Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002467-TA|BGIBMGA002467-PA|undefined
(246 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0257 + 16924402-16924610,16924839-16924851 33 0.28
08_02_0292 - 15420378-15421229 32 0.37
05_04_0369 - 20691100-20691235,20691318-20691488,20691540-206919... 32 0.49
02_01_0570 - 4195409-4195443,4196245-4196333,4196539-4196630,419... 31 1.1
07_03_1028 - 23378140-23378802 30 1.5
04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903 30 1.5
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 30 1.5
01_01_1190 + 9463973-9465732,9466210-9466440,9467664-9467793,946... 30 1.5
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433... 30 2.0
06_01_1104 + 9097108-9097779 30 2.0
07_03_0605 + 19908541-19909605,19909703-19910092 29 2.6
01_01_0709 - 5489623-5490360 29 2.6
12_02_0858 + 23740589-23743233,23743362-23743503,23744778-237449... 29 3.5
11_06_0652 - 25906001-25906237,25906345-25906830 29 3.5
11_04_0301 + 16142236-16142945,16143748-16144247,16144557-161446... 29 3.5
09_06_0123 - 20997498-20997512,20998015-20998100,20999066-209991... 29 3.5
07_03_1066 + 23718932-23719204 29 3.5
06_03_0079 - 16301056-16301611,16301745-16301906,16306776-163071... 29 4.6
04_04_0302 - 24255456-24255935,24256723-24257604 29 4.6
01_06_1731 + 39516897-39517632,39517744-39517912,39517985-395184... 29 4.6
09_06_0364 + 22554082-22554225,22554306-22554520,22554671-225547... 28 6.1
07_03_0918 - 22581625-22581687,22581773-22581868,22581980-225822... 28 6.1
05_06_0097 + 25548272-25548664 28 6.1
04_04_1618 + 34822644-34822915,34823008-34823369,34824721-348247... 28 6.1
02_03_0265 + 17066253-17066501,17067102-17068121 28 6.1
02_01_0099 + 726576-727105,727899-728048,728510-728635,728726-72... 28 6.1
12_01_0298 - 2250517-2251235,2251331-2251577,2251615-2252951,225... 28 8.1
06_02_0208 - 13026296-13026654,13027394-13027497,13028109-130282... 28 8.1
05_05_0352 + 24328117-24328303,24328451-24328559,24330634-243306... 28 8.1
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 28 8.1
01_07_0212 + 42018162-42018266,42018371-42018489,42019392-42019905 28 8.1
01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718 28 8.1
01_06_1743 + 39601644-39602023,39602301-39602734,39602828-396030... 28 8.1
>02_03_0257 + 16924402-16924610,16924839-16924851
Length = 73
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 37 FRRRPASTSRADDNARRKQKQHDKNGNGGSTEDLRG 72
F+RRP SR +DN R+++K+ D+ G GG ++ G
Sbjct: 31 FQRRPFVYSRRNDN-RQEKKRGDEGGGGGGEGEVEG 65
>08_02_0292 - 15420378-15421229
Length = 283
Score = 32.3 bits (70), Expect = 0.37
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Query: 10 KGAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDKNGNGGS--- 66
+G+++R R A + RRRP + + AD+ A + ++ ++G GG
Sbjct: 151 RGSRRRRDGRPWRRRGGAEREAAGADDERRRPVAETVADEAAAGRGRRGGRSGAGGGSRR 210
Query: 67 --TEDLRGDDVLSGRSTPLARPRKETAG 92
TE RG + +A PR+ AG
Sbjct: 211 RRTERRRGREQAEEGRAAVAAPRRSRAG 238
>05_04_0369 -
20691100-20691235,20691318-20691488,20691540-20691940,
20692084-20692452,20692540-20692986,20693065-20693772
Length = 743
Score = 31.9 bits (69), Expect = 0.49
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 39 RRPASTSRADDNARRKQKQHDKNGNGGSTEDLRGDDVLSGRSTPLARPRKETAGQPLRTN 98
+RPAS A R + +D G GG + +L+ R L + ++ET G+ ++
Sbjct: 488 KRPASAPSAPPAQDRHAQSYDGRGRGGEVQ----ASLLAPRKLDLGKGQEETKGKEVKKK 543
Query: 99 RFGFRQSHAKTAKVGDLTLAA 119
++ VGD LAA
Sbjct: 544 YVAPQEFQLGMPLVGDDVLAA 564
>02_01_0570 -
4195409-4195443,4196245-4196333,4196539-4196630,
4196726-4196833,4196984-4197118,4197211-4197256,
4197358-4197458,4198285-4198422,4198503-4198601,
4198740-4198856,4199195-4199356,4199734-4199793,
4200371-4200538,4200608-4200718,4201401-4201499,
4201579-4201644,4202407-4202490,4202563-4202605,
4202684-4202739,4202817-4202925,4203442-4203524,
4203842-4203925,4204311-4204382,4204462-4204539,
4204633-4204716,4204806-4204876,4205943-4206012,
4206495-4206626,4207168-4207284,4208185-4208367
Length = 963
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 52 RRKQKQHDKNGNGGSTEDLRGDDVLSGRSTPLARPRKETAGQPLR 96
R +++ D +GNG D+ G DVL + P P K + + LR
Sbjct: 14 RYHRRRDDDDGNGNDCSDVLGVDVLDEGADPFDIPAKRASVERLR 58
>07_03_1028 - 23378140-23378802
Length = 220
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/85 (24%), Positives = 35/85 (41%)
Query: 2 RQSGHSESKGAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDKN 61
R S + + A ++ N ++ T A+S R + S +R A R++ + K+
Sbjct: 78 RASKKKKQQAAAEQAARMPNNRTTRPTTRRASSSRSRTKEESHARGGGAAPRRENKDRKD 137
Query: 62 GNGGSTEDLRGDDVLSGRSTPLARP 86
G GG R + R P A P
Sbjct: 138 GAGGRRSQRRAPTISGPRVPPPATP 162
>04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903
Length = 405
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 4 SGHSESKGAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDK-NG 62
SG S+ G+ +R G + RG RRRPA+ A A + K NG
Sbjct: 296 SGRSDGAGSSRRAWLGFKAGRPAMARGGGV-HDHRRRPAAADGAKAAAHSRSSGAAKSNG 354
Query: 63 NGGSTEDLRGDDVLSG 78
G ++ +G+ L+G
Sbjct: 355 ARGKGKERKGEGFLTG 370
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 6/81 (7%)
Query: 148 QLPLVATQVSSGGVTNIVGAAGLPKA---VTKQTVILTYQSQQYAPQAGQTKADATGVRA 204
+LP++ T GV + GA +P + I Y P QT A +
Sbjct: 85 RLPILPTPGMPLGVPQVPGAPLMPGVRPPILPAPGIPGYPGAPNVPTMPQTGAPPGSM-- 142
Query: 205 TPPKTQPPGKYTFQTNQLPRP 225
PP + PPG Q LPRP
Sbjct: 143 -PPGSMPPGSMPMQMAPLPRP 162
>01_01_1190 +
9463973-9465732,9466210-9466440,9467664-9467793,
9468723-9468888,9469528-9469859,9470284-9470513,
9471535-9471613,9471689-9471865
Length = 1034
Score = 30.3 bits (65), Expect = 1.5
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 10/145 (6%)
Query: 6 HSESKG-AKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQK-QHDKNGN 63
+SE +G K ++ G+S + VA FG + AS A+ NA + Q +++G
Sbjct: 265 NSEERGFTTKITETEIKKGDSVEKKIVA--FGSDQLDASV--AEGNACTESSFQGERHGC 320
Query: 64 GGSTEDLRGDDVLSGRST--PLARPRKETAGQPLRTNRFGFRQSHA-KTAKVGDLTLAAE 120
G S D RG + S P +++ + T R+S +T+++GDL L E
Sbjct: 321 GSSMRDHRGVSTRAKASNALPFGLVVQDSGAKVSSTKLSDERRSAGVRTSELGDLGLVDE 380
Query: 121 QAFEAPNDKDTALNNNALDKKITSN 145
Q+F +D D A K ++ N
Sbjct: 381 QSFTV-HDNDAASREYGGVKGVSMN 404
>07_03_0792 -
21541301-21542143,21542426-21542661,21543177-21543373,
21543459-21544173,21544250-21544892,21545970-21546139,
21546442-21546943
Length = 1101
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 63 NGGSTEDLRGDD-VLSGRSTPLARPRKETAGQPLRTNRFGFRQSHAKTAKVGDLTLAAEQ 121
+G S+ DLR D +L+ + L+ K + G P+ N+ G ++ + GD+ L +++
Sbjct: 416 HGTSSSDLRDDKPLLTLNPSNLSAASKSSQGNPIDVNKLGVVSLKSEAGQNGDVKLISKE 475
>06_01_1104 + 9097108-9097779
Length = 223
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 10 KGAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDKNGNG-GS-- 66
+G+++R R A + RRRP + + AD+ A + ++ ++G G GS
Sbjct: 91 RGSRRRRDGRPWRRRGGAEREAAGADDERRRPVAETVADEAAAGRGRRGGRSGAGEGSRR 150
Query: 67 --TEDLRGDDVLSGRSTPLARPRKETAG 92
TE RG + +A PR+ AG
Sbjct: 151 RRTERCRGREQEEEGRAAVAAPRRSRAG 178
>07_03_0605 + 19908541-19909605,19909703-19910092
Length = 484
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 42 ASTSRADDNARRKQKQHDKNGNGGSTEDLRGDDVLSGRST 81
++ SR D R+K + +G GG +D GDD R T
Sbjct: 319 SARSREDGKERKKPTLTNNDGGGGDDDDDEGDDFSEKRLT 358
>01_01_0709 - 5489623-5490360
Length = 245
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 4 SGHSESKGAKKRDKSASGNG-NSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDKNG 62
+G E++ A++R +A+G G + T R R +RR+++ + G
Sbjct: 13 TGQRETRHARRRGLTAAGGGVGDDVGDDAETGGRLGRLRGGQQRLVPRSRRRREVGARAG 72
Query: 63 NGGSTEDLRGDDVLSGR 79
+G T RGD + G+
Sbjct: 73 DGAETAAGRGDVAVGGQ 89
>12_02_0858 +
23740589-23743233,23743362-23743503,23744778-23744990,
23745083-23745190,23745378-23745587,23745881-23746055,
23746197-23746264
Length = 1186
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 50 NARRKQKQHDKNGNGGSTEDLRGDDV--LSGRSTPLARPRKE 89
N + QKQ +GN S +L D + LSG+ +PLA+ K+
Sbjct: 90 NQLKLQKQTSADGNTESWSELNRDAIGGLSGKGSPLAKSGKQ 131
>11_06_0652 - 25906001-25906237,25906345-25906830
Length = 240
Score = 29.1 bits (62), Expect = 3.5
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 17 KSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDKNGNGGSTEDLRGDDVL 76
++A+G+ K +A + G R +P + RA+++++R+ KNGN + G
Sbjct: 130 QAANGSRIEKKLDKLAVAAGSRDQP-NQRRANNSSQREIFNTGKNGNNNGGWNKGGGQQQ 188
Query: 77 SGRSTPLARPRKETAGQP 94
+G R K+ AG P
Sbjct: 189 NGGKGGKRRRGKKAAGPP 206
>11_04_0301 +
16142236-16142945,16143748-16144247,16144557-16144649,
16144879-16145005,16145265-16145468,16145587-16145692
Length = 579
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/66 (25%), Positives = 30/66 (45%)
Query: 10 KGAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDKNGNGGSTED 69
+G + S S GNSK TR +T F R +++++ R+++Q E
Sbjct: 81 RGKRIMTPSYSSGGNSKGTRRDSTGDAFNRLADLRVQSNESKARREEQKQAKSARACMEM 140
Query: 70 LRGDDV 75
L+ D +
Sbjct: 141 LKADGI 146
>09_06_0123 -
20997498-20997512,20998015-20998100,20999066-20999198,
20999264-20999341,21000130-21000216,21001164-21001254,
21001338-21001488,21001567-21002296,21002404-21002820
Length = 595
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 11 GAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDKNGNGGS 66
G+ S+ G+GNS G A ++S A+D++RR ++ N NG S
Sbjct: 222 GSGSGSNSSYGHGNSTNGAGGANMNNIIHSSGTSSSANDSSRRISGNNNWNNNGRS 277
>07_03_1066 + 23718932-23719204
Length = 90
Score = 29.1 bits (62), Expect = 3.5
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 1 MRQSGHSESKGAKKRDK-SASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHD 59
M SG S + +K D SA G S LTR + RR + S D AR + +
Sbjct: 18 MSVSGTSAAPEEEKDDPCSAGGRRGSLLTRQKEMRYDVRRIEPTESLKDTAARGAKPRVS 77
Query: 60 KNGNGGSTEDL 70
+ N GS +L
Sbjct: 78 SSRNAGSRTEL 88
>06_03_0079 -
16301056-16301611,16301745-16301906,16306776-16307134,
16307372-16307884
Length = 529
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Query: 39 RRPASTSRADDNARRKQKQHDKNGNGGSTEDLRGDDVLSGRSTPLARPRKETAGQPLRTN 98
+RP S + D RR H G RG D GR A PR+E + RT+
Sbjct: 316 KRPLPISSSSDAKRRVLSGHGYTGGADGRGQYRGSD--GGRKDGEATPRREIRVRG-RTS 372
Query: 99 RFGFRQSHAKTAKVG 113
R+ R + + G
Sbjct: 373 RWDRRSEVSPRTQEG 387
>04_04_0302 - 24255456-24255935,24256723-24257604
Length = 453
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 23 GNSKLTRGVATSFGFRRRPASTSRADDN 50
G L+ G SFGF + P+S+ ADD+
Sbjct: 141 GFGGLSAGEGDSFGFMKNPSSSGNADDS 168
>01_06_1731 +
39516897-39517632,39517744-39517912,39517985-39518488,
39518619-39518747,39519849-39519990,39520082-39520453
Length = 683
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 7 SESKGAKKRDKSASGN-GNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDKNGNGG 65
S KG+ GN G+ + ++G ++ AS S + A KQ Q G GG
Sbjct: 352 SSGKGSSGSQSKGGGNAGHERKSKGGKSAAAACSTAASASSSTATAPSKQSQKGGGGGGG 411
Query: 66 STEDLRG 72
RG
Sbjct: 412 RGGSWRG 418
>09_06_0364 +
22554082-22554225,22554306-22554520,22554671-22554752,
22554976-22555371,22555553-22556293,22556420-22556551,
22556981-22557367
Length = 698
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 39 RRPASTSRADDNARRKQKQHDKNGNGGSTEDLRGDDV 75
+ A+ S +DD+ +++ D N GS EDL +D+
Sbjct: 528 KESAAASGSDDDEEEEEEAADVPPNSGSEEDLSEEDI 564
>07_03_0918 - 22581625-22581687,22581773-22581868,22581980-22582268,
22582341-22582477,22582567-22582683,22583277-22583440,
22583542-22583756,22583838-22584004,22584206-22584559,
22584647-22584795,22584907-22585030,22585132-22585371,
22585723-22586140,22586297-22586920,22586999-22587183,
22587302-22587412,22587583-22587789,22587869-22587967,
22588063-22588159,22588296-22588384,22588495-22588548,
22588671-22588793,22588872-22588940,22589020-22589089,
22589202-22589260,22589367-22589570,22590032-22590060,
22590375-22590433,22590513-22590634,22591637-22591830,
22591974-22592088
Length = 1680
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 28 TRGVATSF-GFRRRPASTSRADDNARRKQKQHDKNGNGGSTEDLRGDDVLSGRSTPLARP 86
T G+ +S+ R AS S D+ Q H + S ++ G SGR+ P P
Sbjct: 1353 TNGLGSSYHDSREGGASISHIDE-----QDGHQETNAQTSLDNSEGLPSPSGRAQPAVSP 1407
Query: 87 RKETAGQPLRTN 98
R +T GQ + N
Sbjct: 1408 RGQTFGQRIMGN 1419
>05_06_0097 + 25548272-25548664
Length = 130
Score = 28.3 bits (60), Expect = 6.1
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Query: 46 RADDNARRKQKQHDKNGNGGSTEDLRGDDVLSGRSTPLARPRKETAGQPLRTNRFGFRQS 105
R DD+ARR++ Q ++G +D RG G TP A G P+ R S
Sbjct: 19 RRDDDARRRRHQEQQHGGVDDADDSRG-----GTGTPSA-----PVGIPVTRAPTTRRIS 68
Query: 106 HAKTA 110
H TA
Sbjct: 69 HGSTA 73
>04_04_1618 +
34822644-34822915,34823008-34823369,34824721-34824796,
34824887-34824980,34825086-34825223
Length = 313
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 40 RPASTSRADDNARRKQKQHDKNGNG 64
R + R D ARR+ K+HDK+G+G
Sbjct: 131 RRQAADRLDAVARRELKRHDKDGDG 155
>02_03_0265 + 17066253-17066501,17067102-17068121
Length = 422
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 7 SESKGAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTS------RADDNARRKQKQHDK 60
++S GAK+ + +SK AT+ + +S+S + + RRK+++
Sbjct: 251 AKSSGAKRNSPGGAAASSSKAAAATATAPSSSKASSSSSVSVTVPTSSISQRRKRRKKST 310
Query: 61 NGNGG 65
NG+GG
Sbjct: 311 NGSGG 315
>02_01_0099 +
726576-727105,727899-728048,728510-728635,728726-729714,
729776-729818,730101-730218,730743-730853
Length = 688
Score = 28.3 bits (60), Expect = 6.1
Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 13/124 (10%)
Query: 38 RRRPASTSRADDNARRKQKQHDKNGNGGSTEDLRGD-DVLSGRSTPLARPRKE------- 89
R PA + + RK+K G D RG+ +V SG S+P R +E
Sbjct: 50 RSIPARLLKMPHHGGRKKKNKGGKGKPRKKTDDRGEANVGSGDSSPAVRVEEEAEVEAEA 109
Query: 90 ---TAGQPLRTNRFGFRQSHAKTAKVGDLTLAAEQAFEAPNDKD--TALNNNALDKKITS 144
TA +P R+ + A+ G A Q+ + P+ + A+ N D+ +
Sbjct: 110 EVGTAVEPQRSGTLASPTDVVEAAQHGQRQQQASQSQQTPSPRSYAAAVVNKREDETVGY 169
Query: 145 NYHQ 148
N+ Q
Sbjct: 170 NFLQ 173
>12_01_0298 -
2250517-2251235,2251331-2251577,2251615-2252951,
2256029-2256188
Length = 820
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 3 QSGHSESKGAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDKNG 62
Q G S G + D S SKL V+ G RR R +R+Q+ + +
Sbjct: 430 QPGRPGSAGMRSDDGGDSDGARSKL---VSLRGGRRRGRRRRRRRRQRQQRRQEGNRRRL 486
Query: 63 NGGSTEDLRGDDVLSGRST 81
+GG+ R ++ + GR +
Sbjct: 487 DGGAAPASREEEQMVGRGS 505
>06_02_0208 -
13026296-13026654,13027394-13027497,13028109-13028200,
13028418-13028774,13029932-13030109,13030454-13030507,
13030701-13030784,13031521-13031714
Length = 473
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 190 PQAGQTKADATGVRATPPKTQPPGKYTFQTN-QLPRPQYPAVKNIDAKATKQVK 242
P A A A +ATPP+ QP K Q+P P+ V I K ++K
Sbjct: 19 PAAPAPAAAAAEAKATPPQPQPQQKPAAPVQPQMPTPRPWPVAFIPPKPVAEIK 72
>05_05_0352 +
24328117-24328303,24328451-24328559,24330634-24330692,
24331139-24331220,24331361-24331481,24331751-24332278,
24332724-24332831,24332934-24333131,24334043-24334234,
24336116-24336199,24336385-24336525,24336683-24336748,
24336880-24337047,24337134-24337463,24337568-24337666
Length = 823
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 8 ESKGAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDKNGNGGST 67
+S+ K+ A G S +TR + +RR ++S + + D+NGN GS
Sbjct: 198 QSEALVKKRSVAKATG-STITRRTRGNMRAKRRGRTSSPDIVATDNEDEDRDENGNEGSK 256
Query: 68 EDLRGDD 74
E DD
Sbjct: 257 ESSSVDD 263
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 2 RQSGHSESKGAKKRDKSA-SGNGNSKLTRGV---ATSFGFRRRPASTSRADDNARRKQKQ 57
R S +S S + + D S S NG K G S R R R N RR ++
Sbjct: 132 RNSSNSSSSSSSRDDYSGGSYNGRGKRKYGDYRRGYSDWGRDREKERGRPGSNGRRYEEN 191
Query: 58 HDKNGNGGSTEDLRG 72
D++G G + RG
Sbjct: 192 DDEDGAPGFRRERRG 206
>01_07_0212 + 42018162-42018266,42018371-42018489,42019392-42019905
Length = 245
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 9 SKGAKKRDKSASGNGN-SKLTRGVATSFGFRRRPASTSRADDNARRKQK 56
S+ KK+D SASG+G+ SK G +R A + A+ + + Q+
Sbjct: 174 SRTPKKKDVSASGSGSVSKEVAGRRAKRALKREAADKAAAEKHLKHLQR 222
>01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718
Length = 336
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 185 SQQYAPQAGQTKADATGVRATPPKTQPPGKYTFQTNQLPRPQYPAVKNIDAKA 237
S Q A + G KA+ G A P QP + T T++ P+P + +AKA
Sbjct: 109 SDQPAEKPGPDKAE--GSAAEPNNPQPSPEPTKSTDETPKPNQEIQEPSNAKA 159
>01_06_1743 +
39601644-39602023,39602301-39602734,39602828-39603006,
39603636-39603716,39603828-39603914,39604000-39604006,
39604241-39604312,39604712-39604792,39605156-39605262
Length = 475
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Query: 15 RDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDKNGNGGSTED 69
R+ S G GNS L + + S AS S D Q +GNGG T D
Sbjct: 408 REPSTKGEGNSPLDQKHSVS-------ASGSSQDAKKPNSNNQRPVHGNGGKTSD 455
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.309 0.125 0.351
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,625,581
Number of Sequences: 37544
Number of extensions: 341247
Number of successful extensions: 1113
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1100
Number of HSP's gapped (non-prelim): 37
length of query: 246
length of database: 14,793,348
effective HSP length: 80
effective length of query: 166
effective length of database: 11,789,828
effective search space: 1957111448
effective search space used: 1957111448
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 59 (27.9 bits)
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