GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002473-TA|BGIBMGA002473-PA|undefined
         (276 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.9  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              21   9.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   9.1  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   9.1  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 123 IRTEKRRQIFE-HWVKTHERTLKFLLFLGNGSLAAWYIHPLIDEFEYNLMVGLR 175
           + T ++R I    W K+     + L F   G++ A + H    +F Y +++  R
Sbjct: 439 LTTNQQRNILNTFWTKSDVDLSRGLDFTPRGAVLARFTHLNHADFSYTIVINNR 492


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 6/18 (33%), Positives = 13/18 (72%)

Query: 72 VCTESLSLDEIASSINVI 89
          VC  +++LDE+ S ++ +
Sbjct: 12 VCVSAMTLDELKSGLHTV 29


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 59  MMIGMFIGGELWFVCTESLSLDEIASSI-NVIVIQMTMMLKLKNLVQHKDI 108
           M++   +GGELW V  +    D+  +      V++    L  +N++ ++D+
Sbjct: 443 MLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNII-YRDL 492


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/12 (58%), Positives = 9/12 (75%)

Query: 230 ENILIDCSNDYG 241
           E ++IDCSN  G
Sbjct: 321 EGVIIDCSNHIG 332


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.328    0.140    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,272
Number of Sequences: 429
Number of extensions: 3036
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 4
length of query: 276
length of database: 140,377
effective HSP length: 57
effective length of query: 219
effective length of database: 115,924
effective search space: 25387356
effective search space used: 25387356
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 43 (21.4 bits)