKARDKPGPSRAAERWYSNKPEEEEVSESCDAS 431
PP + KPG + A ERW ++K V+ S +S
Sbjct: 49 PPASNPKPGRADAVERWDAHKKPGYSVASSSSSS 82
>08_01_0882 -
8663006-8663068,8663260-8663328,8663410-8663515,
8663889-8663944,8664163-8664222,8664310-8664529,
8664561-8664655,8664757-8664882,8664954-8665008,
8666163-8666290
Length = 325
Score = 29.5 bits (63), Expect = 5.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 21 SGVEDAESSPKATIPLRGISIDQESPPD 48
+ VED SS T+P + IDQ+S PD
Sbjct: 58 AAVEDGSSSNTDTVPTPKVIIDQDSDPD 85
>03_05_1166 - 30876802-30876899,30877233-30878685
Length = 516
Score = 29.1 bits (62), Expect = 7.4
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 398 PPKARDKPGPSRAAERWYSNKPEEEEVSESCDASLCTSLK 437
PP R+K P+ + E W++ KP S+ AS C +K
Sbjct: 228 PPPPREKMYPNPSGEPWHTRKP---RFSKETPASFCHHVK 264
>03_02_0856 - 11815684-11815701,11816019-11816194,11817878-11818670
Length = 328
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 7/81 (8%)
Query: 308 WFARRHQTLATKNQENEPKKAKVTFAADSK-------PAPGDVATVVWDKPSGSVVDASA 360
WF R + ++ + A AA S PA ATV P G+VV A
Sbjct: 90 WFQNRRSRSRRRQRQMQAAAAAAAAAASSSSPSANTSPAAASAATVQVGLPPGAVVHTMA 149
Query: 361 LGSAIEVFLRKSSIVDSGPST 381
+G + + +++S S ST
Sbjct: 150 MGGSACQYEQQASSSSSSGST 170
>01_06_1552 -
38207832-38207875,38207913-38208085,38208259-38208417,
38209103-38209923
Length = 398
Score = 29.1 bits (62), Expect = 7.4
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 121 PQALFGRGRRESIAAFPALGRRRDSGSKKGPPAIETFGSTHNLQLDIMDDIVQARKVRMR 180
P LF G LG +S K A+ET+ S ++D+ V R
Sbjct: 268 PSKLFDMGCYFEAGGLLKLGTSINSAFKM---ALETWASWVKEKVDLKRTHVFFRTYEPS 324
Query: 181 LWNTSNERVCEV 192
W+ SN++VCEV
Sbjct: 325 HWSGSNQKVCEV 336
>01_03_0184 + 13560830-13562981,13563604-13564088
Length = 878
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 105 PQPGGRRHSVVTISRVPQALFGRGRRESIAAFPALGRRRDSGSKKG 150
P+ G RRH V S +PQ GR ++ A A+ RRR SG + G
Sbjct: 834 PRHGPRRHPV---SPLPQRHTGRAGPDADEAQLAVRRRRGSGRRAG 876
>08_02_1437 -
27096364-27097252,27098931-27099022,27099382-27099654,
27099872-27100819
Length = 733
Score = 28.7 bits (61), Expect = 9.8
Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Query: 260 NALTSSATEIDRCGKPERPGMRRLSDNMRSSSFDASSLR-EKPAESGTTWFARRHQTLAT 318
N L+++ + I+ K R ++ + D+ + + EK +E+ +T RR +
Sbjct: 267 NLLSNTMSSIESGPKALRRSWEGNAEAKSKGNSDSKAAKTEKKSENRSTSTPRRKPLVEE 326
Query: 319 KNQENEPKKAKVTFAADSKPAPGDVATVVWDKPSGSVVDASALGS 363
K + K + S AP D + + +KPS + S + S
Sbjct: 327 KPLHKDDSKIQTPPRKSSASAPSDDSEKIVNKPSSPLRRTSGVSS 371
>08_02_0830 - 21617485-21618198
Length = 237
Score = 28.7 bits (61), Expect = 9.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 398 PPKARDKPGPSRAAERWYSNKPEEEEVSESCDASLCTSL 436
PP + KPG + A ERW + K + S +S + L
Sbjct: 49 PPASDPKPGRADAVERWDARKEAGSSAASSSSSSSSSGL 87
>07_01_0973 -
8193002-8193261,8193388-8193485,8194117-8194401,
8195559-8195773,8196549-8197058
Length = 455
Score = 28.7 bits (61), Expect = 9.8
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 366 EVFLRKSSIVDSGPSTSSVVETKEITAKTRDVPPKARDKPGPSRAAE 412
EV R ++V S PS S + + ++ PP A P P+RAAE
Sbjct: 104 EVERRVDAVVQSKPSVSPLPSSADVKR-----PPAAESAPEPARAAE 145
>04_04_1197 +
31672019-31672325,31672431-31672740,31673334-31678335,
31678677-31678715
Length = 1885
Score = 28.7 bits (61), Expect = 9.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 125 FGRGRRESIAAFPALGRRRDSGSKKGPPAIETFGST--HNLQLDIMDDIVQARK 176
FG + +S LG++ S K P A +T GS NL +D D I+++ +
Sbjct: 498 FGNDKHDSSPGLQVLGKQIASELKGNPLAAKTVGSLLGTNLTIDHWDSIIKSEE 551
>03_03_0065 +
14192725-14192813,14193004-14193088,14193971-14194040,
14194730-14194827,14194931-14195101,14196192-14196224,
14196762-14196820,14197143-14197190,14197399-14197480,
14198317-14198475,14199036-14199093,14199801-14199949,
14200403-14200503,14200574-14200643,14201088-14201147,
14201883-14201939,14202247-14202315,14202485-14202562,
14202996-14203097,14203203-14203274,14203361-14203648
Length = 665
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 321 QENEPKKAKVTFAADSKPAPGDVATVVWDKPSGSVVDASALGSAIEVFLRKSSIVDSGPS 380
QE E KKA+ F PG+++ V +P G+ D + G A R + ++ P
Sbjct: 570 QETE-KKARKQFKGLFDKKPGEISEVGVGEPEGNKTDTTGSGEAASTADRDTDAKEAIPR 628
Query: 381 TSSVVETKE 389
S + +E
Sbjct: 629 ADSGLAFEE 637
>02_02_0317 + 8893593-8894207
Length = 204
Score = 28.7 bits (61), Expect = 9.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 271 RCGKPERPGMRRLSDNMRSSSFDASSLREKPAESGTTWFAR 311
RCG+ RPG R +D +S+ + E ESG+ W R
Sbjct: 79 RCGRRWRPGGGRDTDPHSPTSWRLDPVGEAGEESGSRWGRR 119
>02_01_0279 -
1860410-1860508,1861536-1861889,1862660-1862805,
1862885-1862925,1863010-1863173,1863217-1863281,
1863410-1863670,1863754-1863817,1863946-1864006,
1864112-1864473
Length = 538
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 356 VDASALGSAIEVFLRKSSIVDSGPSTSSVVETK 388
VD +LG+AI +R + + DSGP +S+ E K
Sbjct: 458 VDIFSLGAAIYELIRGTQLPDSGPQFTSLREGK 490
>01_01_0258 - 2101298-2101600
Length = 100
Score = 28.7 bits (61), Expect = 9.8
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 376 DSGPSTSSVVETKEITAK---TRDVPPKARDKPGPSRAAERWYSNKPEEEEVSESCDAS 431
++G ++ V K +TA TRDV +A D+P P A S ++ V + DA+
Sbjct: 30 ETGRKANNDVARKPVTAAAAATRDVYGRAADQPSPKPPAAARNSKVADDTGVKQPADAA 88
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.128 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,393,644
Number of Sequences: 37544
Number of extensions: 570640
Number of successful extensions: 1451
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1441
Number of HSP's gapped (non-prelim): 21
length of query: 441
length of database: 14,793,348
effective HSP length: 84
effective length of query: 357
effective length of database: 11,639,652
effective search space: 4155355764
effective search space used: 4155355764
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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