BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002454-TA|BGIBMGA002454-PA|undefined
(65 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT030264-1|ABN49403.1| 127|Drosophila melanogaster IP18385p pro... 60 4e-10
BT030244-1|ABN49383.1| 129|Drosophila melanogaster IP18285p pro... 60 4e-10
BT030243-1|ABN49382.1| 138|Drosophila melanogaster IP18284p pro... 60 4e-10
BT030212-1|ABN49351.1| 133|Drosophila melanogaster IP18085p pro... 60 4e-10
AE014297-3633|ABI31206.1| 128|Drosophila melanogaster CG34150-P... 37 0.003
U14395-1|AAA62876.1| 579|Drosophila melanogaster tyrosine hydro... 29 0.80
AY071698-1|AAL49320.1| 579|Drosophila melanogaster RH16704p pro... 29 0.80
AE014296-1147|AAF50648.1| 579|Drosophila melanogaster CG10118-P... 29 0.80
AY070588-1|AAL48059.1| 695|Drosophila melanogaster RE69013p pro... 27 4.3
AF252386-1|AAF99658.1| 701|Drosophila melanogaster Maverick pro... 27 4.3
AE014135-110|AAX52509.1| 433|Drosophila melanogaster CG1901-PB,... 27 4.3
AE014135-109|AAF59328.1| 701|Drosophila melanogaster CG1901-PA,... 27 4.3
>BT030264-1|ABN49403.1| 127|Drosophila melanogaster IP18385p
protein.
Length = 127
Score = 60.1 bits (139), Expect = 4e-10
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 1 MIAFGEDIERELRTQVIQAREIKPGVYEARITDDTVKLDNIPFNDHAILE 50
MI +D++ ELRT VIQA++ + GVYE RIT +T +LDN+ FN AI+E
Sbjct: 46 MIKLAQDVDLELRTNVIQAQKKEDGVYELRITPETTRLDNVVFNPDAIIE 95
>BT030244-1|ABN49383.1| 129|Drosophila melanogaster IP18285p
protein.
Length = 129
Score = 60.1 bits (139), Expect = 4e-10
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 1 MIAFGEDIERELRTQVIQAREIKPGVYEARITDDTVKLDNIPFNDHAILE 50
MI +D++ ELRT VIQA++ + GVYE RIT +T +LDN+ FN AI+E
Sbjct: 48 MIKLAQDVDLELRTNVIQAQKKEDGVYELRITPETTRLDNVVFNPDAIIE 97
>BT030243-1|ABN49382.1| 138|Drosophila melanogaster IP18284p
protein.
Length = 138
Score = 60.1 bits (139), Expect = 4e-10
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 1 MIAFGEDIERELRTQVIQAREIKPGVYEARITDDTVKLDNIPFNDHAILE 50
MI +D++ ELRT VIQA++ + GVYE RIT +T +LDN+ FN AI+E
Sbjct: 57 MIKLAQDVDLELRTNVIQAQKKEDGVYELRITPETTRLDNVVFNPDAIIE 106
>BT030212-1|ABN49351.1| 133|Drosophila melanogaster IP18085p
protein.
Length = 133
Score = 60.1 bits (139), Expect = 4e-10
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 1 MIAFGEDIERELRTQVIQAREIKPGVYEARITDDTVKLDNIPFNDHAILE 50
MI +D++ ELRT VIQA++ + GVYE RIT +T +LDN+ FN AI+E
Sbjct: 52 MIKLAQDVDLELRTNVIQAQKKEDGVYELRITPETTRLDNVVFNPDAIIE 101
>AE014297-3633|ABI31206.1| 128|Drosophila melanogaster CG34150-PA
protein.
Length = 128
Score = 37.1 bits (82), Expect = 0.003
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 9/50 (18%)
Query: 1 MIAFGEDIERELRTQVIQAREIKPGVYEARITDDTVKLDNIPFNDHAILE 50
MI +D++ ELRT VIQA++ + D T +LDN+ FN AI+E
Sbjct: 56 MIKLAQDVDLELRTNVIQAQKKE---------DGTTRLDNVVFNPDAIIE 96
>U14395-1|AAA62876.1| 579|Drosophila melanogaster tyrosine
hydroxylase type 2, hypodermalform protein.
Length = 579
Score = 29.1 bits (62), Expect = 0.80
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 16 VIQAREIKPGVYEARITDDTVKLDNIPFNDHAILEDGTE 54
++QA+E P + + D+ L+N+P ++ +E+ E
Sbjct: 68 IVQAQEHIPSEQDVELQDEHANLENLPLEEYVPVEEDVE 106
>AY071698-1|AAL49320.1| 579|Drosophila melanogaster RH16704p
protein.
Length = 579
Score = 29.1 bits (62), Expect = 0.80
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 16 VIQAREIKPGVYEARITDDTVKLDNIPFNDHAILEDGTE 54
++QA+E P + + D+ L+N+P ++ +E+ E
Sbjct: 68 IVQAQEHIPSEQDVELQDEHANLENLPLEEYVPVEEDVE 106
>AE014296-1147|AAF50648.1| 579|Drosophila melanogaster CG10118-PB,
isoform B protein.
Length = 579
Score = 29.1 bits (62), Expect = 0.80
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 16 VIQAREIKPGVYEARITDDTVKLDNIPFNDHAILEDGTE 54
++QA+E P + + D+ L+N+P ++ +E+ E
Sbjct: 68 IVQAQEHIPSEQDVELQDEHANLENLPLEEYVPVEEDVE 106
>AY070588-1|AAL48059.1| 695|Drosophila melanogaster RE69013p
protein.
Length = 695
Score = 26.6 bits (56), Expect = 4.3
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 22 IKPGVYEARITDDTVKLDNIPFNDHAIL------EDGTEAPRPCC 60
++P V++A + P + HA+L ED APRPCC
Sbjct: 620 LQPKVFDAGYCHGRCPPRHNPAHHHALLQSLIWQEDHKRAPRPCC 664
>AF252386-1|AAF99658.1| 701|Drosophila melanogaster Maverick
protein.
Length = 701
Score = 26.6 bits (56), Expect = 4.3
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 22 IKPGVYEARITDDTVKLDNIPFNDHAIL------EDGTEAPRPCC 60
++P V++A + P + HA+L ED APRPCC
Sbjct: 620 LQPKVFDAGYCHGRCPPRHNPAHHHALLQSLIWQEDHKRAPRPCC 664
>AE014135-110|AAX52509.1| 433|Drosophila melanogaster CG1901-PB,
isoform B protein.
Length = 433
Score = 26.6 bits (56), Expect = 4.3
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 22 IKPGVYEARITDDTVKLDNIPFNDHAIL------EDGTEAPRPCC 60
++P V++A + P + HA+L ED APRPCC
Sbjct: 352 LQPKVFDAGYCHGRCPPRHNPAHHHALLQSLIWQEDHKRAPRPCC 396
>AE014135-109|AAF59328.1| 701|Drosophila melanogaster CG1901-PA,
isoform A protein.
Length = 701
Score = 26.6 bits (56), Expect = 4.3
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Query: 22 IKPGVYEARITDDTVKLDNIPFNDHAIL------EDGTEAPRPCC 60
++P V++A + P + HA+L ED APRPCC
Sbjct: 620 LQPKVFDAGYCHGRCPPRHNPAHHHALLQSLIWQEDHKRAPRPCC 664
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.318 0.138 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,254,008
Number of Sequences: 52641
Number of extensions: 103868
Number of successful extensions: 168
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 159
Number of HSP's gapped (non-prelim): 12
length of query: 65
length of database: 24,830,863
effective HSP length: 45
effective length of query: 20
effective length of database: 22,462,018
effective search space: 449240360
effective search space used: 449240360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
- SilkBase 1999-2023 -