Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002476-TA|BGIBMGA002476-PA|undefined
(441 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC035668-1|AAH35668.1| 685|Homo sapiens OTUD7A protein protein. 33 2.0
AJ430383-1|CAD23047.1| 926|Homo sapiens Cezanne 2 protein protein. 33 2.0
BC117134-1|AAI17135.1| 1709|Homo sapiens chromodomain helicase D... 33 2.7
AF107840-1|AAD53401.1| 468|Homo sapiens nuclear pore-associated... 33 2.7
AF006513-1|AAB87381.1| 1709|Homo sapiens CHD1 protein. 33 2.7
Z82243-1|CAI17926.1| 468|Homo sapiens nucleoporin 50kDa protein. 32 3.5
CR456533-1|CAG30419.1| 468|Homo sapiens NUP50 protein. 32 3.5
BC070133-1|AAH70133.1| 468|Homo sapiens nucleoporin 50kDa protein. 32 3.5
BC028125-1|AAH28125.1| 440|Homo sapiens nucleoporin 50kDa protein. 32 3.5
BC016055-1|AAH16055.1| 440|Homo sapiens NUP50 protein protein. 32 3.5
AL008718-1|CAI17944.1| 468|Homo sapiens nucleoporin 50kDa protein. 32 3.5
U06631-1|AAA16607.1| 597|Homo sapiens H326 protein. 31 8.1
BC111063-1|AAI11064.1| 273|Homo sapiens WDR42A protein protein. 31 8.1
BC099846-1|AAH99846.1| 597|Homo sapiens WD repeat domain 42A pr... 31 8.1
BC099709-1|AAH99709.1| 597|Homo sapiens WD repeat domain 42A pr... 31 8.1
BC098271-1|AAH98271.1| 597|Homo sapiens WD repeat domain 42A pr... 31 8.1
BC080597-1|AAH80597.1| 273|Homo sapiens WDR42A protein protein. 31 8.1
BC013107-1|AAH13107.1| 273|Homo sapiens WDR42A protein protein. 31 8.1
AL139011-3|CAI15994.1| 212|Homo sapiens WD repeat domain 42A pr... 31 8.1
AL139011-1|CAI15993.1| 597|Homo sapiens WD repeat domain 42A pr... 31 8.1
AK223475-1|BAD97195.1| 597|Homo sapiens H326 variant protein. 31 8.1
>BC035668-1|AAH35668.1| 685|Homo sapiens OTUD7A protein protein.
Length = 685
Score = 33.1 bits (72), Expect = 2.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 14 PLIVVEESGVEDAESSPKATIPLRGISIDQESPPDPYHLSP 54
P++VV ++ + D+ A IP GI + E PP+ H SP
Sbjct: 325 PIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPPNRCHCSP 365
>AJ430383-1|CAD23047.1| 926|Homo sapiens Cezanne 2 protein protein.
Length = 926
Score = 33.1 bits (72), Expect = 2.0
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 14 PLIVVEESGVEDAESSPKATIPLRGISIDQESPPDPYHLSP 54
P++VV ++ + D+ A IP GI + E PP+ H SP
Sbjct: 318 PIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPPNRCHCSP 358
>BC117134-1|AAI17135.1| 1709|Homo sapiens chromodomain helicase DNA
binding protein 1 protein.
Length = 1709
Score = 32.7 bits (71), Expect = 2.7
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Query: 297 LREKPAESGTTWFARRHQTLATKNQENEPKKAKVTFAADSKPAPGDVATVVWDKPSGSVV 356
L +K A SG ++R + A KN+ + K K +DS P P + + DK S S
Sbjct: 1317 LAKKEALSGAG-SSKRRKARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKLSESKS 1375
Query: 357 DASALGSAIEVFLRKSSIVDSGPSTSSVVETKEITAKTRDVPPKARDKPGPSRAAERWYS 416
D V I SG E++E+ KT + +++ P +AA +
Sbjct: 1376 DGRERSKKSSVSDAPVHITASGEPVPISEESEELDQKTFSI---CKERMRPVKAALK-QL 1431
Query: 417 NKPEE 421
++PE+
Sbjct: 1432 DRPEK 1436
>AF107840-1|AAD53401.1| 468|Homo sapiens nuclear pore-associated
protein protein.
Length = 468
Score = 32.7 bits (71), Expect = 2.7
Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 4/145 (2%)
Query: 286 NMRSSSFDASSLREKPAESGTTWFARRHQTLATKNQENEPKKAKVTFAADSKPAPGDVAT 345
N S S ++ + P+ G+T + L N+ + K+ A++ K P +
Sbjct: 207 NSESESNKVAAETQSPSLFGSTKLQQESSFLFHGNKTEDTPDKKMEVASEKKTDPSSLGA 266
Query: 346 VVWDKPSGSVVDASALGSAIEVFLRKSSIVDSGPST--SSVVETKEITA--KTRDVPPKA 401
G VD+S LGS V L S S ++K +++ T+ + +A
Sbjct: 267 TSASFNFGKKVDSSVLGSLSSVPLTGFSFSPGNSSLFGKDTTQSKPVSSPFPTKPLEGQA 326
Query: 402 RDKPGPSRAAERWYSNKPEEEEVSE 426
G + + +++P + V+E
Sbjct: 327 EGDSGECKGGDEEENDEPPKVVVTE 351
>AF006513-1|AAB87381.1| 1709|Homo sapiens CHD1 protein.
Length = 1709
Score = 32.7 bits (71), Expect = 2.7
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Query: 297 LREKPAESGTTWFARRHQTLATKNQENEPKKAKVTFAADSKPAPGDVATVVWDKPSGSVV 356
L +K A SG ++R + A KN+ + K K +DS P P + + DK S S
Sbjct: 1317 LAKKEALSGAG-SSKRRKARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKLSESKS 1375
Query: 357 DASALGSAIEVFLRKSSIVDSGPSTSSVVETKEITAKTRDVPPKARDKPGPSRAAERWYS 416
D V I SG E++E+ KT + +++ P +AA +
Sbjct: 1376 DGRERSKKSSVSDAPVHITASGEPVPISEESEELDQKTFSI---CKERMRPVKAALK-QL 1431
Query: 417 NKPEE 421
++PE+
Sbjct: 1432 DRPEK 1436
>Z82243-1|CAI17926.1| 468|Homo sapiens nucleoporin 50kDa protein.
Length = 468
Score = 32.3 bits (70), Expect = 3.5
Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 4/145 (2%)
Query: 286 NMRSSSFDASSLREKPAESGTTWFARRHQTLATKNQENEPKKAKVTFAADSKPAPGDVAT 345
N S S ++ + P+ G+T + L N+ + K+ A++ K P +
Sbjct: 207 NSESESNKVAAETQSPSLFGSTKLQQESTFLFHGNKTEDTPDKKMEVASEKKTDPSSLGA 266
Query: 346 VVWDKPSGSVVDASALGSAIEVFLRKSSIVDSGPST--SSVVETKEITA--KTRDVPPKA 401
G VD+S LGS V L S S ++K +++ T+ + +A
Sbjct: 267 TSASFNFGKKVDSSVLGSLSSVPLTGFSFSPGNSSLFGKDTTQSKPVSSPFPTKPLEGQA 326
Query: 402 RDKPGPSRAAERWYSNKPEEEEVSE 426
G + + +++P + V+E
Sbjct: 327 EGDSGECKGGDEEENDEPPKVVVTE 351
>CR456533-1|CAG30419.1| 468|Homo sapiens NUP50 protein.
Length = 468
Score = 32.3 bits (70), Expect = 3.5
Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 4/145 (2%)
Query: 286 NMRSSSFDASSLREKPAESGTTWFARRHQTLATKNQENEPKKAKVTFAADSKPAPGDVAT 345
N S S ++ + P+ G+T + L N+ + K+ A++ K P +
Sbjct: 207 NSESESNKVAAETQSPSLFGSTKLQQESTFLFHGNKTEDTPDKKMEVASEKKTDPSSLGA 266
Query: 346 VVWDKPSGSVVDASALGSAIEVFLRKSSIVDSGPST--SSVVETKEITA--KTRDVPPKA 401
G VD+S LGS V L S S ++K +++ T+ + +A
Sbjct: 267 TSASFNFGKKVDSSVLGSLSSVPLTGFSFSPGNSSLFGKDTTQSKPVSSPFPTKPLEGQA 326
Query: 402 RDKPGPSRAAERWYSNKPEEEEVSE 426
G + + +++P + V+E
Sbjct: 327 EGDSGECKGGDEEENDEPPKVVVTE 351
>BC070133-1|AAH70133.1| 468|Homo sapiens nucleoporin 50kDa protein.
Length = 468
Score = 32.3 bits (70), Expect = 3.5
Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 4/145 (2%)
Query: 286 NMRSSSFDASSLREKPAESGTTWFARRHQTLATKNQENEPKKAKVTFAADSKPAPGDVAT 345
N S S ++ + P+ G+T + L N+ + K+ A++ K P +
Sbjct: 207 NSESESNKVAAETQSPSLFGSTKLQQESTFLFHGNKTEDTPDKKMEVASEKKTDPSSLGA 266
Query: 346 VVWDKPSGSVVDASALGSAIEVFLRKSSIVDSGPST--SSVVETKEITA--KTRDVPPKA 401
G VD+S LGS V L S S ++K +++ T+ + +A
Sbjct: 267 TSASFNFGKKVDSSVLGSLSSVPLTGFSFSPGNSSLFGKDTTQSKPVSSPFPTKPLEGQA 326
Query: 402 RDKPGPSRAAERWYSNKPEEEEVSE 426
G + + +++P + V+E
Sbjct: 327 EGDSGECKGGDEEENDEPPKVVVTE 351
>BC028125-1|AAH28125.1| 440|Homo sapiens nucleoporin 50kDa protein.
Length = 440
Score = 32.3 bits (70), Expect = 3.5
Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 4/145 (2%)
Query: 286 NMRSSSFDASSLREKPAESGTTWFARRHQTLATKNQENEPKKAKVTFAADSKPAPGDVAT 345
N S S ++ + P+ G+T + L N+ + K+ A++ K P +
Sbjct: 179 NSESESNKVAAETQSPSLFGSTKLQQESTFLFHGNKTEDTPDKKMEVASEKKTDPSSLGA 238
Query: 346 VVWDKPSGSVVDASALGSAIEVFLRKSSIVDSGPST--SSVVETKEITA--KTRDVPPKA 401
G VD+S LGS V L S S ++K +++ T+ + +A
Sbjct: 239 TSASFNFGKKVDSSVLGSLSSVPLTGFSFSPGNSSLFGKDTTQSKPVSSPFPTKPLEGQA 298
Query: 402 RDKPGPSRAAERWYSNKPEEEEVSE 426
G + + +++P + V+E
Sbjct: 299 EGDSGECKGGDEEENDEPPKVVVTE 323
>BC016055-1|AAH16055.1| 440|Homo sapiens NUP50 protein protein.
Length = 440
Score = 32.3 bits (70), Expect = 3.5
Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 4/145 (2%)
Query: 286 NMRSSSFDASSLREKPAESGTTWFARRHQTLATKNQENEPKKAKVTFAADSKPAPGDVAT 345
N S S ++ + P+ G+T + L N+ + K+ A++ K P +
Sbjct: 179 NSESESNKVAAETQSPSLFGSTKLQQESTFLFHGNKTEDTPDKKMEVASEKKTDPSSLGA 238
Query: 346 VVWDKPSGSVVDASALGSAIEVFLRKSSIVDSGPST--SSVVETKEITA--KTRDVPPKA 401
G VD+S LGS V L S S ++K +++ T+ + +A
Sbjct: 239 TSASFNFGKKVDSSVLGSLSSVPLTGFSFSPGNSSLFGKDTTQSKPVSSPFPTKPLEGQA 298
Query: 402 RDKPGPSRAAERWYSNKPEEEEVSE 426
G + + +++P + V+E
Sbjct: 299 EGDSGECKGGDEEENDEPPKVVVTE 323
>AL008718-1|CAI17944.1| 468|Homo sapiens nucleoporin 50kDa protein.
Length = 468
Score = 32.3 bits (70), Expect = 3.5
Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 4/145 (2%)
Query: 286 NMRSSSFDASSLREKPAESGTTWFARRHQTLATKNQENEPKKAKVTFAADSKPAPGDVAT 345
N S S ++ + P+ G+T + L N+ + K+ A++ K P +
Sbjct: 207 NSESESNKVAAETQSPSLFGSTKLQQESTFLFHGNKTEDTPDKKMEVASEKKTDPSSLGA 266
Query: 346 VVWDKPSGSVVDASALGSAIEVFLRKSSIVDSGPST--SSVVETKEITA--KTRDVPPKA 401
G VD+S LGS V L S S ++K +++ T+ + +A
Sbjct: 267 TSASFNFGKKVDSSVLGSLSSVPLTGFSFSPGNSSLFGKDTTQSKPVSSPFPTKPLEGQA 326
Query: 402 RDKPGPSRAAERWYSNKPEEEEVSE 426
G + + +++P + V+E
Sbjct: 327 EGDSGECKGGDEEENDEPPKVVVTE 351
>U06631-1|AAA16607.1| 597|Homo sapiens H326 protein.
Length = 597
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 19 EESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSLPTPQCTSGP 72
EE E+ E P+ + + DQ+S D L W + +LP P+ + P
Sbjct: 103 EEEEEEEEEEQPRGACTAQAANRDQDSSDDERALEDWVSSETSALPRPRWQALP 156
>BC111063-1|AAI11064.1| 273|Homo sapiens WDR42A protein protein.
Length = 273
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 19 EESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSLPTPQCTSGP 72
EE E+ E P+ + + + DQ+S D L W + +LP P+ + P
Sbjct: 103 EEEEEEEEEEQPRRRVQRKRANRDQDSSDDERALEDWVSSETSALPRPRWQALP 156
>BC099846-1|AAH99846.1| 597|Homo sapiens WD repeat domain 42A
protein.
Length = 597
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 19 EESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSLPTPQCTSGP 72
EE E+ E P+ + + + DQ+S D L W + +LP P+ + P
Sbjct: 103 EEEEEEEEEEQPRRRVQRKRANRDQDSSDDERALEDWVSSETSALPRPRWQALP 156
>BC099709-1|AAH99709.1| 597|Homo sapiens WD repeat domain 42A
protein.
Length = 597
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 19 EESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSLPTPQCTSGP 72
EE E+ E P+ + + + DQ+S D L W + +LP P+ + P
Sbjct: 103 EEEEEEEEEEQPRRRVQRKRANRDQDSSDDERALEDWVSSETSALPRPRWQALP 156
>BC098271-1|AAH98271.1| 597|Homo sapiens WD repeat domain 42A
protein.
Length = 597
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 19 EESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSLPTPQCTSGP 72
EE E+ E P+ + + + DQ+S D L W + +LP P+ + P
Sbjct: 103 EEEEEEEEEEQPRRRVQRKRTNRDQDSSDDERALEDWVSSETSALPRPRWQALP 156
>BC080597-1|AAH80597.1| 273|Homo sapiens WDR42A protein protein.
Length = 273
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 19 EESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSLPTPQCTSGP 72
EE E+ E P+ + + + DQ+S D L W + +LP P+ + P
Sbjct: 103 EEEEEEEEEEQPRRRVQRKRANRDQDSSDDERALEDWVSSETSALPRPRWQALP 156
>BC013107-1|AAH13107.1| 273|Homo sapiens WDR42A protein protein.
Length = 273
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 19 EESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSLPTPQCTSGP 72
EE E+ E P+ + + + DQ+S D L W + +LP P+ + P
Sbjct: 103 EEEEEEEEEEQPRRRVQRKRANRDQDSSDDERALEDWVSSETSALPRPRWQALP 156
>AL139011-3|CAI15994.1| 212|Homo sapiens WD repeat domain 42A
protein.
Length = 212
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 19 EESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSLPTPQCTSGP 72
EE E+ E P+ + + + DQ+S D L W + +LP P+ + P
Sbjct: 103 EEEEEEEEEEQPRRRVQRKRANRDQDSSDDERALEDWVSSETSALPRPRWQALP 156
>AL139011-1|CAI15993.1| 597|Homo sapiens WD repeat domain 42A
protein.
Length = 597
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 19 EESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSLPTPQCTSGP 72
EE E+ E P+ + + + DQ+S D L W + +LP P+ + P
Sbjct: 103 EEEEEEEEEEQPRRRVQRKRANRDQDSSDDERALEDWVSSETSALPRPRWQALP 156
>AK223475-1|BAD97195.1| 597|Homo sapiens H326 variant protein.
Length = 597
Score = 31.1 bits (67), Expect = 8.1
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 19 EESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSLPTPQCTSGP 72
EE E+ E P+ + + + DQ+S D L W + +LP P+ + P
Sbjct: 103 EEEEEEEEEEQPRRRVQRKRANRDQDSSDDERALEDWVSSETSALPRPRWQALP 156
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.313 0.128 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,994,917
Number of Sequences: 224733
Number of extensions: 2850962
Number of successful extensions: 6448
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 6436
Number of HSP's gapped (non-prelim): 21
length of query: 441
length of database: 73,234,838
effective HSP length: 92
effective length of query: 349
effective length of database: 52,559,402
effective search space: 18343231298
effective search space used: 18343231298
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 67 (31.1 bits)
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