GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002465-TA|BGIBMGA002465-PA|IPR002110|Ankyrin
         (225 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    25   0.76 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.3  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   4.1  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   5.4  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     22   5.4  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   5.4  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    21   7.1  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    21   9.4  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    21   9.4  

>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 24.6 bits (51), Expect = 0.76
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query: 13  TPQTSKPALKTVEPQESSDRTELNVPSDAKDANEY 47
           TP+ + P L T + + S+   ++  P  A  A EY
Sbjct: 225 TPRKAPPQLSTTDKKGSAIDLDIGPPLHADQAEEY 259


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 6/43 (13%)

Query: 73  KKVHKKQ-ELKDKLKRLF-----DIRLSNGDTYLHMILCSNQS 109
           K VH+KQ E+   ++ +      D+ LSN D YL+    SN +
Sbjct: 346 KIVHEKQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNN 388


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 6/43 (13%)

Query: 73  KKVHKKQ-ELKDKLKRLF-----DIRLSNGDTYLHMILCSNQS 109
           K VH+KQ E+   ++ +      D+ LSN D YL+    SN +
Sbjct: 384 KIVHEKQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNN 426


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/26 (30%), Positives = 18/26 (69%)

Query: 14  PQTSKPALKTVEPQESSDRTELNVPS 39
           P+T+K   + V+P ++S++ +L + S
Sbjct: 146 PETTKVDTREVQPHDASEKEQLGLAS 171


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 6    SARSRQQTPQTSKPALKTVEPQESSDRTELNVP 38
            S +++QQ PQ  +   +  +PQ+ S + +   P
Sbjct: 1497 SQKTQQQQPQQQQQQQQQQQPQQQSQQPQQQQP 1529



 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/47 (21%), Positives = 17/47 (36%)

Query: 3    QTDSARSRQQTPQTSKPALKTVEPQESSDRTELNVPSDAKDANEYSA 49
            Q    + +QQ PQ      +  +PQ    + +       +   EY A
Sbjct: 1506 QQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQKEYGA 1552


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 143  ANDLSHYVTLLVSKGSSVSLQDVAG 167
            A D+S Y T  +S+G   SL  + G
Sbjct: 1691 AEDISPYATFQLSEGGGGSLAGLGG 1715


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 143  ANDLSHYVTLLVSKGSSVSLQDVAG 167
            A D+S Y T  +S+G   SL  + G
Sbjct: 1687 AEDISPYATFQLSEGGGGSLAGLGG 1711


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)

Query: 31  DRTELNVPSDAKDANEY 47
           DR E N P   KDA+ Y
Sbjct: 611 DRVEQNEPIGCKDASSY 627


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 25  EPQESSDRTELNVPSDAKDANEYSAYYNAQDGLEV 59
           EP+E      L+VPSD     +   Y NA    EV
Sbjct: 93  EPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEV 127


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)

Query: 13  TPQTSKPALKTVEPQESSDRT 33
           +PQ S+  ++T+ PQ S DRT
Sbjct: 402 SPQ-SQSTIQTLRPQVSPDRT 421


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/44 (22%), Positives = 22/44 (50%)

Query: 25  EPQESSDRTELNVPSDAKDANEYSAYYNAQDGLEVKQLLRELTQ 68
           +P E   +   N PS+ +D ++Y   +  +  +   QL+ E ++
Sbjct: 351 QPSEEDLKRITNQPSEGEDISDYKFRHITEITILTVQLIVEFSK 394


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 25  EPQESSDRTELNVPSDAKDANEYSAYYNAQDGLEV 59
           EP+E      L+VPSD     +   Y NA    EV
Sbjct: 93  EPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNYEV 127


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 22  KTVEPQESSDRTELNVPSDAKDANEYSAY 50
           K   P E+   T +++PSD  + +  S +
Sbjct: 340 KKYPPSETEQSTSMDLPSDQVEPDNSSNF 368


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 22  KTVEPQESSDRTELNVPSDAKDANEYSAY 50
           K   P E+   T +++PSD  + +  S +
Sbjct: 340 KKYPPSETEQSTSMDLPSDQVEPDNSSNF 368


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.129    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,817
Number of Sequences: 429
Number of extensions: 2455
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 15
length of query: 225
length of database: 140,377
effective HSP length: 55
effective length of query: 170
effective length of database: 116,782
effective search space: 19852940
effective search space used: 19852940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)