Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002472-TA|BGIBMGA002472-PA|undefined
(218 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC320.08 |||membrane transporter |Schizosaccharomyces pombe|ch... 29 0.40
SPBC16A3.13 |meu7|aah4|alpha-amylase homolog Aah4|Schizosaccharo... 28 0.93
SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA reductase|Schi... 28 0.93
SPBPB2B2.17c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 27 2.1
SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|ch... 27 2.1
SPAC977.02 |||S. pombe specific 5Tm protein family|Schizosacchar... 27 2.8
SPBC1348.03 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 27 2.8
SPAC750.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 27 2.8
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 27 2.8
SPAC14C4.08 |mug5||meiotically upregulated gene Mug5|Schizosacch... 26 3.7
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 26 3.7
SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase Lac... 25 6.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 6.5
SPAC57A7.10c |sec21||coatomer gamma subunit Sec21 |Schizosacchar... 25 8.6
SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion cytoch... 25 8.6
SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 8.6
>SPCC320.08 |||membrane transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 505
Score = 29.5 bits (63), Expect = 0.40
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 112 YNLIVGVHLPFEYKTPSRYPLAYITVVIAFIYVSYFVMVT 151
++L++G+H+ F Y YP+A++ +++ FV T
Sbjct: 400 WSLVIGIHV-FGYHVYWLYPIAFVLIILGLFVYHVFVDAT 438
>SPBC16A3.13 |meu7|aah4|alpha-amylase homolog
Aah4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 774
Score = 28.3 bits (60), Expect = 0.93
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 62 IQFIAIYRYKNMIDHKDMYKRFATSMESPHFDTSTDKRKKFLYP-LVDELDY 112
+Q ++ +K + M RFATS PH D +K + +VD LDY
Sbjct: 22 VQALSAEEWKKQSVYNVMTDRFATSKVVPHCDVKAEKYCGGNWQGIVDHLDY 73
>SPCC162.09c |hmg1||3-hydroxy-3-methylglutaryl-CoA
reductase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1053
Score = 28.3 bits (60), Expect = 0.93
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 124 YKTPSRYPLAYITVVIAFIYVSYFVMVTDLIMQAH--LLHLLCQFNVLADCFEN 175
YK +RYP+ I +V + ++YF + L + L+ L +F +L D F N
Sbjct: 3 YKLAARYPIQVIAIVGILVSMAYFSFLEALTQEDFPVLIRALKRFGIL-DGFPN 55
>SPBPB2B2.17c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 17 RTIIYLVYSISVKLMILLLVCGEVWYSISETSSL 50
R + + Y ++VKL+I LL C WY SE S+
Sbjct: 35 RLSLTVKYCLAVKLLIYLLYC---WYIYSEVPSV 65
>SPAC17G6.05c |||Rhophilin-2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 775
Score = 27.1 bits (57), Expect = 2.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 70 YKNMIDHKDMYKRFATSMESPHFDTSTDKRKKFLYPLVDELDY 112
Y N +D +D K F T E+ T K LY +LDY
Sbjct: 33 YGNSVDVEDQIKAFNTLRENAADVDDTVAGKDILYSYYGQLDY 75
>SPAC977.02 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 146
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 17 RTIIYLVYSISVKLMILLLVCGEVWYSISETSS 49
R + + Y ++VKL+I LL C WY SE S
Sbjct: 35 RLSLTVKYCLAVKLLIYLLYC---WYIYSEVPS 64
>SPBC1348.03 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 17 RTIIYLVYSISVKLMILLLVCGEVWYSISETSS 49
R + + Y ++VKL+I LL C WY SE S
Sbjct: 35 RLSLTVKYCLAVKLLIYLLYC---WYIYSEVPS 64
>SPAC750.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 146
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 17 RTIIYLVYSISVKLMILLLVCGEVWYSISETSS 49
R + + Y ++VKL+I LL C WY SE S
Sbjct: 35 RLSLTVKYCLAVKLLIYLLYC---WYIYSEVPS 64
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 26.6 bits (56), Expect = 2.8
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 55 AGINATLIQFIAIYRYKNMIDHKDMYKRFATSMESPHFDTSTDKRKKFLYPLVDEL 110
AG+ ++ I K + +Y SME P F + +D+++ + P +D L
Sbjct: 799 AGVTVRMVTGDNIVTAKAIASQCGIYTEDGISMEGPEFRSLSDEKRLEILPKLDVL 854
>SPAC14C4.08 |mug5||meiotically upregulated gene
Mug5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 179
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 97 DKRKKFLYPLVDELDYNLIVGVHLPFEYKTPSRYPLAYITVVI 139
+ R K L L++E D NL + + ++K P Y ++ + I
Sbjct: 14 ENRIKILEDLMNEFDSNLYIRLKRECDFKLPKEYDVSIHALTI 56
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 7 YAENRLSSSDRTIIYLVYSISVKLMILLLVCGEVWYSISETSSLD 51
Y EN ++S +R I ++ S S + LL C + + TSS D
Sbjct: 533 YPENLIASIERLIPFIFSSYSNSQSVPLLPCPTQRHLLFNTSSTD 577
>SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase
Lac1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/50 (22%), Positives = 20/50 (40%)
Query: 121 PFEYKTPSRYPLAYITVVIAFIYVSYFVMVTDLIMQAHLLHLLCQFNVLA 170
P P++Y + + Y +F + IMQ + + FN+ A
Sbjct: 90 PIPGTNPAQYGKGRLDIAFCLFYALFFTFCREFIMQEIIARIGRHFNIRA 139
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 6.5
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 143 YVSYFVMVTDLIMQAHLLHLLCQFNVLADCFENMLNDCVKGFEGIPLLRLLKNKQFTT 200
Y FV+ + I Q H L + + A+ +N+L D G +PL+ L N F +
Sbjct: 69 YGEVFVLENERISQLHRLFVSWTVSERAEHLKNLLFDA--GLSNLPLVELGGNVFFNS 124
>SPAC57A7.10c |sec21||coatomer gamma subunit Sec21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 114 LIVGVHLPFEYKTPSRYPLAYITVVIAFIYVSYFVMVTDLIMQ 156
L G+ F++K PS YI + + +M+T IM+
Sbjct: 65 LFFGITKLFQHKDPSLRQFVYIIIKELSVVAEDVIMITSSIMK 107
>SPAC1420.04c |cox1101|cox11, SPAPB17E12.01c, cox11|fusion
cytochrome c oxidase assembly protein Cox1101,
mitochondrial ribosomal protein
Rsm22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 753
Score = 25.0 bits (52), Expect = 8.6
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 3 YTKEYAENRLSSSDRTIIYLVYSISV 28
Y+++Y+ ++ + RT IY + +IS+
Sbjct: 554 YSRQYSRDKFHYNQRTTIYYLVAISI 579
>SPCC622.13c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1098
Score = 25.0 bits (52), Expect = 8.6
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 26 ISVKLMILLLVCGEVWYSISETSSLDEIAAGINATLIQFIAIYRYKNMIDHKDMYKRFAT 85
++++L+++LL + W S SET D I ++ + I +K K Y FA
Sbjct: 109 LTMQLLLMLLNIADGWKSPSETVEQDFRVREITFETLENV-ITDFKPNFHDKRQYLLFAR 167
Query: 86 SMES 89
++ S
Sbjct: 168 ALSS 171
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.326 0.140 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 994,956
Number of Sequences: 5004
Number of extensions: 41110
Number of successful extensions: 161
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 147
Number of HSP's gapped (non-prelim): 17
length of query: 218
length of database: 2,362,478
effective HSP length: 70
effective length of query: 148
effective length of database: 2,012,198
effective search space: 297805304
effective search space used: 297805304
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 52 (25.0 bits)
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