Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002464-TA|BGIBMGA002464-PA|IPR002110|Ankyrin
(334 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 47 4e-06
SPBP16F5.05c |||ribosome biogenesis protein Nop8|Schizosaccharom... 42 1e-04
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 35 0.019
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 34 0.033
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 31 0.17
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 30 0.40
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 30 0.53
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 29 0.93
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 29 1.2
SPCP1E11.10 |||ankyrin repeat protein, unknown biological role|S... 28 2.1
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 27 2.8
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 27 2.8
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 27 3.7
SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyc... 27 3.7
SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces p... 27 5.0
SPBC1773.12 |||transcription factor |Schizosaccharomyces pombe|c... 27 5.0
SPAP27G11.04c |||tRNA specific adenosine deaminase subunit Tad3 ... 27 5.0
SPBPB2B2.01 |||amino acid permease, unknown 12|Schizosaccharomyc... 26 8.7
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 26 8.7
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 8.7
SPCC18.17c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 26 8.7
>SPAC2F7.10 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 642
Score = 46.8 bits (106), Expect = 4e-06
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Query: 166 TLLHTAIANDLSHYVTLLVSKGSSVSLQDVAGDTAFHYAAKSHKCLEPLLAAVKKHNIPF 225
+L A +L L+ S+ V+ D G TA H+AA + + P+ + +H
Sbjct: 3 SLFLAASQGELDTVKNLISSEKIDVNATDEGGATALHWAALNQQI--PICKFLLEHGA-- 58
Query: 226 DLNTYNYEKQA-PLH-LARTG--QNARHLLESGADHRVRDMHGRTPLHLAAYDSRLALVA 281
D+N + QA P+H A+ G + +L++ GAD ++D G LHLA + + LV
Sbjct: 59 DVNAIGGDLQAAPIHWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLAVHAASPLLVV 118
Query: 282 ALLDYIPSKEIDATDESGNTAL 303
LL S +D D+ +T L
Sbjct: 119 YLLHLDIS--VDLRDDQQHTPL 138
Score = 28.7 bits (61), Expect = 1.2
Identities = 31/120 (25%), Positives = 44/120 (36%), Gaps = 7/120 (5%)
Query: 168 LHTAIANDLSHYVTLLVSKGSSVSLQDVAGDTAFHYAAKSHKCLEPLLAAVKKHNIPFDL 227
+H A V LV G+ L+D G H A + PLL H + +
Sbjct: 72 IHWAAKRGSVKTVHYLVQHGADPLLKDKQGFNCLHLAVHA---ASPLLVVYLLH-LDISV 127
Query: 228 NTYNYEKQAPLHLARTGQN---ARHLLESGADHRVRDMHGRTPLHLAAYDSRLALVAALL 284
+ + ++ PL A N LL GAD D TPLH + L + +L
Sbjct: 128 DLRDDQQHTPLMWASYHGNEPITNCLLRWGADVLATDEDKMTPLHWSIVGGNLKCMKLIL 187
>SPBP16F5.05c |||ribosome biogenesis protein
Nop8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 41.9 bits (94), Expect = 1e-04
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 260 RDMHGRTPLHLAAYDSRLALVAALLDYIPSKEIDATDESGNTALQIVCGGPLRQNSVEIV 319
RD +G + LH+A+ + +A+V ++ Y+ + I+A +ESGNTA+ EI
Sbjct: 32 RDENGNSGLHMASANGHIAVVQKIIPYLNKEVINAQNESGNTAMHWAA----LNGHAEIC 87
Query: 320 KLLL 323
KLLL
Sbjct: 88 KLLL 91
Score = 28.7 bits (61), Expect = 1.2
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 190 VSLQDVAGDTAFHYA-AKSH-KCLEPLLAAVKKHNIPFDLNTYNYEKQAPLHLARTGQNA 247
+S +D G++ H A A H ++ ++ + K I N N +H A +A
Sbjct: 29 LSRRDENGNSGLHMASANGHIAVVQKIIPYLNKEVI----NAQNESGNTAMHWAALNGHA 84
Query: 248 ---RHLLESGADHRVRDMHGRTPLHLAAYDSRLALVAALLDY 286
+ LLE+G D +++++ ++P++ A ++ ++ LD+
Sbjct: 85 EICKLLLEAGGDPHIKNIYEKSPIYEADIRNQQKVMDLFLDF 126
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 34.7 bits (76), Expect = 0.019
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 136 SNQSSIANMVTIIDSVKMTHLLDYR--NLKLQTLLHTAIANDLSHYVTLLVSKGSSVSLQ 193
S +S+I ++ +L D+ N ++LLH A LS+ T L + G V+ +
Sbjct: 832 SVESTILAAFALVTDTTTPYLSDFSLVNESGRSLLHLTAACGLSNASTFLCNAGCDVNKR 891
Query: 194 DVAGDTAFHYAA 205
D G T HYA+
Sbjct: 892 DALGYTPLHYAS 903
Score = 33.1 bits (72), Expect = 0.057
Identities = 48/184 (26%), Positives = 74/184 (40%), Gaps = 19/184 (10%)
Query: 133 ILCSNQSSIANMVTIIDSVKMTHLLDYRNLKLQTLLHTAIANDLSHYVTLLVSKGSSVSL 192
+L S + A +T +S+K + + +TLLH + L ++ +V K S+ S
Sbjct: 773 LLSSWRDDFAQYIT--NSIKQPPNSESKGQSKKTLLHDSNMESLKSVISRIVKKDSNQS- 829
Query: 193 QDVAGDTAFHYAAKSHKCLEPLLAAVKKHNIPFDLNTYNYEKQAPLHL-ARTG-QNARHL 250
D T A P L+ D + N ++ LHL A G NA
Sbjct: 830 DDSVESTILAAFALVTDTTTPYLS---------DFSLVNESGRSLLHLTAACGLSNASTF 880
Query: 251 L-ESGADHRVRDMHGRTPLHLAA-YDSRLALVAALLDYIPSKEIDATDESGNTALQIVCG 308
L +G D RD G TPLH A+ YD + V L + + D SG + +
Sbjct: 881 LCNAGCDVNKRDALGYTPLHYASLYDHKDICVNLLSN---GAKPDVIGASGKKPIDLSSS 937
Query: 309 GPLR 312
P++
Sbjct: 938 EPIK 941
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 33.9 bits (74), Expect = 0.033
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 252 ESGADHRV--RDMHGRTPLHLAAYDSRLALVAALLDYIPSKEIDATDESGNTALQIVCGG 309
+SG R+ +D +GRT LH+A +++ + V +LL + +ESG TAL
Sbjct: 38 KSGQKLRINQKDRYGRTVLHIAVSENKNSFVRSLLQHKGIDVFVQDEESGYTALH----R 93
Query: 310 PLRQNSVEIVKLLLAKKKS 328
+ ++E LLL+K S
Sbjct: 94 AIYVGNLEAASLLLSKDPS 112
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 31.5 bits (68), Expect = 0.17
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 127 QTYLHMILCSNQSSIANMVTIIDSVKMTHLLDYRNLKLQTLLHTAIANDLSHYVTLLVSK 186
QT LH + SI + + D K L+ ++L+ QT LH A A V L+S+
Sbjct: 108 QTCLHYAAGKGRLSIVQL--LCD--KAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLISQ 163
Query: 187 GSSVSLQDVAGDTAFHYA-AKSH 208
+ ++ D G T H+A A+ H
Sbjct: 164 RAPLNTSDSYGFTPLHFALAEGH 186
Score = 31.1 bits (67), Expect = 0.23
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 197 GDTAFHYAA-KSHKCLEPLLAAVKKHNIPFDLNTYNYEKQAPLH-LARTG--QNARHLLE 252
G T HYAA K + LL P + + + Q PLH A G Q ++L+
Sbjct: 107 GQTCLHYAAGKGRLSIVQLLC----DKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLIS 162
Query: 253 SGADHRVRDMHGRTPLHLA 271
A D +G TPLH A
Sbjct: 163 QRAPLNTSDSYGFTPLHFA 181
Score = 30.3 bits (65), Expect = 0.40
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Query: 253 SGADHRVRDMHGRTPLHLAAYDSRLALVAALLDYIPSKEIDATDESGNTALQIVCGGPLR 312
S D + G+T LH AA RL++V L D P + I D G T L
Sbjct: 96 SDVDPTITTRGGQTCLHYAAGKGRLSIVQLLCDKAP-ELIRKKDLQGQTPLHRAAA---- 150
Query: 313 QNSVEIVKLLLAKKKSL 329
+++VK L++++ L
Sbjct: 151 VGKIQVVKYLISQRAPL 167
Score = 29.1 bits (62), Expect = 0.93
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 258 RVRDMHGRTPLHLAAYDSRLALVAALLDYIPSKEIDATDESGNTALQIVCGGPLRQNSVE 317
R +D+ G+TPLH AA ++ +V L+ ++ +D G T L VE
Sbjct: 135 RKKDLQGQTPLHRAAAVGKIQVVKYLIS--QRAPLNTSDSYGFTPLHFALAEGHPDVGVE 192
Query: 318 IVK 320
+V+
Sbjct: 193 LVR 195
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 222 NIPFDLNTYNYEKQAPLHLARTGQNAR---HLLESGADHRVRDMHGRTPLHLA 271
N F + PLH A T +NA+ LL +GAD + + +G+TP ++
Sbjct: 421 NFQFYPKNVHLHTSTPLHYAVTQKNAKLVAKLLRNGADPAMLNGNGKTPFEIS 473
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 29.9 bits (64), Expect = 0.53
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 19 QESSDRTELNVPSDAKDANEYS-AYYNAQDGLEVKQLLRELTQIIRNKKVHKKQELKDKL 77
+E+S S+ K+ NE S A +D V + +LT+++++K V + KD+
Sbjct: 136 EENSSIAHPEKESEEKETNEASPASEEDEDDFNVAWEVLDLTRVMQSKAVDAYPDSKDEK 195
Query: 78 KRLFDI 83
RL DI
Sbjct: 196 IRLADI 201
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 29.1 bits (62), Expect = 0.93
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 245 QNARHLLES-GADHRVRDMHGRTPLHLAAYDSRLALVAALLDYIPSKEIDATDESGNTAL 303
Q +H+L D D + TPLHLAA R +V ALL + P + + + A
Sbjct: 69 QMVKHILSVFDVDVNAYDKNKNTPLHLAAMAGRQDIVEALLLH-PDINYNLVNANNKKAY 127
Query: 304 QI 305
Q+
Sbjct: 128 QV 129
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 10 KPAPKTVEPQESSDRTELNVPSDAKDANEYSAYYNAQDGLEVKQLLRELTQIIRNKKVHK 69
KPAP V P + E+N D+K + +D K+ R + + KK K
Sbjct: 403 KPAP-VVAPAAPTVEAEVNGVEDSKKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKKEKK 461
Query: 70 -KQELKDKLKR 79
K+E K+K K+
Sbjct: 462 EKKEKKEKKKK 472
>SPCP1E11.10 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 251 LESGADHRVRDMHGRTPLHLAAYDSRLALVAALLDYIPSKEIDATDESGNTALQIVC 307
L+SG D +G TP+H A L+ L++ +I+ D+ G T L VC
Sbjct: 24 LDSGISPNAADENGYTPIHAAVSYGHSDLLKILVE--RGGDINIRDQDGETPL-FVC 77
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 166 TLLHTAIANDLSHYVTLLVSKGSSVSLQDVAGDTAFHYAAK 206
T +H A++ S + +LV +G ++++D G+T K
Sbjct: 39 TPIHAAVSYGHSDLLKILVERGGDINIRDQDGETPLFVCEK 79
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 24 RTELNVPSDAKDANEYSAYYNAQDGLEVKQLLRELTQIIRNKKVHKKQELKDKLKRLFD 82
+TE N +N S+ + E +QLLREL I + +K ++Q L+++ R +
Sbjct: 140 KTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQERK--REQMLQEEKNRALE 196
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 43 YNAQDGLEVK-QLLRELTQIIRNKKVHKKQELKDKLKRLFDIRL 85
YN G+ VK Q+L EL +II KK + + D LK+ + RL
Sbjct: 1430 YNRAYGIMVKSQMLSELEEIIDYKKNMQYENNLDSLKKTWRKRL 1473
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 52 KQLLRELTQIIRNKKVHKKQELK----DKLKRLFDIRLSNGDTYLHMILCSNQS--SIAN 105
+ L+ E+ +R+K +HKK E K +++R D L + YL + ++ S I
Sbjct: 516 EDLIEEVVNRLRDKAIHKKAEEKRADERRIRRKID-NLRSAIKYLKPPISADASYDEIRP 574
Query: 106 MVTIIDSVKMTHLLDYRNLKLQTYLHMI 133
+++I+ H ++R Y+ +
Sbjct: 575 LISILPEFAALHSEEHRMAAFDKYIRRL 602
>SPAC15A10.03c |rhp54|rad54|Rad54 homolog Rhp54|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 852
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 132 MILCSNQSSIANMVTIIDSVKMTHLLDYRNLKLQTLLH-TAIANDLSHYVTLL 183
M+LC + N DS+ T LD N++ + +L T I NDLS Y +LL
Sbjct: 406 MLLCDEGHRLKNS----DSLTFT-ALDKLNVQRRVILSGTPIQNDLSEYFSLL 453
>SPAC20G8.09c |||N-acetyltransferase Nat10 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1033
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 163 KLQTLLHTAIANDLSHYVTLLVSKG----SSVSLQDVAGDTAFHYAAKSHKCLEPLLAAV 218
+++ L+ + D + YV+ + ++G S SL V+ DT F Y S L+ +++
Sbjct: 471 RIELWLNKLLCLDAASYVSRMATQGFPHPSECSLYRVSRDTLFSYHPISEAFLQRMMSLY 530
Query: 219 KKHNIPFDLNTYNYEKQAPLH 239
+ N AP H
Sbjct: 531 VASHYKNSPNDLQLMSDAPAH 551
>SPBC1773.12 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 594
Score = 26.6 bits (56), Expect = 5.0
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 52 KQLLRELTQIIRNKKVHKKQELKDKLKRLFDIRLSNGDTYLHMILCSNQSSIANMVTIID 111
+++ +E IR K + ++ L D+LK+ +D+ NG T + NQ V I
Sbjct: 399 EEVYKEAVLSIRGKLIVWERNLPDELKQYYDVIKLNG-TIPKNVDFENQHIFTACVEIYL 457
Query: 112 SVKMTHLLDY 121
S +T L Y
Sbjct: 458 SYCITQLYFY 467
>SPAP27G11.04c |||tRNA specific adenosine deaminase subunit Tad3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 315
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 57 ELTQIIRNKKVHKKQELKDKLKRLFDIRLSNGDTYLHMILCSNQSSIANMV 107
++TQ ++ + +K+ L RL I+ NG L +I+C +S AN +
Sbjct: 52 KVTQYVKQIRSKQKESLLH-CNRLRRIQDENGSLELQIIICPEKSMTANEI 101
>SPBPB2B2.01 |||amino acid permease, unknown 12|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 585
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 250 LLESGADHRVRDMHG--RTPLHLAAYDSRLALVAALLDYI 287
LL SGAD R+ HG +P LA D+ + + ++L+ I
Sbjct: 327 LLISGADPRLTSYHGVDASPFVLAIKDANIKALPSILNAI 366
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 25.8 bits (54), Expect = 8.7
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 190 VSLQDVAGDTAFHYAAK--SHKCLEPLLAAVKKHNIPFDLNTYNYEKQAPLHLARTGQNA 247
V+LQD GDT+ AA+ + C+ LL+ +IP + A +L +
Sbjct: 362 VNLQDSNGDTSLLIAARNGAMDCVNSLLSYNANPSIP-----NRQRRTASEYLLEADKKP 416
Query: 248 RHLLE--SGADHRVRDMHGRTPLHLAAYDSRLALVAAL 283
LL+ S A H G +P ++ S A V A+
Sbjct: 417 HSLLQSNSNASHSAFSFSGISPAIISPSCSSHAFVKAI 454
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/52 (21%), Positives = 29/52 (55%)
Query: 33 AKDANEYSAYYNAQDGLEVKQLLRELTQIIRNKKVHKKQELKDKLKRLFDIR 84
AK+ +++ DG + + EL Q+ R+++ + ++ KD + +L+ ++
Sbjct: 3995 AKNYMFVQMHHSLYDGWSLSLMYDELMQLYRDEQGNSRKPFKDYIIQLYSLK 4046
>SPCC18.17c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 488
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 234 KQAPLHLARTGQNARHLLESGADH 257
+ +P+ +A G RHLLE+ DH
Sbjct: 410 QNSPIQIASEGFAIRHLLEAEGDH 433
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.130 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,500,239
Number of Sequences: 5004
Number of extensions: 61833
Number of successful extensions: 281
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 257
Number of HSP's gapped (non-prelim): 34
length of query: 334
length of database: 2,362,478
effective HSP length: 73
effective length of query: 261
effective length of database: 1,997,186
effective search space: 521265546
effective search space used: 521265546
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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