GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002473-TA|BGIBMGA002473-PA|undefined
         (276 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3249|AAF56077.1|  383|Drosophila melanogaster CG6679-PA...    35   0.11 
AE013599-1473|AAF58519.3|  396|Drosophila melanogaster CG13158-P...    30   4.0  

>AE014297-3249|AAF56077.1|  383|Drosophila melanogaster CG6679-PA
           protein.
          Length = 383

 Score = 35.1 bits (77), Expect = 0.11
 Identities = 25/146 (17%), Positives = 61/146 (41%), Gaps = 2/146 (1%)

Query: 52  VYSAVVKMMIGMFIGGELWFVCTESLSLDEIASSINVIVIQMTMMLKLKNLVQHKDIYRR 111
           +Y  V+ + +       +W+    S   +E    + + + ++ ++ KL N+   +     
Sbjct: 40  IYPFVLHLPLTFTYIALMWYEAITSSDFEEAGQVLYMSITELALVTKLLNIWYRRHEAAS 99

Query: 112 LATSME-SPYFDIRTEKRRQIFEHWVKTHERTLKFLLFLGNGSLAAWYIHPLIDEFEYNL 170
           L   ++  P F++R  +  + ++   +  +R   + ++         YI     E +Y L
Sbjct: 100 LIHELQHDPAFNLRNSEEIKFWQQNQRNFKRIFYWYIWGSLFVAVMGYISVFFQE-DYEL 158

Query: 171 MVGLRLPFSFDTPLRYLFTYVIVLIA 196
             G  +PF + T  RY + +   ++A
Sbjct: 159 PFGYYVPFEWRTRERYFYAWGYNVVA 184


>AE013599-1473|AAF58519.3|  396|Drosophila melanogaster CG13158-PA
           protein.
          Length = 396

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 18/68 (26%), Positives = 28/68 (41%)

Query: 165 EFEYNLMVGLRLPFSFDTPLRYLFTYVIVLIAFNYTAHYVMVTDLIMQSYLIPLICQYAV 224
           +F Y  +   RL F  + PL Y+  YVI      +  +  + TDL M      +      
Sbjct: 166 DFTYKRIFPTRLTFDSEKPLGYVLAYVIDFTYSQFIVNVSLGTDLWMMCVSSQISMHLGY 225

Query: 225 LADCFENI 232
           LA+   +I
Sbjct: 226 LANMLASI 233


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.328    0.140    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,339,612
Number of Sequences: 52641
Number of extensions: 479062
Number of successful extensions: 1351
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1349
Number of HSP's gapped (non-prelim): 3
length of query: 276
length of database: 24,830,863
effective HSP length: 84
effective length of query: 192
effective length of database: 20,409,019
effective search space: 3918531648
effective search space used: 3918531648
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 61 (28.7 bits)