GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002466-TA|BGIBMGA002466-PA|undefined
         (55 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F210BE Cluster: PREDICTED: hypothetical protein;...    33   0.86 
UniRef50_Q9XY49 Cluster: Chymotrypsin-like serine protease; n=1;...    30   8.0  

>UniRef50_UPI0000F210BE Cluster: PREDICTED: hypothetical protein;
          n=3; Danio rerio|Rep: PREDICTED: hypothetical protein -
          Danio rerio
          Length = 528

 Score = 33.5 bits (73), Expect = 0.86
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 14 DALKAGYGVCEVIVHHEVVRGEARQRVQGWSPFSAAIS 51
          D + A YG+ +   HH+  RGE  QR +  SP S+ +S
Sbjct: 15 DQISASYGLTKPQTHHQTERGEFLQRRRPASPVSSCVS 52


>UniRef50_Q9XY49 Cluster: Chymotrypsin-like serine protease; n=1;
           Ctenocephalides felis|Rep: Chymotrypsin-like serine
           protease - Ctenocephalides felis (Cat flea)
          Length = 228

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 5   NDLPLYVVIDALKAGYGVCEVIVHHEVVRGEARQRVQGW 43
           ND+ L  V  A+K    V  + +H + +RG  + ++ GW
Sbjct: 89  NDIALIKVSSAIKLSKNVRPIKLHKDFIRGGEKLKITGW 127


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.320    0.133    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,757,971
Number of Sequences: 1657284
Number of extensions: 1324148
Number of successful extensions: 2674
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2672
Number of HSP's gapped (non-prelim): 2
length of query: 55
length of database: 575,637,011
effective HSP length: 35
effective length of query: 20
effective length of database: 517,632,071
effective search space: 10352641420
effective search space used: 10352641420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 65 (30.3 bits)