BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002475-TA|BGIBMGA002475-PA|IPR000884|Thrombospondin,
type I
(300 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 25 0.62
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 25 0.62
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 25 0.62
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 25 0.62
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 25 0.62
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 25 0.62
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 24 1.9
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 24 1.9
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 24 1.9
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 24 1.9
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 24 1.9
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 24 1.9
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 2.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 2.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 2.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 2.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 2.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 2.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 2.5
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 3.3
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 3.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 4.4
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 7.6
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 7.6
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.62
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNYLKY 230
RER RD+ E SK K ISSL +NY KY
Sbjct: 64 RERSRDRKERERSKEPK--IISSLSNNY-KY 91
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.62
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNYLKY 230
RER RD+ E SK K ISSL +NY KY
Sbjct: 64 RERSRDRKERERSKEPK--IISSLSNNY-KY 91
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.62
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNYLKY 230
RER RD+ E SK K ISSL +NY KY
Sbjct: 64 RERSRDRKERERSKEPK--IISSLSNNY-KY 91
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.62
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNYLKY 230
RER RD+ E SK K ISSL +NY KY
Sbjct: 64 RERSRDRKERERSKEPK--IISSLSNNY-KY 91
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 25.4 bits (53), Expect = 0.62
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNYL 228
+ER RDK E SK K ISSL +NY+
Sbjct: 64 KERSRDKRERERSKERKI--ISSLSNNYI 90
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 25.4 bits (53), Expect = 0.62
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNYL 228
+ER RDK E SK K ISSL +NY+
Sbjct: 64 KERSRDKRERERSKERKI--ISSLSNNYI 90
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.9
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNY 227
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRTERERSKEPK--IISSLSNNY 89
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.9
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNY 227
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRTERERSKEPK--IISSLSNNY 89
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.9
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNY 227
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRTERERSKEPK--IISSLSNNY 89
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.9
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNY 227
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRTERERSKEPK--IISSLSNNY 89
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.9
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNY 227
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRTERERSKEPK--IISSLSNNY 89
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.9
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNY 227
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRTERERSKEPK--IISSLSNNY 89
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 2.5
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNY 227
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IISSLSNNY 89
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.5
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNY 227
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IISSLSNNY 89
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.5
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNY 227
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IISSLSNNY 89
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.5
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNY 227
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IISSLSNNY 89
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.5
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNY 227
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IISSLSNNY 89
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.5
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNY 227
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IISSLSNNY 89
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.5
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNY 227
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IISSLSNNY 89
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNY 227
+ER RD+ E SK K +SSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IVSSLSNNY 89
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 60 VATCWAGSSCAATRDIRSDLCHRQQSRLIPYLHANESNHCEISCVDYAGG 109
+A CW+ S AA+ + S H+Q+ + S+ +S D G
Sbjct: 212 IARCWSLDSTAASDEDISLTTHQQKRHKLRVTRCYSSDSAVLSDEDQTKG 261
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 4.4
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 140 GQCNSSDTTCNWCPDGYCNNNTNTYT 165
G N S T+ N + Y N N N YT
Sbjct: 99 GLSNRSSTSSNDPKNQYKNQNNNHYT 124
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 4.4
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 200 RERKRDKPILELSKHSKKFDISSLQDNY 227
+ER RD+ E S+ K ISSL +NY
Sbjct: 64 KERSRDRTERERSREPK--IISSLSNNY 89
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 7.6
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 208 ILELSKHSKKFDISSLQDNYLKYDP 232
I +S+ S D L DN++ Y P
Sbjct: 311 IKNVSRDSNSSDFKKLVDNWMTYMP 335
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 7.6
Identities = 12/36 (33%), Positives = 15/36 (41%)
Query: 136 TCVKGQCNSSDTTCNWCPDGYCNNNTNTYTRLLGNG 171
TC + NS+ T N + NNN N NG
Sbjct: 218 TCQRNSNNSTITAGNANTNASNNNNNNNNNNNNNNG 253
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.319 0.133 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,268
Number of Sequences: 429
Number of extensions: 4311
Number of successful extensions: 37
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 20
Number of HSP's gapped (non-prelim): 25
length of query: 300
length of database: 140,377
effective HSP length: 57
effective length of query: 243
effective length of database: 115,924
effective search space: 28169532
effective search space used: 28169532
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 44 (21.8 bits)
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