GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002468-TA|BGIBMGA002468-PA|undefined
         (72 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    22   2.4  
AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive ...    21   3.2  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    20   7.4  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    20   9.8  

>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
          protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 17 KVVNNVAKQQFAVSIKGEDAVISYEKKGKGITLIHTNVPQAF 58
          KVV   A +Q    I G D V S     +G+   + N  ++F
Sbjct: 30 KVVIPEAMKQLYAQIMGHDLVDSVSVPKEGLNTRNANTVRSF 71


>AF203335-1|AAF19830.1|  175|Anopheles gambiae immune-responsive
          serine protease-relatedprotein ISPR20 protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query: 25 QQFAVSIKGEDAVISYE 41
          +QF  + KGED +  Y+
Sbjct: 5  EQFCTTSKGEDGICVYQ 21


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 3   GMLTRARAFSTEALKVVNNVAKQQFAVSIKGEDAVISYEKKGKG 46
           G +TR  A   + ++ V     ++  + IK ++ V   +KK  G
Sbjct: 281 GKMTREMAKKEQEIREVEAEMSKRHPMFIKAKEKVAHTQKKLDG 324


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein
          protein.
          Length = 1036

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 35 DAVISYEKKGKGITLIHTNV 54
          D VISY K GK    I  ++
Sbjct: 65 DNVISYIKNGKDSATIRISI 84


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.132    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,325
Number of Sequences: 2123
Number of extensions: 1278
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 72
length of database: 516,269
effective HSP length: 50
effective length of query: 22
effective length of database: 410,119
effective search space:  9022618
effective search space used:  9022618
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)