GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002469-TA|BGIBMGA002469-PA|IPR008940|Protein
prenyltransferase, IPR013026|Tetratricopeptide region,
IPR011716|Tetratricopeptide TPR_3, IPR001440|Tetratricopeptide TPR_1
         (1272 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    26   7.2  
AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    25   9.6  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   9.6  

>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
            Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 1176 KELLTKILNHNNSCARAYQYLAEKEQNYKSAAHNYDNAW 1214
            +E+ T     N+S  R+Y ++AE E+N +  A   D  W
Sbjct: 277  QEIRTCHWGFNSSNWRSYIHVAESEKNREEHAQVLDKIW 315


>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 448 EIYKEYKKHLPKKPFIIIGYLLYSQEGNIPVVIQC 482
           + Y EY    PKK  I+  YLLY     I   + C
Sbjct: 10  KFYDEYTHKTPKKLKIVDAYLLYILLTGIMQFVYC 44


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 25.4 bits (53), Expect = 9.6
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 1085 LQLATKNKGQAERVLQDLLPLVTEDGYQD 1113
            L L T+NK  AE++L  +  L   +GY D
Sbjct: 649  LPLRTQNKTDAEKILSHVHALKQAEGYID 677


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.133    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,165,094
Number of Sequences: 2123
Number of extensions: 44447
Number of successful extensions: 147
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 144
Number of HSP's gapped (non-prelim): 3
length of query: 1272
length of database: 516,269
effective HSP length: 72
effective length of query: 1200
effective length of database: 363,413
effective search space: 436095600
effective search space used: 436095600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)