GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002464-TA|BGIBMGA002464-PA|IPR002110|Ankyrin
         (334 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   4.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   4.9  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   6.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   6.5  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   8.6  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   8.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 65  KKVHKKQ-ELKDKLKRLF-----DIRLSNGDTYLHMILCSNQSS----IANMVTIIDSVK 114
           K VH+KQ E+   ++ +      D+ LSN D YL+    SN +      A +   I  V+
Sbjct: 346 KIVHEKQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSATVKAAISEVQ 405

Query: 115 MTHLLDYRNLKLQTYLHMILCSNQSSIANMVTIIDSVKMTHLLD 158
              L        +  ++ + C  +S I  +   + S++ T+  D
Sbjct: 406 RVVLGRLCEKVAKQLVNSVNCLRESFIGTLQRCLLSLEKTYERD 449


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 65  KKVHKKQ-ELKDKLKRLF-----DIRLSNGDTYLHMILCSNQSS----IANMVTIIDSVK 114
           K VH+KQ E+   ++ +      D+ LSN D YL+    SN +      A +   I  V+
Sbjct: 384 KIVHEKQQEITGLIQNIIQEMKNDVLLSNNDVYLYQNTMSNNNQRTEWSATVKAAISEVQ 443

Query: 115 MTHLLDYRNLKLQTYLHMILCSNQSSIANMVTIIDSVKMTHLLD 158
              L        +  ++ + C  +S I  +   + S++ T+  D
Sbjct: 444 RVVLGRLCEKVAKQLVNSVNCLRESFIGTLQRCLLSLEKTYERD 487


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 8/26 (30%), Positives = 17/26 (65%)

Query: 6   PQTNKPAPKTVEPQESSDRTELNVPS 31
           P+T K   + V+P ++S++ +L + S
Sbjct: 146 PETTKVDTREVQPHDASEKEQLGLAS 171


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 173  ANDLSHYVTLLVSKGSSVSLQDVAG 197
            A D+S Y T  +S+G   SL  + G
Sbjct: 1691 AEDISPYATFQLSEGGGGSLAGLGG 1715


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 173  ANDLSHYVTLLVSKGSSVSLQDVAG 197
            A D+S Y T  +S+G   SL  + G
Sbjct: 1687 AEDISPYATFQLSEGGGGSLAGLGG 1711


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/20 (35%), Positives = 15/20 (75%)

Query: 222 NIPFDLNTYNYEKQAPLHLA 241
           ++P D++ YN E+Q+ + +A
Sbjct: 57  SLPIDVDVYNTEQQSTVFVA 76


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)

Query: 23  DRTELNVPSDAKDANEY 39
           DR E N P   KDA+ Y
Sbjct: 611 DRVEQNEPIGCKDASSY 627


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 17  EPQESSDRTELNVPSDAKDANEYSAYYNAQDGLEV 51
           EP+E      L+VPSD     +   Y NA    EV
Sbjct: 93  EPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEV 127


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/44 (22%), Positives = 22/44 (50%)

Query: 17  EPQESSDRTELNVPSDAKDANEYSAYYNAQDGLEVKQLLRELTQ 60
           +P E   +   N PS+ +D ++Y   +  +  +   QL+ E ++
Sbjct: 351 QPSEEDLKRITNQPSEGEDISDYKFRHITEITILTVQLIVEFSK 394


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.130    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,535
Number of Sequences: 429
Number of extensions: 4005
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 9
length of query: 334
length of database: 140,377
effective HSP length: 58
effective length of query: 276
effective length of database: 115,495
effective search space: 31876620
effective search space used: 31876620
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)