Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002467-TA|BGIBMGA002467-PA|undefined
(246 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12722| Best HMM Match : Oxysterol_BP (HMM E-Value=1.2) 38 0.008
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 34 0.13
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5) 33 0.22
SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41) 32 0.38
SB_11727| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_59266| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 31 0.67
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.88
SB_292| Best HMM Match : HEAT (HMM E-Value=4.6e-29) 30 2.0
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_51639| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_19213| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 29 3.6
SB_37902| Best HMM Match : RPH3A_effector (HMM E-Value=7.6e-10) 29 3.6
SB_11348| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 29 3.6
SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 29 3.6
SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 4.7
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 29 4.7
SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5) 29 4.7
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 28 6.2
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 28 8.2
SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_4588| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_58243| Best HMM Match : DUF584 (HMM E-Value=1.5) 28 8.2
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 28 8.2
SB_25011| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_3296| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_12722| Best HMM Match : Oxysterol_BP (HMM E-Value=1.2)
Length = 640
Score = 37.9 bits (84), Expect = 0.008
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 13 KKRDKSASGNGNSKLTRG--VATSFGFRRRPASTSRADDNAR--RKQKQHDKNGNG-GST 67
K+ D+ + NS+ T G GF R ST + + + + + DK G GS
Sbjct: 264 KEEDEDGAETVNSEKTNGDKCEKDSGFGRTDESTKNDESSEQDTTEDTKRDKGKTGKGSN 323
Query: 68 EDLRGDDVLSGRSTPLARPRKETAGQPLRTNRFGFRQSHAKTAKVG 113
+ RGD +++P P+KE+ +R R R+S +++VG
Sbjct: 324 GNERGDRTECKKASPPESPKKESKTSTIREGRMALRES--SSSRVG 367
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 16 DKSASGNGNSKLT-RGVATSFGFRRRPASTSRADDNARRKQKQHDKNGNGGSTEDLRG 72
+ S S G+++L R TS+G R +STSR D + R Q +D++G+ S RG
Sbjct: 72 EPSYSSAGSNRLPDRRGDTSYGTDRFASSTSRDDFGSGRGQNNYDRDGSQASPSFFRG 129
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 33.1 bits (72), Expect = 0.22
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Query: 141 KITSNYHQLPLVATQVSSGGVTNIVGAAGLPKAVTKQTVILTYQSQQYAPQA-GQTKADA 199
KIT+ H+ T VS+ AG K Q + P+ G T+
Sbjct: 230 KITTPQHETKPGETTVSTPKAPGPTQPAGTTKNTAPQPETQPEGTTASTPEVPGPTQPTQ 289
Query: 200 TGVRATPPKTQPPGKYTFQTNQLPRPQYPAVKNIDA 235
T T P +QP G+ T T + P P PA I+A
Sbjct: 290 TKKTTTKPVSQP-GETTASTPKAPGPTQPASTTIEA 324
Score = 28.7 bits (61), Expect = 4.7
Identities = 44/200 (22%), Positives = 73/200 (36%), Gaps = 15/200 (7%)
Query: 40 RPASTSRADDNARRK-QKQHDKNGNGGSTEDLR--GDDVLSGRSTPLARPR-KETAGQPL 95
+P + A NA ++ K G+ GS + G DV + + +P + K++
Sbjct: 63 KPKPKNPAASNAPKEGNKPFPATGSPGSASPPKTNGPDVGTQQPSPASPTSIKQSPNSSS 122
Query: 96 RTNRFGFRQSHAKTAKVGDLTLAAEQAFEAPNDKDTALNNNALDKKI------TSNYHQL 149
T + ++ + T K TL N D++L+ KK T N
Sbjct: 123 STGQTPTEKTDS-TPKSSGSTLPTSSTPATQNPTDSSLSTKPPTKKTGETQSPTENSIST 181
Query: 150 PLVATQVSSGGVTNIVGAAGLPKAVTKQTVILTYQSQQYAPQAGQTKADATGVRATPPKT 209
AT + G T+ P + Q+ ++ Q G T+ + TP
Sbjct: 182 EESATTPTPSGSTSPTS----PNNASPQSSTRPGETTAIPKQTGPTQPPGSTKITTPQHE 237
Query: 210 QPPGKYTFQTNQLPRPQYPA 229
PG+ T T + P P PA
Sbjct: 238 TKPGETTVSTPKAPGPTQPA 257
>SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5)
Length = 215
Score = 33.1 bits (72), Expect = 0.22
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 9 SKGAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDKNGNGGSTE 68
SK +KKRD+ + + R + R R +S R+ + RR +K D++
Sbjct: 18 SKSSKKRDRRSRSRSRERRRRSKSRDRDSRSRTSSRRRSRSSERRHRKD-DRSRESSYDS 76
Query: 69 DLRGDDVLSGRSTPLARPRKETA 91
GD SG S A+ R + A
Sbjct: 77 RRSGDKDDSGSSKDKAKQRMKDA 99
>SB_5325| Best HMM Match : Drf_FH1 (HMM E-Value=0.41)
Length = 638
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 2 RQSGHSESKGAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDKN 61
R+S +SESK + S+S N N+ L RG FG RR S+ + + K H
Sbjct: 348 RESRNSESKPSS----SSSKNRNTGLERGRVQDFGRDRRDYSSDKNRKEVPKTMKVHQDF 403
Query: 62 GN 63
GN
Sbjct: 404 GN 405
>SB_11727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1261
Score = 31.9 bits (69), Expect = 0.51
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 10/151 (6%)
Query: 92 GQPLRTNRFGFRQSHAKTAKVGDLTLAAEQAFEAPNDKDTALNNN-ALDKKITSNYHQL- 149
G + T+ AK K LT++ + + + ++ + D + NY+ +
Sbjct: 204 GSEMGTSSVACSLEVAKEEKEESLTISGTSSAKTHDQENLEFPQPVSADLQSIENYYSIC 263
Query: 150 PLVATQVSSGGVTNIVGAAGLPKAVTKQTVILTYQSQQYAPQAGQTKADATGVRATPPKT 209
+ G T+I + +TKQ ++ +SQ++A QA T AT T P+
Sbjct: 264 EDTKAGLKIEGATDIDVGLNEYETITKQEIL---ESQEFA-QAPATPRSAT----TNPED 315
Query: 210 QPPGKYTFQTNQLPRPQYPAVKNIDAKATKQ 240
PG + P P KNI+A ++ Q
Sbjct: 316 SSPGNRKAANRETPPPGTSTPKNIEAASSLQ 346
>SB_59266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 678
Score = 31.5 bits (68), Expect = 0.67
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 8 ESKGAKKRDKSASGNGNSKLTRGVATSFGFRRRPAS-TSRADDNARRKQKQHDKNG---- 62
+S KRD SA+ N + R+ S T + +AR + ++N
Sbjct: 288 KSTSPPKRDSSATQNDARMIENASRDQLESRKDQESHTEKPRKHARPRTASRERNQEIAS 347
Query: 63 --NGGSTEDLRGDDV-LSGRSTPLARPRKETAGQ 93
NGGS ED+ D++ ++ P +PR T Q
Sbjct: 348 EPNGGSLEDMSHDELAVAASEKPKPKPRTRTISQ 381
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 31.5 bits (68), Expect = 0.67
Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Query: 118 AAEQAFEAPNDKD-TALNNNALDKKITSNYHQLPLVATQVSSGGVTNIVGAAGLPKAVTK 176
A+ +A AP DK +A+ N + S Y+ P +ATQ G A +
Sbjct: 1490 ASVEAMPAPADKPVSAMYGNTSPQTPVSPYNAFPNMATQPQEGQSQQTAALASFQDSQNS 1549
Query: 177 QTVILTYQSQQYAPQAGQTKADATGVRATPPKTQPPGKYTFQTNQ 221
+ + SQ + + + A+ + ++ KT+ K+ + Q
Sbjct: 1550 KKHVAQEPSQNVSYEDLEHSAEGSAIKPGDGKTEQEPKHLEEVQQ 1594
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 31.1 bits (67), Expect = 0.88
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 38 RRRPASTSRADDNARRKQKQHDKNGNGGSTEDLRGDDVLSGRSTPLARPRK 88
+RRP S + + +R +K K + RGD+ GRSTP+ PR+
Sbjct: 3148 KRRP-SPGPIESSVKRSEKSTPKRSPSPAAGKQRGDEA-KGRSTPVQTPRR 3196
>SB_292| Best HMM Match : HEAT (HMM E-Value=4.6e-29)
Length = 1239
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 37 FRRRPASTSRADDNARRKQKQHDKNGNGGSTEDLRGD--DVLSGRSTPLARPR 87
FR + S ++ D +++KQ ++D+NG G ST + V +S AR R
Sbjct: 433 FRDKAESLLKSLDASKQKQLENDRNGGGASTRKTSTNRAPVRQAKSASTARSR 485
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 29.5 bits (63), Expect = 2.7
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 5 GHSESKGAKKRDKSASGNGNSKLTR-GVATSFGFRRRPASTSRADDNARRKQKQHDKNGN 63
G S+S R S +SK T G SF RR + RA +R++ + +KNG
Sbjct: 622 GQSDSSDRSSRRHEESDTSSSKDTEDGGDDSFARRR---AERRARLERKRQEAEAEKNGT 678
Query: 64 GGST--EDLRGDDVLSGR 79
ST E GD+ S R
Sbjct: 679 SISTTSETTNGDESRSAR 696
>SB_51639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/49 (42%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Query: 5 GHSESKGAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARR 53
G E K A+KRDK NS L SF F R PAS R RR
Sbjct: 75 GDQERKYAQKRDKEGKKKKNSPL------SFVFARTPASGLRIAKGTRR 117
>SB_19213| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 29.5 bits (63), Expect = 2.7
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Query: 3 QSGHSESKGAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDKNG 62
Q GHS +KG + RD+S+ G R +S G + ++ + + D++
Sbjct: 35 QQGHSRTKGDRIRDQSSQGRTKWDRIRD-QSSQGRTKWDRIRDQSSQGRTKLDRIRDQSS 93
Query: 63 NGGSTEDLRGDDVLSGRSTPLARPRKETAGQPLRTNRFGFRQSHAKT 109
G + D D GR T L R R +++ + +R + S T
Sbjct: 94 QGRTKWDRIRDQSSQGR-TKLDRIRDQSSQGRTKWDRIRDQSSQGLT 139
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 29.1 bits (62), Expect = 3.6
Identities = 40/162 (24%), Positives = 60/162 (37%), Gaps = 13/162 (8%)
Query: 84 ARPRKETAGQPLRTNRFGFRQSHAK-TAKVGDLTLAAEQAFEA------PNDKDTALNNN 136
A+P E +G+P ++ + A TA T AA A A P+ +
Sbjct: 1561 AKPESERSGEPADEHKLKEAVAAAAVTATAVATTGAAVAAASATTKGKSPSKTSATKATH 1620
Query: 137 ALDKKITSNYHQLPLVATQVSSGGVTNIVGAAGL-PKAVTKQTVILTYQSQQYAPQAGQT 195
A + K T G T GAA P+AV +T + +S A + G T
Sbjct: 1621 AKNPKSAKPGSSSTKPGTSAKPGAATAKPGAASAKPEAVPAKTGAASTKSGPSAAKPGST 1680
Query: 196 KADATGVR-ATPPKTQPPGKYTFQ----TNQLPRPQYPAVKN 232
K+ + PP P + Q N+ RP+ A K+
Sbjct: 1681 KSGTLSAKTGEPPSRTPASRPALQKKAEENKPERPKSAAAKS 1722
>SB_37902| Best HMM Match : RPH3A_effector (HMM E-Value=7.6e-10)
Length = 314
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 76 LSGRSTPLARPRKETAGQPLRT----NRFGFRQSHAKTAK-VGDLTLAAEQAFEAPNDKD 130
L+ R P + P PL + N + +R +T K +GD+ + AE + PND+
Sbjct: 35 LNRREEPFSNPHPPIYHHPLSSYSLLNYYFYRLQPQRTLKNMGDIEVEAENRWTCPNDRQ 94
Query: 131 TAL 133
L
Sbjct: 95 LVL 97
>SB_11348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Query: 14 KRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHDKNGNGGS 66
KR + NGN K T AT R++ + ++ A+RKQ+Q+D NGN +
Sbjct: 130 KRQRQQKDNGNKKTT---ATKRQ-RQQNGNDNKTTTAAKRKQRQND-NGNNAN 177
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 160 GVTNIVGAAGLPKAVTKQTV---ILTYQSQQYAPQAGQTKADATGVRATPPKTQPPGKYT 216
GV +VG G V + + + ++ ++ + PP TQPPG+
Sbjct: 109 GVARLVGVVGAGAGVVSRGLTSKVAKHEDTMVLAESKKNSISELMSEPPPPGTQPPGQGG 168
Query: 217 FQ-TNQLPRPQYPA 229
+ NQ P YPA
Sbjct: 169 YPGYNQPPPGHYPA 182
>SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 1151
Score = 29.1 bits (62), Expect = 3.6
Identities = 30/133 (22%), Positives = 48/133 (36%), Gaps = 10/133 (7%)
Query: 7 SESKGAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQH--DKNGNG 64
+E +R K SG+ + G+ T +R+ ST DD ++ + H DK +G
Sbjct: 779 TEPSRCSERSKLPSGDTTASSEDGLVTRRSTKRKSESTD--DDMPSKRSRAHAKDKRASG 836
Query: 65 GSTEDLRGDDVLSGRSTPLARPRKETAGQPLRTNRFGFRQSHA-KTAKVGDLTLAA---- 119
R V R + +++ F H K + DL L
Sbjct: 837 SRVASSRKQSVSVSRGKASTKTKEQKTHSQQSAQDFSTASKHKDKQNRNKDLLLKVAPGK 896
Query: 120 -EQAFEAPNDKDT 131
EQA + N K +
Sbjct: 897 KEQASTSKNQKSS 909
>SB_48437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4247
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 187 QYAPQAGQTKADATGVRATPPKTQPPGKYTFQTNQLPRPQYPAVKNIDAKATKQVKCCLN 246
Q+ +GQ D KT+P + +T+ LP+ + P + D K + CCLN
Sbjct: 2682 QWNDGSGQKSTDRQEKPIAGGKTKPSPSGSIKTD-LPKSELPEIIIKDEKICLNLLCCLN 2740
>SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1346
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 84 ARPRKET-AGQPLRTNRF-GFRQSHAKTAKVGDLTLAAEQAFEAPNDKDTALNNNALDKK 141
ARP+ E+ +G R +R G A V + T +AE EAP K + N +K
Sbjct: 895 ARPQAESESGNTDRNSRAPGVSAKQAVKKLVHERTKSAELKREAPERKQKTMENAKTLEK 954
Query: 142 ITSNY 146
I SN+
Sbjct: 955 IPSNF 959
>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 1093
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 38 RRRPAST-SRADDNARRKQKQHDKNGNGGSTEDLRGDDVLSGRSTPLARPRKETAGQP 94
+R P ST S + + + KQ K +T L GD+V + + PR E GQP
Sbjct: 129 QRIPRSTASLSVSSLKPVDKQISKQATSTATVPLSGDEVQIPKIPAIPYPRFEQCGQP 186
>SB_18529| Best HMM Match : DUF1388 (HMM E-Value=3.5)
Length = 435
Score = 28.7 bits (61), Expect = 4.7
Identities = 48/246 (19%), Positives = 91/246 (36%), Gaps = 13/246 (5%)
Query: 2 RQSGHSESKGAKKRDKSASGNGNSKLTRGVATSFGFRRR-PASTSRADDNARR-KQKQHD 59
+ G + + K + N+K +R TS + TSR +R K K D
Sbjct: 65 KTKGKTRTSSKTKTSHKTKTSRNTKTSRKTKTSSNTKTSLKTKTSRNTKTSRNTKTKPQD 124
Query: 60 KNG----NGGSTEDLRGDDVLSGRSTPLARPRKETAGQPLRTNRFGFRQSH-AKTAKVGD 114
KN + +D + R ARPR+ + +P + + SH +T++
Sbjct: 125 KNKPQDQDKPQDQDQGARPRQATRPRQAARPRQASRPRPRGNTKTSRKTSHKTETSRKTK 184
Query: 115 LTLAAEQAFEAPNDKDTALNNNALDKKITSNYHQLPLVATQVSSGGVTNIVGAAGLPKAV 174
+L + + + ++T + + T Q A + S A P+
Sbjct: 185 TSLKTKTSLKTKTSRNTKTSRKTKTSRKTKTKPQDQDQAARPSQAARPR---QAARPRQA 241
Query: 175 TKQTVILTYQSQQYAPQAGQTK-ADATGVRATPPKTQPPGKYTFQTNQLPRPQYPAVKNI 233
++ + ++ QA + + + G A P + P + Q +Q RP+ P+ K
Sbjct: 242 SRPRQAARPRQRERTGQASRPRQRERPGQAARPGQAATPRQAADQ-DQAARPR-PSCKTK 299
Query: 234 DAKATK 239
+ TK
Sbjct: 300 PSPKTK 305
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 28.3 bits (60), Expect = 6.2
Identities = 40/186 (21%), Positives = 64/186 (34%), Gaps = 8/186 (4%)
Query: 48 DDNARRKQKQHDKNGNGGSTEDLRGDDVLSGRSTPLARPRKETAGQPLRTNRFGFRQ-SH 106
DD+ D +G G +D + + PL R T + FGF + S
Sbjct: 448 DDDDDDDDDDDDDDGGGDDDDDYERGAINHSNAGPLENVRIPTDKNTGQQRSFGFVEFSS 507
Query: 107 AKTAKVGDLTLAAEQAFEAPNDKDTALNNNALDKKITSNYHQLPLVATQVSSGGVTNIVG 166
+ L + ++ + NN D IT N L+ T +G ++
Sbjct: 508 PVSVHYASELLDGIRLYDRAINVKPQSNNQ--DAAITPNRQSPLLLLTPKHNGRQKDLEN 565
Query: 167 AAGLPKAVTKQTVILTYQSQQYAPQAGQTKADATGVRATPPKTQPPGKYTFQTNQLPRPQ 226
+ P+ + Q Q+ QAG G+ P+ G F + QLP
Sbjct: 566 SFERPEFRRSHS-----QPGQFWQQAGAQFPSHPGMFPYTPEMVSRGHPPFVSPQLPPNT 620
Query: 227 YPAVKN 232
YP +N
Sbjct: 621 YPQRQN 626
>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
Length = 1258
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 124 EAPNDKDTALNNNALDKKITS-NYHQLPLVATQ 155
+ PN +TALNN+ L+ I Y Q+ LV+ Q
Sbjct: 358 QQPNSNNTALNNHTLNSHIPKPAYQQIVLVSMQ 390
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 27.9 bits (59), Expect = 8.2
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 8 ESKGAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRAD-DNARRKQKQHDKNGNGGS 66
ES + +S G GNSK+ + ++ +T +D N ++KQ +
Sbjct: 1112 ESMDFEVEPESMLGRGNSKID--AISQMAANQKIKTTKMSDVGNDIEQEKQPRNTPKLNN 1169
Query: 67 TEDLRGDDVLSGRSTP 82
++DL GD+ +S S P
Sbjct: 1170 SDDLLGDENMSSSSLP 1185
>SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 18 SASGNGNSKLTRGVATSFGFRRRPASTSRADDNAR--RKQKQHDKNGNGGSTEDLRG 72
SA G GN + G +S R R +TSR R +++ H + G + RG
Sbjct: 244 SARGRGNRRGRTGTRSSTRGRSRSTATSRGRTRTRTSTRRRSHTSSREGTRSRSTRG 300
>SB_4588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 729
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 9 SKGAKKRDKSASGNGNSKLTRGVATSFGFRRRPASTSRADDNARRKQKQHD 59
++ +++RD+ SG +S+ R V R+R + ARR++ Q D
Sbjct: 113 ARSSRRRDQDGSGYISSRRRREVEKEEEERQREEEEEEERERARRRKDQED 163
>SB_58243| Best HMM Match : DUF584 (HMM E-Value=1.5)
Length = 1308
Score = 27.9 bits (59), Expect = 8.2
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 38 RRRPASTSRADDNARRKQKQHDKNGNGGSTEDLRGDDVLSGRSTPLARPRKETAGQPLRT 97
RRR ++ R D + D G+G S + G + G S P ++ R T LR
Sbjct: 351 RRRASTEERTRDRIMERSINSDNTGSGASLDKEHGSE--RGSSVP-SKGRPFT----LRN 403
Query: 98 NRFGFRQSHAK 108
RF ++S +K
Sbjct: 404 KRFRMKRSSSK 414
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 27.9 bits (59), Expect = 8.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 191 QAGQTKADATGVRATPPKTQPPGKYTFQTNQLPR 224
+AG + DAT ++ PK QP + T N PR
Sbjct: 2303 KAGLAREDATFKSSSQPKPQPTAQQTILKNTKPR 2336
>SB_25011| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 27.9 bits (59), Expect = 8.2
Identities = 28/103 (27%), Positives = 35/103 (33%), Gaps = 3/103 (2%)
Query: 125 APNDKDTALNNNALDKKITSNYHQLPLVATQVSSGGVTNIVGAAGLPKAVTKQTVILTYQ 184
APN A NNNAL ++SN L + + S G +N + A T
Sbjct: 546 APNVSSNASNNNAL-SNVSSN-GTLAISPEPLPSNGSSNAIALAMQTTPTPAPTPAPAPV 603
Query: 185 SQQYAPQAGQTKADATGVRATPPKTQPPGKYTFQTNQLPRPQY 227
PQ Q T TP G Y +T R Y
Sbjct: 604 GTTAVPQQAQGPG-PTVTYGTPDPYNDDGNYFSKTQSYHRRHY 645
>SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 190 PQAGQTKADATGVRATPPKTQPPGKYTFQTNQLPRPQYPAVKNIDAKATKQ 240
P +K+ T R TP + P K + +Q PR Q +D T++
Sbjct: 241 PSKTSSKSSRTSSRTTPARATPSRKSSRTPSQTPRSQQRKTPKLDLLWTRK 291
>SB_3296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/35 (40%), Positives = 17/35 (48%)
Query: 172 KAVTKQTVILTYQSQQYAPQAGQTKADATGVRATP 206
K T +LT + P GQ K ATG +ATP
Sbjct: 19 KTGTGLVTLLTGSASYEPPAKGQRKRSATGTQATP 53
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.309 0.125 0.351
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,499,245
Number of Sequences: 59808
Number of extensions: 370476
Number of successful extensions: 1070
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1049
Number of HSP's gapped (non-prelim): 46
length of query: 246
length of database: 16,821,457
effective HSP length: 80
effective length of query: 166
effective length of database: 12,036,817
effective search space: 1998111622
effective search space used: 1998111622
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 59 (27.9 bits)
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