GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002459-TA|BGIBMGA002459-PA|IPR008388|ATPase, V1 complex,
subunit S1
         (359 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51044-1|AAB01143.1|  554|Drosophila melanogaster alpha esterase...    33   0.61 
AY051497-1|AAK92921.1|  566|Drosophila melanogaster GH15053p pro...    31   2.4  
AE014297-631|AAF54003.2|  566|Drosophila melanogaster CG2505-PA ...    31   2.4  
AY119109-1|AAM50969.1|  531|Drosophila melanogaster RE09630p pro...    30   4.3  
AE014297-3419|AAO41597.1|  531|Drosophila melanogaster CG12268-P...    30   4.3  
AE014297-3418|AAF56210.1|  531|Drosophila melanogaster CG12268-P...    30   4.3  
AY047572-1|AAK77304.1|  352|Drosophila melanogaster GH08429p pro...    29   7.5  
AE014296-2730|AAF49467.1|  352|Drosophila melanogaster CG4680-PA...    29   7.5  
AE014134-2737|AAF53544.1|  796|Drosophila melanogaster CG4631-PA...    29   9.9  

>U51044-1|AAB01143.1|  554|Drosophila melanogaster alpha esterase
           protein.
          Length = 554

 Score = 33.1 bits (72), Expect = 0.61
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 161 VNNLDVTVVSEGAMFRFSGVTVATPTRRATFNQMPV-VAEETWSRNKLSTKVAYTDFELL 219
           V NLD   V    +F F  V     T    + + P  +  E W  N +   V    FE L
Sbjct: 286 VINLDE--VRSFLLFAFGPVIEPYETDHCVWPKRPKDLLSEAWG-NDIPVIVGGNSFEGL 342

Query: 220 FNFDLTRQDEWVLEN 234
           F++ L R+D W L+N
Sbjct: 343 FSYQLVRKDPWALKN 357


>AY051497-1|AAK92921.1|  566|Drosophila melanogaster GH15053p
           protein.
          Length = 566

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 200 ETWSRNKLSTKVAYTDFELLFNFDLTRQDEWVLEN 234
           E W  N +   V    FE LF++ L R+D W L+N
Sbjct: 336 EAWG-NDIPVIVGGNSFEGLFSYQLVRKDPWALKN 369


>AE014297-631|AAF54003.2|  566|Drosophila melanogaster CG2505-PA
           protein.
          Length = 566

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 200 ETWSRNKLSTKVAYTDFELLFNFDLTRQDEWVLEN 234
           E W  N +   V    FE LF++ L R+D W L+N
Sbjct: 336 EAWG-NDIPVIVGGNSFEGLFSYQLVRKDPWALKN 369


>AY119109-1|AAM50969.1|  531|Drosophila melanogaster RE09630p
           protein.
          Length = 531

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 330 LAQGITVLFNCASNSKFDDPHNP 352
           LA  + V+F+CA+N +FD P  P
Sbjct: 112 LASNVEVVFHCAANVRFDQPLRP 134


>AE014297-3419|AAO41597.1|  531|Drosophila melanogaster CG12268-PB,
           isoform B protein.
          Length = 531

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 330 LAQGITVLFNCASNSKFDDPHNP 352
           LA  + V+F+CA+N +FD P  P
Sbjct: 112 LASNVEVVFHCAANVRFDQPLRP 134


>AE014297-3418|AAF56210.1|  531|Drosophila melanogaster CG12268-PA,
           isoform A protein.
          Length = 531

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 330 LAQGITVLFNCASNSKFDDPHNP 352
           LA  + V+F+CA+N +FD P  P
Sbjct: 112 LASNVEVVFHCAANVRFDQPLRP 134


>AY047572-1|AAK77304.1|  352|Drosophila melanogaster GH08429p
           protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 65  YKVLAQIFHSL-HYNTFHLDSAYNLSLKSASYIYVFFNDYENETRTMALRRHDTIIRDVY 123
           Y+ +A++ H L +    H D+ Y+L       + VF +     T +M LRR+   + + Y
Sbjct: 136 YQKMAKLKHRLINRKLTHNDTLYSLEDIERITLQVFRDHLPEPTHSMILRRNPKSMEEAY 195

Query: 124 MNMQELQR 131
             + E+Q+
Sbjct: 196 RYIVEVQQ 203


>AE014296-2730|AAF49467.1|  352|Drosophila melanogaster CG4680-PA
           protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 65  YKVLAQIFHSL-HYNTFHLDSAYNLSLKSASYIYVFFNDYENETRTMALRRHDTIIRDVY 123
           Y+ +A++ H L +    H D+ Y+L       + VF +     T +M LRR+   + + Y
Sbjct: 136 YQKMAKLKHRLINRKLTHNDTLYSLEDIERITLQVFRDHLPEPTHSMILRRNPKSMEEAY 195

Query: 124 MNMQELQR 131
             + E+Q+
Sbjct: 196 RYIVEVQQ 203


>AE014134-2737|AAF53544.1|  796|Drosophila melanogaster CG4631-PA
           protein.
          Length = 796

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 3/38 (7%)

Query: 250 FAKAPWNWSYACGEPLQIVNTRDGS-SIAIPRYRIQPL 286
           F   PW+W +   +P +++    G   + IPRYR QPL
Sbjct: 343 FNGMPWSWLHR--DPQRMIRLPSGGLPLEIPRYRRQPL 378


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.136    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,389,212
Number of Sequences: 52641
Number of extensions: 653827
Number of successful extensions: 1193
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1187
Number of HSP's gapped (non-prelim): 9
length of query: 359
length of database: 24,830,863
effective HSP length: 86
effective length of query: 273
effective length of database: 20,303,737
effective search space: 5542920201
effective search space used: 5542920201
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)