GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002458-TA|BGIBMGA002458-PA|IPR000276|Rhodopsin-like GPCR
superfamily, IPR000611|Neuropeptide Y receptor
         (251 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    47   2e-07
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    46   2e-07
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    42   5e-06
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    42   6e-06
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    40   2e-05
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    40   2e-05
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    38   7e-05
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   1.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.0  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 21/42 (50%), Positives = 25/42 (59%)

Query: 19  WPFGAVMCKVVNFSQAVSVLVSAYTLLAISIDRYIVIMRPLK 60
           W  G V CKV+ F Q V    S Y L+A+SIDRY  I  P+K
Sbjct: 90  WYAGNVACKVIRFLQVVVTYASTYVLVALSIDRYDAIRHPMK 131



 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 198 LAMSHSCYNPLIYCYMNAKY 217
           LA  +S  NP+IYC  +  +
Sbjct: 295 LAPLNSAANPIIYCLFSTHF 314


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 46.4 bits (105), Expect = 2e-07
 Identities = 20/41 (48%), Positives = 26/41 (63%)

Query: 19  WPFGAVMCKVVNFSQAVSVLVSAYTLLAISIDRYIVIMRPL 59
           W  G V+CK++ F QAV    S Y L+A+SIDRY  I  P+
Sbjct: 112 WYAGNVLCKIIRFLQAVVTYSSTYVLVALSIDRYDAITHPM 152


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 41.9 bits (94), Expect = 5e-06
 Identities = 34/127 (26%), Positives = 47/127 (37%), Gaps = 2/127 (1%)

Query: 19  WPFGAVMCKVVNFSQAVSVLVSAYTLLAISIDRYIVIMRPLKP-RLXXXXXXXXXXXXXX 77
           W  G  MCK V F +      S  T+LAIS +RY  I +PLK   +              
Sbjct: 136 WVLGREMCKAVPFVELTVAHASVLTILAISFERYYAICKPLKAGYICTKTRASLICLLAW 195

Query: 78  XXXXXXXXXXXVSQLQRPSPWHEACKVDICSEQWADGKQSEHYTFALLTLQFTLPLTALV 137
                      V    +   + +  KV  C    A+   S  Y   ++ L F +PL  L+
Sbjct: 196 FIAALFTSPMLVIAEYKQLDYFDGSKVPAC-HTLANTFWSALYFLTIIFLFFIIPLIILL 254

Query: 138 YTYGRIA 144
             Y  IA
Sbjct: 255 ILYCIIA 261



 Score = 25.8 bits (54), Expect = 0.32
 Identities = 9/20 (45%), Positives = 15/20 (75%)

Query: 202 HSCYNPLIYCYMNAKYRHGF 221
           +S  NP++Y  M++K+R GF
Sbjct: 343 NSAINPILYNLMSSKFRTGF 362


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 41.5 bits (93), Expect = 6e-06
 Identities = 19/42 (45%), Positives = 23/42 (54%)

Query: 19  WPFGAVMCKVVNFSQAVSVLVSAYTLLAISIDRYIVIMRPLK 60
           W  G  MCK V F +      S  T+LAIS +RY  I +PLK
Sbjct: 136 WVLGREMCKAVPFVELTVAHASVLTILAISFERYYAICKPLK 177



 Score = 24.6 bits (51), Expect = 0.73
 Identities = 8/20 (40%), Positives = 15/20 (75%)

Query: 202 HSCYNPLIYCYMNAKYRHGF 221
           +S  NP++Y  +++K+R GF
Sbjct: 345 NSAVNPILYNIISSKFRSGF 364


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 39.9 bits (89), Expect = 2e-05
 Identities = 25/127 (19%), Positives = 55/127 (43%), Gaps = 5/127 (3%)

Query: 19  WPFGAVMCKVVNFSQAVSVLVSAYTLLAISIDRYIVIMRPLKPRLXXXXXXXXXXXXXXX 78
           W  G  MC+++ F +   + +S++ L+ IS+DR+  +++PL  R                
Sbjct: 119 WYAGDAMCRIMMFFRMFGLYLSSFILVCISVDRFYAVLKPLYLRALDRRDKFMLLGAWLG 178

Query: 79  XXXXXXXXXXVSQLQ-RPS-PWHEACKVDICSEQWADGKQSEHYTFALLTLQFTLPLTAL 136
                     V  ++  P+  W++ C        +A   +  +  F ++ + + LPL  +
Sbjct: 179 ATLCSIPQMVVFHVESHPNITWYQQCVTYNVFPTYA--HELTYLLFGMV-MMYALPLAVI 235

Query: 137 VYTYGRI 143
           +++Y  I
Sbjct: 236 IFSYASI 242


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 39.9 bits (89), Expect = 2e-05
 Identities = 25/127 (19%), Positives = 55/127 (43%), Gaps = 5/127 (3%)

Query: 19  WPFGAVMCKVVNFSQAVSVLVSAYTLLAISIDRYIVIMRPLKPRLXXXXXXXXXXXXXXX 78
           W  G  MC+++ F +   + +S++ L+ IS+DR+  +++PL  R                
Sbjct: 119 WYAGDAMCRIMMFFRMFGLYLSSFILVCISVDRFYAVLKPLYLRALDRRDKFMLLGAWLG 178

Query: 79  XXXXXXXXXXVSQLQ-RPS-PWHEACKVDICSEQWADGKQSEHYTFALLTLQFTLPLTAL 136
                     V  ++  P+  W++ C        +A   +  +  F ++ + + LPL  +
Sbjct: 179 ATLCSIPQMVVFHVESHPNITWYQQCVTYNVFPTYA--HELTYLLFGMV-MMYALPLAVI 235

Query: 137 VYTYGRI 143
           +++Y  I
Sbjct: 236 IFSYASI 242


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 37.9 bits (84), Expect = 7e-05
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 22  GAVMCKVVNFSQAVSVLVSAYTLLAISIDRYIVIMRPL 59
           G ++CKVV + Q +   +S+Y L+A +IDR+  I  PL
Sbjct: 109 GFLLCKVVKYGQTLGPYLSSYVLMATAIDRHQAICYPL 146


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 7/39 (17%)

Query: 179 DEDWAVWPGMPYVWFASHWLAMSHSCYNPLIYCYMNAKY 217
           D DW+V  GM   W    WL+ S S +    +CY   K+
Sbjct: 400 DADWSVNAGM---WM---WLSCS-SFFQQFFHCYCPIKF 431


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)

Query: 132 PLTALVYTYGRIAHFV 147
           P T LV  +GR  HFV
Sbjct: 243 PDTILVNGFGRFKHFV 258


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.328    0.139    0.482 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,966
Number of Sequences: 317
Number of extensions: 1941
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 16
length of query: 251
length of database: 114,650
effective HSP length: 55
effective length of query: 196
effective length of database: 97,215
effective search space: 19054140
effective search space used: 19054140
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 42 (21.0 bits)