GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002457-TA|BGIBMGA002457-PA|IPR002086|Aldehyde
dehydrogenase, IPR012303|NAD-dependent aldehyde dehydrogenase
         (486 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    27   0.27 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    27   0.27 
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    24   2.5  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   4.3  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    23   4.3  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   4.3  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   4.3  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 0.27
 Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 389 GPVQSILKFDTLEEVIDRANNTNYGLAAGIFTTNLNNALQ-FSKHVEAGTVWVNNYLTMA 447
           G + +IL F   E+++D     N      +F  N N+ ++  S + +     +  ++ ++
Sbjct: 500 GSLYAILNFSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISNNEQVKVSALGFFILIS 559

Query: 448 HQAPFGGF 455
             A FG F
Sbjct: 560 QDAKFGNF 567


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 0.27
 Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 389 GPVQSILKFDTLEEVIDRANNTNYGLAAGIFTTNLNNALQ-FSKHVEAGTVWVNNYLTMA 447
           G + +IL F   E+++D     N      +F  N N+ ++  S + +     +  ++ ++
Sbjct: 500 GSLYAILNFSNEEQIVDLKAFNNVPKKLNMFYNNFNSDIKSISNNEQVKVSALGFFILIS 559

Query: 448 HQAPFGGF 455
             A FG F
Sbjct: 560 QDAKFGNF 567


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 8/27 (29%), Positives = 15/27 (55%)

Query: 262 LIIMNDADLNLAIPYAGSGVFFHQGQI 288
           +++ N+AD N  +  A     +HQG +
Sbjct: 115 IVLYNNADGNFEVTLATKATIYHQGLV 141


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 6   KYTKLFIDNEWVDAKDGETFDTFSP 30
           K+TK+ ID E   A+DG +    SP
Sbjct: 236 KFTKMTIDGESYTAQDGISGMALSP 260


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 13/65 (20%)

Query: 262 LIIMNDADLNLAIPYAGSGVFFHQGQICVAASRLYVQSGIYDKFVKGAVEYAKAIRVGNP 321
           +++ N+AD N  +      +  H G++      ++    IY  F +  VEY        P
Sbjct: 107 IVLYNNADGNYEVTIMTKAILHHTGKV------VWKPPAIYKSFCEIDVEYF-------P 153

Query: 322 FDEST 326
           FDE T
Sbjct: 154 FDEQT 158


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 6   KYTKLFIDNEWVDAKDGETFDTFSP 30
           K+TK+ ID E   A+DG +    SP
Sbjct: 236 KFTKMTIDGESYTAQDGISGMALSP 260


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 6   KYTKLFIDNEWVDAKDGETFDTFSP 30
           K+TK+ ID E   A+DG +    SP
Sbjct: 236 KFTKMTIDGESYTAQDGISGMALSP 260


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.137    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,625
Number of Sequences: 429
Number of extensions: 5656
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 7
length of query: 486
length of database: 140,377
effective HSP length: 60
effective length of query: 426
effective length of database: 114,637
effective search space: 48835362
effective search space used: 48835362
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)