GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002473-TA|BGIBMGA002473-PA|undefined
         (276 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL365181-2|CAM15718.1|  582|Homo sapiens novel protein protein.        30   7.7  

>AL365181-2|CAM15718.1|  582|Homo sapiens novel protein protein.
          Length = 582

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 8/74 (10%)

Query: 135 WVKTHERTLKFLLFLGNGSLAAWYIHPLIDEFEYNLMVGLRLPFSFDTPLRYLFTYVIVL 194
           W++  E +++ L   G+G+L A   H  ++ F+   ++  + P + DTP       V+  
Sbjct: 29  WLR-QEASIQALTRAGHGALQAGQNHEALNNFQRAFLLASKAPQTRDTP-------VLQA 80

Query: 195 IAFNYTAHYVMVTD 208
            AFN  A YV   D
Sbjct: 81  CAFNLGAAYVETGD 94


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.328    0.140    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,535,633
Number of Sequences: 224733
Number of extensions: 1420904
Number of successful extensions: 2918
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2918
Number of HSP's gapped (non-prelim): 1
length of query: 276
length of database: 73,234,838
effective HSP length: 89
effective length of query: 187
effective length of database: 53,233,601
effective search space: 9954683387
effective search space used: 9954683387
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 65 (30.3 bits)