Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002462-TA|BGIBMGA002462-PA|IPR013982|AICARFT/IMPCHase
bienzyme, formylation region, IPR002695|AICARFT/IMPCHase bienzyme,
IPR011607|MGS-like
(589 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical pr... 704 0.0
U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical pr... 394 e-109
U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical pr... 222 6e-58
AF000264-10|AAC71129.2| 272|Caenorhabditis elegans Hypothetical... 31 3.0
AF003140-4|AAD47120.1| 814|Caenorhabditis elegans Hypothetical ... 30 4.0
AF003140-3|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ... 30 4.0
AF003140-2|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ... 30 4.0
Z81039-3|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 29 7.0
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 29 7.0
>U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical
protein C55F2.1b protein.
Length = 594
Score = 704 bits (1740), Expect = 0.0
Identities = 339/591 (57%), Positives = 429/591 (72%), Gaps = 11/591 (1%)
Query: 6 ALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPEMLGGRVK 65
A++SVSDKTGL+ LA L GL LIASGGTA A+R+ G+ V DV+D+T+ PEMLGGRVK
Sbjct: 8 AIISVSDKTGLIPLAHGLVSAGLTLIASGGTAKAIRDQGIDVHDVADVTKFPEMLGGRVK 67
Query: 66 TLHPAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVADAVENIDI 125
TLHPAVH GILAR ++SD++D+++ +SVVVCNLYPF +TV D +V +AVENIDI
Sbjct: 68 TLHPAVHGGILARDTESDRKDLEKHNISFVSVVVCNLYPFKKTVQSKDCSVEEAVENIDI 127
Query: 126 GGVTLLRAAAKNHDRVTVVCDPADYDAVVKEIKENKHHQTTLGTRQRLALKAFTHTSDYD 185
GGVTLLRAAAKNH+RV+V+CDPADYD ++ E+K TT RQ LALKAF HT+ YD
Sbjct: 128 GGVTLLRAAAKNHERVSVICDPADYDHIISELKSGG---TTRERRQLLALKAFEHTTSYD 184
Query: 186 LAISDYFRKQYSP-GQAQLTLRYGMNPHQKP-AQVFTTRDSLPITTLNGAPGFINLCDAL 243
+IS + R++++ G+ L LRYG NPHQK A+++ D +PI LNG+PG+IN+ D L
Sbjct: 185 ESISGFMRRRFAGNGERALPLRYGTNPHQKDDAELYIVEDEMPIKVLNGSPGYINILDGL 244
Query: 244 NAWQLVKELKEALSLPAAASFKHVSPAGAAVGLPLTDEEAAVCMVAG-----ELSXXXXX 298
N WQLVKEL +A +PAAASFKHVSPAGAAVGLPL + EAA CMV+ +
Sbjct: 245 NGWQLVKELSDATKMPAAASFKHVSPAGAAVGLPLNETEAACCMVSDLPIDTKKPSLAAA 304
Query: 299 XXXXXXXXXMSSFGDFVALSDPCDVSTATIISREVSDGVIAPGYSPEALKLLSKKKGGNY 358
MSSFGDF+ALS+ CD TA II+REVSDGV+AP + P AL LL+KKK GNY
Sbjct: 305 YARARGADRMSSFGDFIALSEKCDELTAKIINREVSDGVVAPDFDPAALSLLAKKKNGNY 364
Query: 359 CVLKIDPTYEPSLMEQKTIFGLTLEQKRNDAKITAELFKNVVTTKKDLPSNAVRDLIVAT 418
CVLKI+P Y PS E++T+FGL L QKRN+A I AE F NVV + +L A+ DLIVAT
Sbjct: 365 CVLKINPNYLPSETEERTVFGLRLRQKRNNAVINAETFNNVVGSANELNKQAIDDLIVAT 424
Query: 419 IALKYTQSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALWWLRRHPSVLAMRFRQGV 478
IALKY QSNSVCFA GQVIG+GAGQQSRIHCTRLAG KA WWLR+HP+VL++ ++ +
Sbjct: 425 IALKYAQSNSVCFAHRGQVIGMGAGQQSRIHCTRLAGDKAMNWWLRQHPTVLSLPWKNAI 484
Query: 479 TRAVQANAIDNYVNGTVGSDLPLEQWDTLFEGKPPALFTDSQREEWIKKMDKVALASDAF 538
R+ ++NAID +G +GS++ ++QW F +P + R++W+ + V ++SDAF
Sbjct: 485 KRSEKSNAIDVLCSGVLGSEIAIDQWQQYF-NEPVEPLAEDDRKQWLSQQTGVVMSSDAF 543
Query: 539 FPFRDNIDRAVQCGVEYIGSPSGSNNDQEVIEACNEHKIALAHTNLRLFHH 589
PFRDN+D A Q GV Y+ P GS D ++ EAC+EH I L HT LRLFHH
Sbjct: 544 LPFRDNVDCAKQFGVSYVAHPGGSVRDDDIKEACDEHGITLIHTGLRLFHH 594
>U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical
protein C55F2.1c protein.
Length = 393
Score = 394 bits (969), Expect = e-109
Identities = 191/331 (57%), Positives = 240/331 (72%), Gaps = 7/331 (2%)
Query: 176 KAFTHTSDYDLAISDYFRKQYSP-GQAQLTLRYGMNPHQKP-AQVFTTRDSLPITTLNGA 233
KAF HT+ YD +IS + R++++ G+ L LRYG NPHQK A+++ D +PI LNG+
Sbjct: 45 KAFEHTTSYDESISGFMRRRFAGNGERALPLRYGTNPHQKDDAELYIVEDEMPIKVLNGS 104
Query: 234 PGFINLCDALNAWQLVKELKEALSLPAAASFKHVSPAGAAVGLPLTDEEAAVCMVAG--- 290
PG+IN+ D LN WQLVKEL +A +PAAASFKHVSPAGAAVGLPL + EAA CMV+
Sbjct: 105 PGYINILDGLNGWQLVKELSDATKMPAAASFKHVSPAGAAVGLPLNETEAACCMVSDLPI 164
Query: 291 --ELSXXXXXXXXXXXXXXMSSFGDFVALSDPCDVSTATIISREVSDGVIAPGYSPEALK 348
+ MSSFGDF+ALS+ CD TA II+REVSDGV+AP + P AL
Sbjct: 165 DTKKPSLAAAYARARGADRMSSFGDFIALSEKCDELTAKIINREVSDGVVAPDFDPAALS 224
Query: 349 LLSKKKGGNYCVLKIDPTYEPSLMEQKTIFGLTLEQKRNDAKITAELFKNVVTTKKDLPS 408
LL+KKK GNYCVLKI+P Y PS E++T+FGL L QKRN+A I AE F NVV + +L
Sbjct: 225 LLAKKKNGNYCVLKINPNYLPSETEERTVFGLRLRQKRNNAVINAETFNNVVGSANELNK 284
Query: 409 NAVRDLIVATIALKYTQSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALWWLRRHPS 468
A+ DLIVATIALKY QSNSVCFA GQVIG+GAGQQSRIHCTRLAG KA WWLR+HP+
Sbjct: 285 QAIDDLIVATIALKYAQSNSVCFAHRGQVIGMGAGQQSRIHCTRLAGDKAMNWWLRQHPT 344
Query: 469 VLAMRFRQGVTRAVQANAIDNYVNGTVGSDL 499
VL++ ++ + R+ ++NAID +G +GS++
Sbjct: 345 VLSLPWKNAIKRSEKSNAIDVLCSGVLGSEV 375
>U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical
protein C55F2.1a protein.
Length = 420
Score = 222 bits (542), Expect = 6e-58
Identities = 100/184 (54%), Positives = 131/184 (71%), Gaps = 1/184 (0%)
Query: 406 LPSNAVRDLIVATIALKYTQSNSVCFARDGQVIGIGAGQQSRIHCTRLAGGKAALWWLRR 465
L A+ DLIVATIALKY QSNSVCFA GQVIG+GAGQQSRIHCTRLAG KA WWLR+
Sbjct: 238 LNKQAIDDLIVATIALKYAQSNSVCFAHRGQVIGMGAGQQSRIHCTRLAGDKAMNWWLRQ 297
Query: 466 HPSVLAMRFRQGVTRAVQANAIDNYVNGTVGSDLPLEQWDTLFEGKPPALFTDSQREEWI 525
HP+VL++ ++ + R+ ++NAID +G +GS++ ++QW F +P + R++W+
Sbjct: 298 HPTVLSLPWKNAIKRSEKSNAIDVLCSGVLGSEIAIDQWQQYF-NEPVEPLAEDDRKQWL 356
Query: 526 KKMDKVALASDAFFPFRDNIDRAVQCGVEYIGSPSGSNNDQEVIEACNEHKIALAHTNLR 585
+ V ++SDAF PFRDN+D A Q GV Y+ P GS D ++ EAC+EH I L HT LR
Sbjct: 357 SQQTGVVMSSDAFLPFRDNVDCAKQFGVSYVAHPGGSVRDDDIKEACDEHGITLIHTGLR 416
Query: 586 LFHH 589
LFHH
Sbjct: 417 LFHH 420
Score = 200 bits (487), Expect = 3e-51
Identities = 108/204 (52%), Positives = 131/204 (64%), Gaps = 22/204 (10%)
Query: 225 LPITTLNGAPGFINLCDALNAWQLVKELKEALSLPAAASFKHVSPAGAAVGLPLTDEE-- 282
+PI LNG+PG+IN+ D LN WQLVKEL +A +PAAASFKHVSPAGAAVGLPL + E
Sbjct: 1 MPIKVLNGSPGYINILDGLNGWQLVKELSDATKMPAAASFKHVSPAGAAVGLPLNETEAA 60
Query: 283 ----------------AAVCMVAGE----LSXXXXXXXXXXXXXXMSSFGDFVALSDPCD 322
AA A E ++ MSSFGDF+ALS+ CD
Sbjct: 61 CCMVSDLPIDTKKPSLAAAYARAREQDWMIADRLQRIAPSIGADRMSSFGDFIALSEKCD 120
Query: 323 VSTATIISREVSDGVIAPGYSPEALKLLSKKKGGNYCVLKIDPTYEPSLMEQKTIFGLTL 382
TA II+REVSDGV+AP + P AL LL+KKK GNYCVLKI+P Y PS E++T+FGL L
Sbjct: 121 ELTAKIINREVSDGVVAPDFDPAALSLLAKKKNGNYCVLKINPNYLPSETEERTVFGLRL 180
Query: 383 EQKRNDAKITAELFKNVVTTKKDL 406
QKRN+A I AE F NVV + ++
Sbjct: 181 RQKRNNAVINAETFNNVVGSANEV 204
>AF000264-10|AAC71129.2| 272|Caenorhabditis elegans Hypothetical
protein F43E2.7a protein.
Length = 272
Score = 30.7 bits (66), Expect = 3.0
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 377 IFGLTLEQKRNDAKIT-AELFKNVVTTKKDLPSNAVRDLIVATIALKYTQSNSVCFARD- 434
I G L Q + + ++T AE F+ V+ N RD ++ +A+ + +VCFAR
Sbjct: 50 IGGPLLNQDKEEDELTDAESFRRVIR-------NGFRDSVIRVVAVTAARPFAVCFARQV 102
Query: 435 GQVIG 439
QVIG
Sbjct: 103 AQVIG 107
>AF003140-4|AAD47120.1| 814|Caenorhabditis elegans Hypothetical
protein C44E4.1b protein.
Length = 814
Score = 30.3 bits (65), Expect = 4.0
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 503 QWDTLFEGKPPALFTDSQREEWIKKMDKVALASDAFFPFRDNI 545
+W+ + G PP+ TD Q I K D++ L ++ NI
Sbjct: 310 KWEQIDSGAPPSGATDHQNRSRITKKDQIMLMTEQLATITSNI 352
>AF003140-3|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
protein C44E4.1a protein.
Length = 2712
Score = 30.3 bits (65), Expect = 4.0
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 503 QWDTLFEGKPPALFTDSQREEWIKKMDKVALASDAFFPFRDNI 545
+W+ + G PP+ TD Q I K D++ L ++ NI
Sbjct: 2208 KWEQIDSGAPPSGATDHQNRSRITKKDQIMLMTEQLATITSNI 2250
>AF003140-2|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
protein C44E4.1c protein.
Length = 2710
Score = 30.3 bits (65), Expect = 4.0
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 503 QWDTLFEGKPPALFTDSQREEWIKKMDKVALASDAFFPFRDNI 545
+W+ + G PP+ TD Q I K D++ L ++ NI
Sbjct: 2206 KWEQIDSGAPPSGATDHQNRSRITKKDQIMLMTEQLATITSNI 2248
>Z81039-3|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 29.5 bits (63), Expect = 7.0
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 52 DITRAPEMLGGRVKTLHPAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSK 111
++ +P+ + AV I +SD++ D+ R+K E S++ N+ Q +++
Sbjct: 972 ELVDSPDQVENEEPERVEAVTENIRQEMSDAEMRDLMRKKREQYSMLFPNVPQPFQPLNR 1031
Query: 112 PDVTVADA 119
DVT A
Sbjct: 1032 FDVTAPGA 1039
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 29.5 bits (63), Expect = 7.0
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 52 DITRAPEMLGGRVKTLHPAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSK 111
++ +P+ + AV I +SD++ D+ R+K E S++ N+ Q +++
Sbjct: 972 ELVDSPDQVENEEPERVEAVTENIRQEMSDAEMRDLMRKKREQYSMLFPNVPQPFQPLNR 1031
Query: 112 PDVTVADA 119
DVT A
Sbjct: 1032 FDVTAPGA 1039
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.132 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,519,825
Number of Sequences: 27539
Number of extensions: 546145
Number of successful extensions: 1222
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1203
Number of HSP's gapped (non-prelim): 11
length of query: 589
length of database: 12,573,161
effective HSP length: 85
effective length of query: 504
effective length of database: 10,232,346
effective search space: 5157102384
effective search space used: 5157102384
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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