GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002472-TA|BGIBMGA002472-PA|undefined
         (218 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    40   1e-05
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.20 
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   2.5  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.3  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.6  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   10.0 

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 40.3 bits (90), Expect = 1e-05
 Identities = 19/70 (27%), Positives = 32/70 (45%)

Query: 118 VHLPFEYKTPSRYPLAYITVVIAFIYVSYFVMVTDLIMQAHLLHLLCQFNVLADCFENML 177
           V  PF+YK P  + L Y  +  A I ++Y  + TD      L+ +  Q  +++D   N+ 
Sbjct: 152 VWFPFDYKQPVVFDLVYFILAFACISIAYTNVSTDAFFYTCLIQIETQCEIVSDTLRNLD 211

Query: 178 NDCVKGFEGI 187
                GF  +
Sbjct: 212 KIVTNGFRNV 221


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.20
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 134 YITVVIAFIYVSYFVMVTDLIMQAHLLHLLCQFN 167
           Y  V + F+   Y+     +I   HLL LLC ++
Sbjct: 135 YFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYH 168



 Score = 25.4 bits (53), Expect = 0.35
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 130 YPLAYITVVIAFIYVSYFVMVTDLIMQAHLLHLLCQFNVLADCF 173
           Y   Y  +++  +Y  Y+  +   I   HLL LLC +  +   F
Sbjct: 101 YYFYYAFIILLCVYYFYYAFI---IFTVHLLFLLCIYYFVVPLF 141



 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/33 (30%), Positives = 14/33 (42%)

Query: 132 LAYITVVIAFIYVSYFVMVTDLIMQAHLLHLLC 164
           L  +  +  F Y+        +I   HLL LLC
Sbjct: 252 LLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLC 284



 Score = 20.6 bits (41), Expect = 10.0
 Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 3/23 (13%)

Query: 142 IYVSYFVMVTDLIMQAHLLHLLC 164
           IY  Y V +T      HLL LLC
Sbjct: 56  IYYFYCVSIT---FNVHLLFLLC 75


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/32 (25%), Positives = 19/32 (59%)

Query: 1   MDYTKEYAENRLSSSDRTIIYLVYSISVKLMI 32
           +D+ KEYA   +    + I+Y +   ++K+++
Sbjct: 127 VDFVKEYAFEYIQLYSQFILYFLLFATLKILL 158


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/32 (25%), Positives = 19/32 (59%)

Query: 1   MDYTKEYAENRLSSSDRTIIYLVYSISVKLMI 32
           +D+ KEYA   +    + I+Y +   ++K+++
Sbjct: 127 VDFVKEYAFEYIQLYSQFILYFLLFATLKILL 158


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/32 (25%), Positives = 19/32 (59%)

Query: 1   MDYTKEYAENRLSSSDRTIIYLVYSISVKLMI 32
           +D+ KEYA   +    + I+Y +   ++K+++
Sbjct: 447 VDFVKEYAFEYIQLYSQFILYFLLFATLKILL 478


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/26 (34%), Positives = 17/26 (65%)

Query: 99   RKKFLYPLVDELDYNLIVGVHLPFEY 124
            R++F+  +VD ++ N   G+ L +EY
Sbjct: 1921 RRRFIAHVVDFIETNNFDGLDLDWEY 1946


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 8/30 (26%), Positives = 15/30 (50%)

Query: 129 RYPLAYITVVIAFIYVSYFVMVTDLIMQAH 158
           R+ + Y    I F Y     ++TD+I+  +
Sbjct: 149 RHTVEYFQNYIHFFYQLLLYLITDMILMRY 178


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 174 ENMLNDCVKGFEGIPLLRLLKNKQFTTKY 202
           +++  DC   F    L  L +++ F+TKY
Sbjct: 66  DSICEDCYMLFREPQLHNLCRSECFSTKY 94


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.326    0.140    0.412 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,201
Number of Sequences: 317
Number of extensions: 2170
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 11
length of query: 218
length of database: 114,650
effective HSP length: 54
effective length of query: 164
effective length of database: 97,532
effective search space: 15995248
effective search space used: 15995248
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 41 (20.6 bits)