GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002459-TA|BGIBMGA002459-PA|IPR008388|ATPase, V1 complex,
subunit S1
         (359 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    28   0.46 
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.4  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   5.6  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    24   7.5  

>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 27.9 bits (59), Expect = 0.46
 Identities = 17/53 (32%), Positives = 25/53 (47%)

Query: 119 IRDVYMNMQELQRGPIVAFYTGKTNPAVIEKPRFISIEPMPSVNNLDVTVVSE 171
           ++ VY+ +++ QR  I  + T K    V E    I   PM  V N+ V V  E
Sbjct: 155 VKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIVPTPMLGVWNISVEVEGE 207


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 64  PYKVLAQIFHSLHYN-TFHLDSAYNLSLKSASYIYVFFNDYENETRTMALRRH 115
           P  +L ++    HY+ + ++ +A   +L+SAS    F +DYE      A  +H
Sbjct: 823 PVYMLQRMAEQTHYDPSTYVRAAVKTALESASEADEFDDDYEFSQNAQAAVKH 875


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 156 EPMPSVNNLDVTVVSEGAMFRFSGVTVATPTRRATFNQMPVVAEE-TWS 203
           E + ++  LD+ V+++G    F G   AT +        P +A+  TW+
Sbjct: 143 ELLSAIQQLDLVVLNQGTTSTFDGNGAATASIVDVAFATPTIAQPGTWN 191


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 15/46 (32%), Positives = 24/46 (52%)

Query: 11  RETIKRTEGIIIFVEELLSFEEITAKDKLGTPFTHLRRGLIERKVK 56
           R  + RTE  I   EELL   EIT ++ + +     R  L ++K++
Sbjct: 158 RTRVIRTEEYIPTQEELLEEAEITERENIKSLERFRRMELEKQKIR 203


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.136    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 353,419
Number of Sequences: 2123
Number of extensions: 13825
Number of successful extensions: 37
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 35
Number of HSP's gapped (non-prelim): 4
length of query: 359
length of database: 516,269
effective HSP length: 65
effective length of query: 294
effective length of database: 378,274
effective search space: 111212556
effective search space used: 111212556
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 48 (23.4 bits)