Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002476-TA|BGIBMGA002476-PA|undefined
(441 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 34 0.26
SB_44767| Best HMM Match : WD40 (HMM E-Value=0.074) 32 1.1
SB_59367| Best HMM Match : VWA (HMM E-Value=0) 32 1.1
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 31 1.9
SB_7210| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_40106| Best HMM Match : DUF701 (HMM E-Value=3.6) 31 2.5
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.5
SB_9533| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.3
SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019) 30 4.3
SB_32226| Best HMM Match : PID (HMM E-Value=3.9e-30) 30 4.3
SB_52825| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_45675| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 29 7.5
SB_38379| Best HMM Match : GspM (HMM E-Value=1.4) 29 7.5
SB_49107| Best HMM Match : Enterotoxin_HS (HMM E-Value=3.7) 29 7.5
SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7) 29 7.5
SB_49686| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.9
SB_35009| Best HMM Match : Phe_tRNA-synt_N (HMM E-Value=4) 29 9.9
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 29 9.9
SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5) 29 9.9
>SB_40551| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 1269
Score = 33.9 bits (74), Expect = 0.26
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 20 ESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSLPTP 66
+S D+ES+ T+P +G S D E PP P R T++ P+P
Sbjct: 286 QSPEPDSESNSSPTLPRQGSS-DSEPPPQPAKQESNRRTKQEGTPSP 331
>SB_44767| Best HMM Match : WD40 (HMM E-Value=0.074)
Length = 532
Score = 31.9 bits (69), Expect = 1.1
Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 7/125 (5%)
Query: 279 GMRRLSDNMRSSSFDASSLREKPAES-GTTWFARRHQTLATKNQENEPKKAKVTFAADSK 337
GM+ +D +S S L TTW T + E + + + S+
Sbjct: 166 GMQTFNDAPKSKEVQTSKLELFDMGCMATTWDMYDTYTSDETTTKEEKPETEEKLESLSR 225
Query: 338 PAPGDVATVVWDKPSGSVVDASA----LGSAIEVFLRKSSIVDSGPSTSSVVE--TKEIT 391
P G+ + D SGSV +SA GS +F K+S +D PS E +EI
Sbjct: 226 PVSGEKGSSHEDSESGSVRPSSASSSIAGSRASMFTFKTSSLDDEPSGEKDNEKNAEEIA 285
Query: 392 AKTRD 396
+ +D
Sbjct: 286 EEMKD 290
>SB_59367| Best HMM Match : VWA (HMM E-Value=0)
Length = 847
Score = 31.9 bits (69), Expect = 1.1
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Query: 327 KAKVTFAADSKPAPGDVATVVWDKPSGSVVDASALGSAIEVFLRKSSI-VDSGPSTSSVV 385
KAK F DS+P V V+ DK SG D L + V I V GP +V
Sbjct: 68 KAKALFTRDSRPNVRKVLVVITDKGSGHDEDDIKLAAKALVTSGVQVIPVAFGPDDGELV 127
Query: 386 ETKEITAKTRDVPPKARDKPGPSRAAERWYSNKPEEE 422
I +D+ K +D+ P +AE+ + E E
Sbjct: 128 ---AIAGNKKDI-VKTKDEDEPITSAEKVMTTIIESE 160
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 31.1 bits (67), Expect = 1.9
Identities = 47/172 (27%), Positives = 70/172 (40%), Gaps = 24/172 (13%)
Query: 260 NALTSSAT-EIDRCGKPERPGMRRLSDNMRSSSFDASSLREK----PAESGTTWFARRHQ 314
NA+ A E +R G+P +L + + +++ A+++ A S TT +
Sbjct: 1555 NAVEDEAKPESERSGEPADE--HKLKEAVAAAAVTATAVATTGAAVAAASATTKGKSPSK 1612
Query: 315 TLATK-NQENEPKKAKVTFAADSKPAPGDVATVVWDKPSGSVVDASALGSAIEVFLRKSS 373
T ATK PK AK S PG A KP + A + E K+
Sbjct: 1613 TSATKATHAKNPKSAK---PGSSSTKPGTSA-----KPGAATAKPGAASAKPEAVPAKTG 1664
Query: 374 IVD--SGPSTSSVVETKE--ITAKTRDVPPKA-RDKPGPSRAAERWYSNKPE 420
SGPS + TK ++AKT + P + +P + AE NKPE
Sbjct: 1665 AASTKSGPSAAKPGSTKSGTLSAKTGEPPSRTPASRPALQKKAE---ENKPE 1713
>SB_7210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 869
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 24 EDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSL 63
E P A+I + +S+ QE P P ++ E R HSL
Sbjct: 518 ESLADLPSASIQMLNLSVSQEEGPQPVPMNSSAEQRSHSL 557
>SB_40106| Best HMM Match : DUF701 (HMM E-Value=3.6)
Length = 69
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 194 PLDERSPISGSVRYTNRGRRHSDFVGSPLPPI 225
P+D+R P S SV Y +RG+ + F+ SP+ P+
Sbjct: 28 PVDKRLPFS-SVSYRSRGQALTFFLASPVSPV 58
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 30.7 bits (66), Expect = 2.5
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 243 RSNTGVVCTDTDLHLMLNALTSSATEIDRCGKPERPGMRRLSDNMRSSSFDASSLREKPA 302
R + V TD +L A ++S+T KP + R +S N SSS SSL +
Sbjct: 2910 RKDNNKVSTDHELSPTF-AQSTSSTPKSVTDKPNQTSDRPMSRNSNSSSSRRSSLTPRND 2968
Query: 303 ESGTTWFARRHQTLATKNQENEPKKAKVTFAADS 336
+G+ R+Q + ++ + P++ +T DS
Sbjct: 2969 SNGSN--TSRYQPGSHLSKSSSPRRYSLTPRHDS 3000
>SB_9533| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 30.3 bits (65), Expect = 3.3
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 14 PLIVVEESGVEDAESSPKATIPLRGISIDQESPPDPYHLSP 54
P++V+ E + D A IP GI + E PP+ + +P
Sbjct: 338 PIVVIAEQFLRDFSGDAIAPIPFGGIFLPLECPPEQCYKNP 378
>SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019)
Length = 1136
Score = 29.9 bits (64), Expect = 4.3
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 153 AIETFGSTHNLQLDIMDDIVQARKVRMRLWNTSNERVCEVQPLDERSPISGSVRYTNRGR 212
+IE + H L+ +IVQARK +M+L T + E++ L E + T +G+
Sbjct: 173 SIEAERAAH-LETKFNSEIVQARKRQMQLDTTYGSSMRELEMLLENFQVEKPAEGTKKGQ 231
Query: 213 RHSDFVGSPLPPIPA 227
R PP PA
Sbjct: 232 RKD----KSKPPSPA 242
>SB_32226| Best HMM Match : PID (HMM E-Value=3.9e-30)
Length = 591
Score = 29.9 bits (64), Expect = 4.3
Identities = 31/136 (22%), Positives = 51/136 (37%), Gaps = 7/136 (5%)
Query: 306 TTWFARRHQTLATKNQENEPKKAKVTFAADSKPAPGDVATVVWDKPSGSVVDASALGSAI 365
T R+ + A + Q K+ + T D A + V ++ S S S
Sbjct: 233 TACLQRKQKAQALQQQAKAAKEGEKT---DGTQATSTAPSTVANQQQSSRAFVSTPSSVT 289
Query: 366 EVFLRKSSIVDSGPSTSSVVETKEITAKTRDVPPKARDKPGPSRAAERWYSNKPEEEEVS 425
+ ++ TSS T + T+ VPP + P +R+ + ++ P +S
Sbjct: 290 SASSVVNGPTETSGMTSSPSSTAPVVTTTQQVPPALKPPPAAARSRPQPFAPSPFTRHMS 349
Query: 426 ---ESCDASLCTSLKD 438
S SL T LKD
Sbjct: 350 LRYRSTPMSL-TPLKD 364
>SB_52825| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1141
Score = 29.5 bits (63), Expect = 5.7
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 375 VDSGPSTSSVVETKEITAKTRDVPPKARDKPGPSRAAERWYSNKPEEEE 423
V+ G S +TKEIT+KT K +DK G + +R +K +E+
Sbjct: 954 VNEGKSEGERKKTKEITSKT---TKKVKDKKGKDKTTKRSSKDKETKEK 999
>SB_45675| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 29.5 bits (63), Expect = 5.7
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 321 QENEPKKAKVTFAADSKPAPGDVATVVWDKPSGSVVDASALGSAIEVFLRKSSIVDSGPS 380
++N+ KK +F S+ + V K V + ++LGS +VF ++ S
Sbjct: 44 KKNKKKKTSCSFCGRSEGNLCQTLSAVVQKHLDPVANETSLGSTPKVFFTAEVRPENSSS 103
Query: 381 TSSVVETKEITAKTRDVPPKARDKP 405
+ ++E I A D+ RD P
Sbjct: 104 NTKLLEFWPINAGYADLWSIVRDAP 128
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 29.1 bits (62), Expect = 7.5
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Query: 329 KVTFAADSKPAPGD--VATVVWDKPSGSVVDASALGSAIEVFLRKSSIVDSGPSTSSVVE 386
+VT +A PA D V D PS S D SAI+V + V S
Sbjct: 686 QVTPSASDVPAASDNQVTPSASDVPSAS--DDQVTPSAIDVPTTSDNQVTPSASDVPTAS 743
Query: 387 TKEITAKTRDVPPKARDKPGPS 408
++T DVP + D+ PS
Sbjct: 744 DDQVTPSASDVPTTSDDQVTPS 765
>SB_38379| Best HMM Match : GspM (HMM E-Value=1.4)
Length = 697
Score = 29.1 bits (62), Expect = 7.5
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 379 PSTSSVVETKEITAKTRDVPPKARDKPGPSRAAER--WYSNKPEEEEVSES 427
PS E T+ + D PP+ RD P +++ +R W++ K + ES
Sbjct: 565 PSPIPPPEGIATTSTSEDPPPRLRDSPSGNKSKKRHSWFAGKKDSFSDGES 615
>SB_49107| Best HMM Match : Enterotoxin_HS (HMM E-Value=3.7)
Length = 254
Score = 29.1 bits (62), Expect = 7.5
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 361 LGSAIEVFLRKSSIVDSGPSTSSVVETKEITAKTRDVPPKARDKP-GPSRAAERWYSNKP 419
L +AIE ++ S D+ ST S + ++IT + P KP S + ++ Y
Sbjct: 57 LEAAIEASIKDSHSDDASQSTPSARQPEKITKEISKAKPGPEGKPDSESSSDDQSYKEDE 116
Query: 420 EEEEVS----ESCDASLCTSLKD 438
E E+ + ++ AS C + K+
Sbjct: 117 ENEDFTTNKKDTQIASACKATKE 139
>SB_43512| Best HMM Match : RNA_pol_delta (HMM E-Value=4.7)
Length = 241
Score = 29.1 bits (62), Expect = 7.5
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 377 SGPSTSSVVETKEITAK--TRDVPPKARDKPGPSRAAERWYSNKPEEEEVSESCDAS 431
+ P + + + KE AK T PKA D P + E + P E+E SE D S
Sbjct: 45 ASPESENTDDFKEPEAKEETPAAAPKAEDTPALETSGESKLPDTPVEDEESEDDDDS 101
>SB_49686| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 28.7 bits (61), Expect = 9.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 16 IVVEESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRK 60
I +++S D+++ ++ I L SID SPP P + P T +
Sbjct: 232 ISLDKSDYSDSDTIAESDIDLMTPSIDISSPPPPLRIDPLVTTHR 276
>SB_35009| Best HMM Match : Phe_tRNA-synt_N (HMM E-Value=4)
Length = 271
Score = 28.7 bits (61), Expect = 9.9
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 25 DAESSPKATIPLRGISI-DQESPPDPYHLSP-WRETRK 60
+ S PK IP R I DQE+PP Y +P W +R+
Sbjct: 232 EGPSHPKDPIPERKPQINDQEAPPSSYRKTPVWFSSRE 269
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 28.7 bits (61), Expect = 9.9
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 380 STSSVVETKEITAKTRDVPPKARDKPGPSRAAERWYSNKPEEEEVSESCDASLCT 434
S S ++ + KT+ P+ +DK P + +NKP+ ++ S AS T
Sbjct: 484 SRKSKARPRQASRKTKTSKPQDQDKQDPRPRQKSRKTNKPQHKQASRPRQASHMT 538
>SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5)
Length = 279
Score = 28.7 bits (61), Expect = 9.9
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 343 VATVVWDKPSGSVVDASALGSAIEVFLRKSSIVDSGPSTSSVVETKEITAKTRDVPPKAR 402
VAT + SV+ ASA GS I K++ D T V T + ++TR
Sbjct: 36 VATTSVVMVTTSVIPASASGSTITPTPSKTNSFDVLTMTKVVFRTMRV-SQTRSSSSSQS 94
Query: 403 DKPGPSRAAERWYSNKPEEEEVSES 427
P PS +++ S+ P S+S
Sbjct: 95 LPPPPSLSSQTSSSSPPPSSSSSQS 119
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.313 0.128 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,753,250
Number of Sequences: 59808
Number of extensions: 607634
Number of successful extensions: 1542
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1530
Number of HSP's gapped (non-prelim): 25
length of query: 441
length of database: 16,821,457
effective HSP length: 84
effective length of query: 357
effective length of database: 11,797,585
effective search space: 4211737845
effective search space used: 4211737845
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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