GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002464-TA|BGIBMGA002464-PA|IPR002110|Ankyrin
         (334 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   0.59 
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...    25   1.0  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 67  VHKKQELKDKLKRLFDIRLSNGDTYLHMILCSNQSSIANMVTIIDSVKMTHLLDYRNLKL 126
           + K +++  KL R+F    S  D   + + C ++ +   +     SV + H  D +NL L
Sbjct: 84  IPKHRKVAGKLIRIFLAAESIDDLLSNAVFCRDRVN-PYLFYYAFSVALLHRPDTQNLDL 142

Query: 127 QTYLHM 132
            +++H+
Sbjct: 143 PSFIHV 148


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 156 LLDYRNLKLQTLLHTAIANDLSHYVTLLVSKGSSVSLQDVAGDTAFHYAAK--SHKCLEP 213
           L DY N++ ++ LH  +       + +    G +++L+    DT  +  AK    + + P
Sbjct: 56  LSDY-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 114

Query: 214 ----LLAAVKKHNIPFDLNTYNYEKQAPLHL 240
               L+ A K+      L+ YN +K++ LHL
Sbjct: 115 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 145



 Score = 24.6 bits (51), Expect = 1.0
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 156 LLDYRNLKLQTLLHTAIANDLSHYVTLLVSKGSSVSLQDVAGDTAFHYAAK--SHKCLEP 213
           L DY N++ ++ LH  +       + +    G +++L+    DT  +  AK    + + P
Sbjct: 132 LSDY-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 190

Query: 214 ----LLAAVKKHNIPFDLNTYNYEKQAPLHL 240
               L+ A K+      L+ YN +K++ LHL
Sbjct: 191 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 221



 Score = 24.6 bits (51), Expect = 1.0
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 156 LLDYRNLKLQTLLHTAIANDLSHYVTLLVSKGSSVSLQDVAGDTAFHYAAK--SHKCLEP 213
           L DY N++ ++ LH  +       + +    G +++L+    DT  +  AK    + + P
Sbjct: 208 LSDY-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 266

Query: 214 ----LLAAVKKHNIPFDLNTYNYEKQAPLHL 240
               L+ A K+      L+ YN +K++ LHL
Sbjct: 267 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 297



 Score = 24.6 bits (51), Expect = 1.0
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 156 LLDYRNLKLQTLLHTAIANDLSHYVTLLVSKGSSVSLQDVAGDTAFHYAAK--SHKCLEP 213
           L DY N++ ++ LH  +       + +    G +++L+    DT  +  AK    + + P
Sbjct: 284 LSDY-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 342

Query: 214 ----LLAAVKKHNIPFDLNTYNYEKQAPLHL 240
               L+ A K+      L+ YN +K++ LHL
Sbjct: 343 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 373



 Score = 24.6 bits (51), Expect = 1.0
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 156 LLDYRNLKLQTLLHTAIANDLSHYVTLLVSKGSSVSLQDVAGDTAFHYAAK--SHKCLEP 213
           L DY N++ ++ LH  +       + +    G +++L+    DT  +  AK    + + P
Sbjct: 436 LSDY-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 494

Query: 214 ----LLAAVKKHNIPFDLNTYNYEKQAPLHL 240
               L+ A K+      L+ YN +K++ LHL
Sbjct: 495 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 525



 Score = 24.6 bits (51), Expect = 1.0
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 156 LLDYRNLKLQTLLHTAIANDLSHYVTLLVSKGSSVSLQDVAGDTAFHYAAK--SHKCLEP 213
           L DY N++ ++ LH  +       + +    G +++L+    DT  +  AK    + + P
Sbjct: 512 LSDY-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 570

Query: 214 ----LLAAVKKHNIPFDLNTYNYEKQAPLHL 240
               L+ A K+      L+ YN +K++ LHL
Sbjct: 571 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 601



 Score = 24.6 bits (51), Expect = 1.0
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 7/91 (7%)

Query: 156 LLDYRNLKLQTLLHTAIANDLSHYVTLLVSKGSSVSLQDVAGDTAFHYAAK--SHKCLEP 213
           L DY N++ ++ LH  +       + +    G +++L+    DT  +  AK    + + P
Sbjct: 588 LSDY-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 646

Query: 214 ----LLAAVKKHNIPFDLNTYNYEKQAPLHL 240
               L+ A K+      L+ YN +K++ LHL
Sbjct: 647 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 677



 Score = 22.2 bits (45), Expect = 5.5
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 7/91 (7%)

Query: 156 LLDYRNLKLQTLLHTAIANDLSHYVTLLVSKGSSVSLQDVAGDTAFHYAAK--SHKCLEP 213
           L DY N++ ++ LH  +       + +    G +++L+    DT  +  AK    + + P
Sbjct: 360 LSDY-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 418

Query: 214 ----LLAAVKKHNIPFDLNTYNYEKQAPLHL 240
                + A K+      L+ YN +K++ LHL
Sbjct: 419 DQQRSIFAGKQLEDGRTLSDYNIQKESTLHL 449


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.130    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,305
Number of Sequences: 317
Number of extensions: 3067
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 10
length of query: 334
length of database: 114,650
effective HSP length: 57
effective length of query: 277
effective length of database: 96,581
effective search space: 26752937
effective search space used: 26752937
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)