GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002455-TA|BGIBMGA002455-PA|undefined
         (105 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    22   1.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   4.1  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    20   5.4  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    20   5.4  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    20   7.1  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    19   9.4  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    19   9.4  

>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced
          protein 75 protein.
          Length = 36

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 67 YHIATEPEHITGEWPYID 84
          YH+A  P H++   P +D
Sbjct: 5  YHVAQLPHHLSPNMPTMD 22


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 9/39 (23%), Positives = 15/39 (38%)

Query: 44  PMPSKKSIRLAQGLGGLCWWWILYHIATEPEHITGEWPY 82
           P+P    +    GL  L W W+ ++  +        W Y
Sbjct: 215 PLPLGCPVNAIMGLFVLWWGWLAFNSGSTYGVSGQRWQY 253


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 6/11 (54%), Positives = 7/11 (63%)

Query: 61  CWWWILYHIAT 71
           CWW I + I T
Sbjct: 489 CWWKICWTITT 499


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 6/11 (54%), Positives = 7/11 (63%)

Query: 61  CWWWILYHIAT 71
           CWW I + I T
Sbjct: 542 CWWKICWTITT 552


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
          protein MRJP6 protein.
          Length = 437

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 75 HITGEWPYIDPSTWTDEE 92
          ++  EW YID    +DE+
Sbjct: 36 NVIHEWKYIDYDFGSDEK 53


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
          protein 8 protein.
          Length = 416

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)

Query: 79 EWPYIDPSTWTDEE 92
          EW YID    +DE+
Sbjct: 34 EWKYIDYDFGSDEK 47


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/26 (38%), Positives = 11/26 (42%)

Query: 37  WTYRVPPPMPSKKSIRLAQGLGGLCW 62
           W    P   PSK S R A  L  + W
Sbjct: 146 WAITDPFTYPSKMSRRRAAVLIAIVW 171


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.138    0.500 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,710
Number of Sequences: 429
Number of extensions: 1410
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 105
length of database: 140,377
effective HSP length: 50
effective length of query: 55
effective length of database: 118,927
effective search space:  6540985
effective search space used:  6540985
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
S2: 38 (19.4 bits)