Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002476-TA|BGIBMGA002476-PA|undefined
(441 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 36 0.075
Z81491-12|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 35 0.099
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 31 1.2
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 31 2.1
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 31 2.1
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 31 2.1
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 31 2.1
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 31 2.1
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 31 2.1
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 30 2.8
U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical pr... 30 3.7
U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical pr... 29 6.5
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 6.5
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 6.5
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 29 6.5
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 29 6.5
AC006792-1|AAF60741.2| 642|Caenorhabditis elegans Hypothetical ... 29 8.6
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 35.5 bits (78), Expect = 0.075
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Query: 333 AADSKPAPGDVATVVWDKPSGSVVDASALGSAIEVFLRKSSIVDSGPSTS-SVVETKEIT 391
AAD PAP A P+ +V + A A+E + + P+ + + E
Sbjct: 608 AADETPAPAPAAEET-PAPAPAVEETPAPAPAVEETPAPAPAAEETPAPAPAAAEYAAPV 666
Query: 392 AKTRDVP-PKARDKPGPSRAAERWYSNKPEEEEVSESCDAS 431
A+ P P A + P P++AAE + P EE S A+
Sbjct: 667 AEETPAPAPAAEETPAPAQAAEETPAPAPAAEETPASAPAA 707
>Z81491-12|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 35.1 bits (77), Expect = 0.099
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 338 PAPGDVATVVWDKPSGSVVDASALGSAIEVFLRKSSIVDSGPSTSSVVETKEITAKTRDV 397
PAP +T V D S ++ S + SS + P+TS+ T T T
Sbjct: 129 PAPTVTSTTVVDTSESSTSQSTTTPSTTTTII-VSSTTTTNPTTSTTPTTPTTTTPTTST 187
Query: 398 PPKAR---DKPGPSRAAERWYSNKPEEEEVSESCD 429
AR D P P E+W K ++ + D
Sbjct: 188 TTTARGTTDIPAPPSVVEKWCMKKLQKNNAQFTID 222
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 31.5 bits (68), Expect = 1.2
Identities = 41/171 (23%), Positives = 66/171 (38%), Gaps = 18/171 (10%)
Query: 281 RRLSDNMRSSSFDASSLREKPAESGTTWFARRHQTL--ATKNQENEPKKAK-VTFAADSK 337
RR +DN + F +S ++ +F RR QT+ + P++++ V +
Sbjct: 360 RRTTDNQKIEDFIQTSNVNIASQVLELYFKRRKQTMEGVLPERMKTPRESRLVKNEVEDA 419
Query: 338 PAPGDV------ATVVWDKP------SGSVVDASALGSAIEVFLRKSSIVDSGPSTSSVV 385
P P ++ WD P GS + + +E+ ++ D G S
Sbjct: 420 PTPSEIIRRAMEEATSWDPPENMATEEGSDPSPPRVYTPMEIEQESPALEDWGCREGS-- 477
Query: 386 ETKEITAKTRDVPPKARDKPGPSRAAERWYSNKP-EEEEVSESCDASLCTS 435
E E T +P P S +A + +P EEE S S D S TS
Sbjct: 478 ERSENLPSTSAIPMDTAPAPPASESARSSPAMEPATEEETSGSSDPSPSTS 528
Score = 29.9 bits (64), Expect = 3.7
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 288 RSSSFDASSLREKPAESGTTWFARRHQTLATKNQENEPKKAKVTFAADSKPAPGDVAT-V 346
+ SS + R+ A++ A+R A + ++ PKKA+ A SKP AT
Sbjct: 3 KKSSTSCQARRKAQAQTSVETVAKRRGRPAKEKKQPVPKKAEP--AKASKPRARKSATGN 60
Query: 347 VWDKPSGSVVDASALGSAIEVFLRKSSIVDSGPSTSSVVETKEI 390
+KP SV + + + ++ I P+TS+ +I
Sbjct: 61 KSEKPQASVAEQAGISQIPQLQHNNEVIGIEAPTTSAAPSRAQI 104
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 372 SSIVDSGPSTSSVVETKEITAKTRDVPPKARDKPGPSRAAERWYSNKPEEEEVSESCDAS 431
S+ +DS +T SV T+ +T+ + D PS + E S+ P + SES +S
Sbjct: 411 STTLDSSSTTGSVSSTESVTSDSSDSTTPLDVSSSPSESTES-QSSTPSDASSSESASSS 469
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 372 SSIVDSGPSTSSVVETKEITAKTRDVPPKARDKPGPSRAAERWYSNKPEEEEVSESCDAS 431
S+ +DS +T SV T+ +T+ + D PS + E S+ P + SES +S
Sbjct: 411 STTLDSSSTTGSVSSTESVTSDSSDSTTPLDVSSSPSESTES-QSSTPSDASSSESASSS 469
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 372 SSIVDSGPSTSSVVETKEITAKTRDVPPKARDKPGPSRAAERWYSNKPEEEEVSESCDAS 431
S+ +DS +T SV T+ +T+ + D PS + E S+ P + SES +S
Sbjct: 411 STTLDSSSTTGSVSSTESVTSDSSDSTTPLDVSSSPSESTES-QSSTPSDASSSESASSS 469
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 30.7 bits (66), Expect = 2.1
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 372 SSIVDSGPSTSSVVETKEITAKTRDVPPKARDKPGPSRAAERWYSNKPEEEEVSESCDAS 431
S+ +DS +T SV T+ +T+ + D PS + E S+ P + SES +S
Sbjct: 411 STTLDSSSTTGSVSSTESVTSDSSDSTTPLDVSSSPSESTES-QSSTPSDASSSESASSS 469
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 30.7 bits (66), Expect = 2.1
Identities = 30/132 (22%), Positives = 48/132 (36%), Gaps = 2/132 (1%)
Query: 311 RRHQTLATKNQENEPKKAKVTFAADSKPAPGDVATVVWD-KPSGSVVDASALGSAIEVFL 369
R +T A E EP + A+ +P P VA + +P+ A A +
Sbjct: 485 RTPKTPAVVEPEPEPVAEEPEPVAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETA 544
Query: 370 RKSSIVDSGPSTSSVVETKEITAKTRDVPPKARDK-PGPSRAAERWYSNKPEEEEVSESC 428
+ + ++ P K + PP AR P P A R S PE + S
Sbjct: 545 TEPTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRRPQSPSPERQRTSRHA 604
Query: 429 DASLCTSLKDLF 440
D + + +D +
Sbjct: 605 DRDITSYDEDSY 616
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 30.7 bits (66), Expect = 2.1
Identities = 30/132 (22%), Positives = 48/132 (36%), Gaps = 2/132 (1%)
Query: 311 RRHQTLATKNQENEPKKAKVTFAADSKPAPGDVATVVWD-KPSGSVVDASALGSAIEVFL 369
R +T A E EP + A+ +P P VA + +P+ A A +
Sbjct: 435 RTPKTPAVVEPEPEPVAEEPEPVAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETA 494
Query: 370 RKSSIVDSGPSTSSVVETKEITAKTRDVPPKARDK-PGPSRAAERWYSNKPEEEEVSESC 428
+ + ++ P K + PP AR P P A R S PE + S
Sbjct: 495 TEPTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRRPQSPSPERQRTSRHA 554
Query: 429 DASLCTSLKDLF 440
D + + +D +
Sbjct: 555 DRDITSYDEDSY 566
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 30.7 bits (66), Expect = 2.1
Identities = 30/132 (22%), Positives = 48/132 (36%), Gaps = 2/132 (1%)
Query: 311 RRHQTLATKNQENEPKKAKVTFAADSKPAPGDVATVVWD-KPSGSVVDASALGSAIEVFL 369
R +T A E EP + A+ +P P VA + +P+ A A +
Sbjct: 485 RTPKTPAVVEPEPEPVAEEPEPVAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETA 544
Query: 370 RKSSIVDSGPSTSSVVETKEITAKTRDVPPKARDK-PGPSRAAERWYSNKPEEEEVSESC 428
+ + ++ P K + PP AR P P A R S PE + S
Sbjct: 545 TEPTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRRPQSPSPERQRTSRHA 604
Query: 429 DASLCTSLKDLF 440
D + + +D +
Sbjct: 605 DRDITSYDEDSY 616
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 30.7 bits (66), Expect = 2.1
Identities = 30/132 (22%), Positives = 48/132 (36%), Gaps = 2/132 (1%)
Query: 311 RRHQTLATKNQENEPKKAKVTFAADSKPAPGDVATVVWD-KPSGSVVDASALGSAIEVFL 369
R +T A E EP + A+ +P P VA + +P+ A A +
Sbjct: 485 RTPKTPAVVEPEPEPVAEEPEPVAEPEPEPEPVAEAEPEAEPAVEEEPAEEPEPAADETA 544
Query: 370 RKSSIVDSGPSTSSVVETKEITAKTRDVPPKARDK-PGPSRAAERWYSNKPEEEEVSESC 428
+ + ++ P K + PP AR P P A R S PE + S
Sbjct: 545 TEPTAEEAEPEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRRPQSPSPERQRTSRHA 604
Query: 429 DASLCTSLKDLF 440
D + + +D +
Sbjct: 605 DRDITSYDEDSY 616
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 30.3 bits (65), Expect = 2.8
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 101 SQAPPQPGGRRHSVVTISRVPQALFGRGRRESIAAFPALGRRRDSGSKKGPPA 153
S++PP P RR S P A R +S + P RRR + K PPA
Sbjct: 338 SKSPPAPARRRRSPSASKSPPPA---PKRAKSRSKSPPARRRRSPSASKSPPA 387
>U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical
protein C14F11.4a protein.
Length = 345
Score = 29.9 bits (64), Expect = 3.7
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Query: 358 ASALGSAIEVFLRKSSIVDSGPSTSSVVETKEITAKTRDVPPKARDKPGPSRAAERWYSN 417
ASA+GS K S V S SS ++ + R PPK PS A+ + S
Sbjct: 228 ASAIGSRPGSAAEKMSSVSRSSSKSSNLKANLVMPTRRSPPPKT-----PSEAS--YAST 280
Query: 418 KPEEEEVSESCDASLCTS 435
+P+ E S AS TS
Sbjct: 281 RPKTERSSSHKSASTVTS 298
>U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical
protein C14F11.4b protein.
Length = 341
Score = 29.9 bits (64), Expect = 3.7
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Query: 358 ASALGSAIEVFLRKSSIVDSGPSTSSVVETKEITAKTRDVPPKARDKPGPSRAAERWYSN 417
ASA+GS K S V S SS ++ + R PPK PS A+ + S
Sbjct: 224 ASAIGSRPGSAAEKMSSVSRSSSKSSNLKANLVMPTRRSPPPKT-----PSEAS--YAST 276
Query: 418 KPEEEEVSESCDASLCTS 435
+P+ E S AS TS
Sbjct: 277 RPKTERSSSHKSASTVTS 294
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 29.1 bits (62), Expect = 6.5
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 303 ESGTTWFARRHQTLATKNQENEPKKAKVTFAADSKPAPGDVATVVWDKPSGSVVDASA 360
E T ++AR+ T+ KN+ N PK + + VA + + K G VV ASA
Sbjct: 25 EGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV----VAQLAYSKIEGDVVVASA 78
>Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical
protein F59A2.1b protein.
Length = 884
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 8 LIGAGEPLIVVEESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSLPTPQ 67
L+ A +P I V + V + K+T+P G+ + SPP+ + P + T S PTP
Sbjct: 145 LLNAAKPAIPVTQPLVATTAQA-KSTVPASGVIAPKTSPPEVV-IPPAKPT--FSTPTPA 200
Query: 68 CTSGPTAS 75
P +
Sbjct: 201 VVPKPATT 208
>Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical
protein F59A2.1a protein.
Length = 860
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 8 LIGAGEPLIVVEESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSLPTPQ 67
L+ A +P I V + V + K+T+P G+ + SPP+ + P + T S PTP
Sbjct: 145 LLNAAKPAIPVTQPLVATTAQA-KSTVPASGVIAPKTSPPEVV-IPPAKPT--FSTPTPA 200
Query: 68 CTSGPTAS 75
P +
Sbjct: 201 VVPKPATT 208
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 29.1 bits (62), Expect = 6.5
Identities = 40/167 (23%), Positives = 66/167 (39%), Gaps = 13/167 (7%)
Query: 262 LTSSATEIDRCGKPERPGMRRLSDNMRSSSFDASS-LREKPA--ESGTTWFARRHQTLAT 318
+T + T + R E+P R + SS ++ + E PA E + A T T
Sbjct: 2311 VTETTTTVTR-DYYEQPEDHREASPAPSSHVESERPISESPAVSEREPSHIATETTTTVT 2369
Query: 319 KNQENEPKKAKVTFAADSKPAPGDVATVVWDKPSGSVVDASALGSAIEVFLRKSSIVDSG 378
+ + EPK AD A V +V ++ D+ L + + +S
Sbjct: 2370 REYDQEPK-------ADQSSARESVRDLVSEEHEHPACDSERLSEPAQSPEPVETHAES- 2421
Query: 379 PSTSSVVETKEITAKTRDVPPKARDKPGPSRAAERWYSNKPEEEEVS 425
S++VET TA TR+ + +++ SRA + P E S
Sbjct: 2422 -QFSNLVETTTTTAVTREFYDEDQEEQASSRATKERIEQSPVASERS 2467
Score = 28.7 bits (61), Expect = 8.6
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 350 KPSGSVVDASALGSAIEVFLRKSSIVDSGPSTS----SVVETKEITAKTRDVPPKARDKP 405
+P+ S ++ S + + E +R SS V S + SV+ETK T TR+ +D+
Sbjct: 3060 EPAQSPMEVSPITTE-ENIVRPSSSVKSEYGSEGHVPSVIETKTTTTVTREFYDDDQDEH 3118
Query: 406 GPSRAAERWYSNKPEEEEVSE 426
+E S+ P EEE E
Sbjct: 3119 ENQTQSEELRSSIPTEEEEHE 3139
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 29.1 bits (62), Expect = 6.5
Identities = 40/167 (23%), Positives = 66/167 (39%), Gaps = 13/167 (7%)
Query: 262 LTSSATEIDRCGKPERPGMRRLSDNMRSSSFDASS-LREKPA--ESGTTWFARRHQTLAT 318
+T + T + R E+P R + SS ++ + E PA E + A T T
Sbjct: 2311 VTETTTTVTR-DYYEQPEDHREASPAPSSHVESERPISESPAVSEREPSHIATETTTTVT 2369
Query: 319 KNQENEPKKAKVTFAADSKPAPGDVATVVWDKPSGSVVDASALGSAIEVFLRKSSIVDSG 378
+ + EPK AD A V +V ++ D+ L + + +S
Sbjct: 2370 REYDQEPK-------ADQSSARESVRDLVSEEHEHPACDSERLSEPAQSPEPVETHAES- 2421
Query: 379 PSTSSVVETKEITAKTRDVPPKARDKPGPSRAAERWYSNKPEEEEVS 425
S++VET TA TR+ + +++ SRA + P E S
Sbjct: 2422 -QFSNLVETTTTTAVTREFYDEDQEEQASSRATKERIEQSPVASERS 2467
Score = 28.7 bits (61), Expect = 8.6
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 350 KPSGSVVDASALGSAIEVFLRKSSIVDSGPSTS----SVVETKEITAKTRDVPPKARDKP 405
+P+ S ++ S + + E +R SS V S + SV+ETK T TR+ +D+
Sbjct: 3060 EPAQSPMEVSPITTE-ENIVRPSSSVKSEYGSEGHVPSVIETKTTTTVTREFYDDDQDEH 3118
Query: 406 GPSRAAERWYSNKPEEEEVSE 426
+E S+ P EEE E
Sbjct: 3119 ENQTQSEELRSSIPTEEEEHE 3139
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 9 IGAGEPLIVVEESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSLPTPQ 67
I A E L V E ++ P A P+R S+ PP P +P R +PTPQ
Sbjct: 371 IKALEGLEVKALEAQEASDDRPSAPTPIRDSSLPPPPPPKPE--TPLAIRRAGPIPTPQ 427
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 9 IGAGEPLIVVEESGVEDAESSPKATIPLRGISIDQESPPDPYHLSPWRETRKHSLPTPQ 67
I A E L V E ++ P A P+R S+ PP P +P R +PTPQ
Sbjct: 371 IKALEGLEVKALEAQEASDDRPSAPTPIRDSSLPPPPPPKPE--TPLAIRRAGPIPTPQ 427
>AC006792-1|AAF60741.2| 642|Caenorhabditis elegans Hypothetical
protein Y50C1A.1 protein.
Length = 642
Score = 28.7 bits (61), Expect = 8.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 14 PLIVVEESGVEDAESSPKATIPLRGISIDQESPPDPYHLSP 54
P++VV ++ + +A+ + + GI + E PP H SP
Sbjct: 245 PVVVVSDTILRNAKGEELSPVAFGGIYLPLECPPSQCHRSP 285
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.313 0.128 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,600,526
Number of Sequences: 27539
Number of extensions: 438869
Number of successful extensions: 1000
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 979
Number of HSP's gapped (non-prelim): 42
length of query: 441
length of database: 12,573,161
effective HSP length: 84
effective length of query: 357
effective length of database: 10,259,885
effective search space: 3662778945
effective search space used: 3662778945
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 61 (28.7 bits)
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