GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002466-TA|BGIBMGA002466-PA|undefined
         (55 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          21   5.8  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          21   5.8  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          21   5.8  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          21   5.8  

>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 25 VIVHHEVVRGEARQRVQGWSPF 46
          VI HH +++G +   V   SPF
Sbjct: 36 VIGHHRILQGPSIADVFAVSPF 57


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 25 VIVHHEVVRGEARQRVQGWSPF 46
          VI HH +++G +   V   SPF
Sbjct: 36 VIGHHRILQGPSIADVFAVSPF 57


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 25 VIVHHEVVRGEARQRVQGWSPF 46
          VI HH +++G +   V   SPF
Sbjct: 36 VIGHHRILQGPSIADVFAVSPF 57


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 25 VIVHHEVVRGEARQRVQGWSPF 46
          VI HH +++G +   V   SPF
Sbjct: 36 VIGHHRILQGPSIADVFAVSPF 57


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.133    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,499
Number of Sequences: 2123
Number of extensions: 1113
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 55
length of database: 516,269
effective HSP length: 34
effective length of query: 21
effective length of database: 444,087
effective search space:  9325827
effective search space used:  9325827
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.4 bits)
S2: 40 (20.2 bits)