GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002473-TA|BGIBMGA002473-PA|undefined
         (276 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    25   2.4  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   5.5  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 2/89 (2%)

Query: 82  IASSINVIVIQMTMMLKLKNLVQHKDIYRRLATSMESPYFDIRTEKRRQIFEHWVKTHER 141
           I S   VI + + ++L +  L+      R     ++      RTE+RR++F+    T ++
Sbjct: 659 IVSPAAVIPLLVLLILIIYYLISLTGSLREANQDLKLQLRKERTEERRKMFKIASSTQQQ 718

Query: 142 TLKFLLFLGNGSLAAWYIHPLIDEFEYNL 170
           T    +   NG  ++W  H ++D  +  L
Sbjct: 719 TPGTGMAGINGLSSSW--HKVLDSTQLRL 745


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 109 YRRLATSMESPYFDIRTEKRRQIFEHW 135
           +RRL  +  +   DIR E+R+  F+ W
Sbjct: 857 HRRLLAAPGASRKDIRLEERQGTFQEW 883


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.328    0.140    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 275,738
Number of Sequences: 2123
Number of extensions: 11268
Number of successful extensions: 28
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 3
length of query: 276
length of database: 516,269
effective HSP length: 63
effective length of query: 213
effective length of database: 382,520
effective search space: 81476760
effective search space used: 81476760
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 47 (23.0 bits)