Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002470-TA|BGIBMGA002470-PA|IPR005024|Snf7
(225 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 29 0.15
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 26 1.0
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 25 1.8
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 25 2.4
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 25 2.4
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 25 2.4
AJ618920-1|CAF01999.1| 204|Anopheles gambiae putative odorant-b... 23 5.6
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 23 7.3
AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7... 23 9.7
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 23 9.7
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 28.7 bits (61), Expect = 0.15
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Query: 42 LRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQ------QLDNLRAQSFNMEQANYA 95
++K +D + K + GP K VLK ++M Q QL +R QS + + + A
Sbjct: 168 IQKAEDLIQKDKVGPRVLESAAKFCEVLKGREMQRQFRLEQEQLQQMRKQSVDTQTLSQA 227
Query: 96 TQTLKDTHTTISAMKDGVTQMKKEFKKINI 125
LK + + K+E K+ I
Sbjct: 228 NHWLKSHGDRLLEDRQRFDNYKRELKETMI 257
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 25.8 bits (54), Expect = 1.0
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 34 KVQKLDTELRKYK-DQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQA 92
K+ + E ++ K DQ+SK +E K++A VLK+KK ++ R + ++
Sbjct: 237 KLYHNEKEAKRLKEDQISKQQELNIIEKRKEEADEVLKEKKKEVGKM--TREMAKKEQEI 294
Query: 93 NYATQTLKDTHTTISAMKDGV--TQMKKEFKKINIDSIDDVND-ELADMMEQADEVQE 147
+ H K+ V TQ K + ++ ++ AD+ + DE+QE
Sbjct: 295 REVEAEMSKRHPMFIKAKEKVAHTQKKLDGALKTLEQARRADEAHQADIKKLVDELQE 352
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 25.0 bits (52), Expect = 1.8
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 22 KNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDN 81
KNV+ + E+ +++ ++L+K + SK E A V KA QL+
Sbjct: 10 KNVED--EEHERLIEEFISKLKKSYKKASKAEENEAPRKVSHKA------------QLER 55
Query: 82 LRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDELADMMEQ 141
+ + N+E + + + +M ++++KK+ K+ + I+ + +++ E
Sbjct: 56 FKNYANNLEIEDLRDGMIAQMIEFMESMIKEMSELKKQLKQKSTQEIEVQTAQPSELAED 115
Query: 142 ADEVQE 147
A V +
Sbjct: 116 APFVPQ 121
Score = 22.6 bits (46), Expect = 9.7
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 106 ISAMKDGVTQMKKEFKKINIDSIDDVNDELADMMEQADEVQEA 148
I ++DG+ EF + I + ++ +L Q EVQ A
Sbjct: 65 IEDLRDGMIAQMIEFMESMIKEMSELKKQLKQKSTQEIEVQTA 107
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
structural protein protein.
Length = 1645
Score = 24.6 bits (51), Expect = 2.4
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 20 CIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQL 79
CI +D N + +EL+K KD+++K++E + K +R L Y +
Sbjct: 1100 CILELDTMLANHLHREAFSSSELQKAKDRLAKLQELSGGLNTIWKGVRWLMDVIGYAR-- 1157
Query: 80 DNLRAQSFNMEQ 91
D NM+Q
Sbjct: 1158 DRANMPELNMKQ 1169
Score = 23.8 bits (49), Expect = 4.2
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 14 GPSITDCIKN-VDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQK 72
G IT N VD A + + V L + ++ + Q P+ KQK + KQ
Sbjct: 354 GTIITPATTNSVDVLAVHNAKSVSPLPSYTQQQQQQQQSAAAPPSY--WKQKKLPTKKQH 411
Query: 73 KMYEQQLDNL 82
K + QLD L
Sbjct: 412 KQLQAQLDKL 421
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 24.6 bits (51), Expect = 2.4
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 19 DCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQ 78
D I+N G+ +N +++Q+ ELR+ K + + + +Q M+V +Q EQ+
Sbjct: 629 DKIRNQRGQIENSIKELQERCAELREQKRDLQEQ-----LSKYQQTKMKVKRQ----EQK 679
Query: 79 LDNLRAQSFNMEQ 91
L A+ N+++
Sbjct: 680 CKELTARLVNVDE 692
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 24.6 bits (51), Expect = 2.4
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 17/115 (14%)
Query: 22 KNVDGRADNIEQ----KVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMR--VLKQKKMY 75
KNVD + I + KV+ L T++ Q+ K+ +K +V+ K V K K
Sbjct: 878 KNVDRYTEQINEITNSKVKVLQTKINGLGKQIDKLSANISKLTVEIKTSERNVQKSKDKI 937
Query: 76 EQQLDNLRAQSFNM-----------EQANYATQTLKDTHTTISAMKDGVTQMKKE 119
D + A + E+AN + L++ I +G + +KKE
Sbjct: 938 NSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHEGSSSIKKE 992
>AJ618920-1|CAF01999.1| 204|Anopheles gambiae putative
odorant-binding protein OBPjj4 protein.
Length = 204
Score = 23.4 bits (48), Expect = 5.6
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 104 TTISAMKDGVTQMKKEFKK 122
T + KDG TQ+K + KK
Sbjct: 168 TNVWTQKDGCTQLKDKIKK 186
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 23.0 bits (47), Expect = 7.3
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 40 TELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKK---MYE-QQLDNLRAQSFN 88
TE+ +KD + K++ P S ++ +R+ K ++E ++ D +SF+
Sbjct: 277 TEVSTHKDILRKLKADPELQSFGKQVVRIRSTKNGGLLFELKKSDQTECESFS 329
>AJ459960-1|CAD31059.1| 696|Anopheles gambiae prophenoloxidase 7
protein.
Length = 696
Score = 22.6 bits (46), Expect = 9.7
Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 82 LRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDD 130
LR+ + A YA TL+D ++ +++++++ ++I I +ID+
Sbjct: 289 LRSANNRTYPARYANMTLEDVIRPNDGLRVIISEVERQLQRI-IAAIDE 336
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 22.6 bits (46), Expect = 9.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 190 PAAPDREPGADSIRNKDGVP 209
P P EPGA S + ++G P
Sbjct: 300 PEGPPGEPGAASEKGQNGEP 319
Score = 22.6 bits (46), Expect = 9.7
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 196 EPGADSIRNKDGVP 209
EPG +R DG+P
Sbjct: 318 EPGVPGLRGNDGIP 331
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.311 0.128 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,601
Number of Sequences: 2123
Number of extensions: 6387
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 13
length of query: 225
length of database: 516,269
effective HSP length: 62
effective length of query: 163
effective length of database: 384,643
effective search space: 62696809
effective search space used: 62696809
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 46 (22.6 bits)
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