GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002476-TA|BGIBMGA002476-PA|undefined
         (441 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   5.1  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   5.1  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   5.1  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   5.1  

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 285 DNMRSSSFDASSLREKPAESGTTW 308
           D M +++FD  SL  + ++ G+ W
Sbjct: 3   DQMMAATFDFPSLSFEDSDEGSNW 26


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 285 DNMRSSSFDASSLREKPAESGTTW 308
           D M +++FD  SL  + ++ G+ W
Sbjct: 47  DQMMAATFDFPSLSFEDSDEGSNW 70


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 285 DNMRSSSFDASSLREKPAESGTTW 308
           D M +++FD  SL  + ++ G+ W
Sbjct: 47  DQMMAATFDFPSLSFEDSDEGSNW 70


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 285 DNMRSSSFDASSLREKPAESGTTW 308
           D M +++FD  SL  + ++ G+ W
Sbjct: 47  DQMMAATFDFPSLSFEDSDEGSNW 70


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.313    0.128    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,848
Number of Sequences: 429
Number of extensions: 5249
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 4
length of query: 441
length of database: 140,377
effective HSP length: 60
effective length of query: 381
effective length of database: 114,637
effective search space: 43676697
effective search space used: 43676697
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 45 (22.2 bits)