GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002457-TA|BGIBMGA002457-PA|IPR002086|Aldehyde
dehydrogenase, IPR012303|NAD-dependent aldehyde dehydrogenase
         (486 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    25   3.4  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   7.9  

>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 448 HQAPFGGFKDSGIGRENGIKAVEAYLEEKTVI 479
           H+ P G +   GIG  N I +  A +E K ++
Sbjct: 458 HKIPLGAYLPFGIGPRNCIASRFALMEVKAIV 489


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 7.9
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 259 KSPLIIMNDADLNLAIPYAGSGVFFHQGQICVAASRLYVQSGIYD 303
           K  +++ N+AD N  + Y  + + +  G++      +Y  S   D
Sbjct: 110 KPDIVLFNNADGNYEVRYKSNVLIYPNGEVLWVPPAIYQSSCTID 154


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.137    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,516
Number of Sequences: 2123
Number of extensions: 20275
Number of successful extensions: 80
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78
Number of HSP's gapped (non-prelim): 2
length of query: 486
length of database: 516,269
effective HSP length: 67
effective length of query: 419
effective length of database: 374,028
effective search space: 156717732
effective search space used: 156717732
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)