GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002454-TA|BGIBMGA002454-PA|undefined
         (65 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   1.6  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              19   3.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    18   8.5  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 1.6
 Identities = 8/25 (32%), Positives = 15/25 (60%)

Query: 4   FGEDIERELRTQVIQAREIKPGVYE 28
           F ++ +   R  +I  ++I+PG YE
Sbjct: 530 FDKNGDGPARYNIIHFKQIEPGKYE 554


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 3.7
 Identities = 9/32 (28%), Positives = 13/32 (40%)

Query: 4   FGEDIERELRTQVIQAREIKPGVYEARITDDT 35
           F E + RE+    +   EI   + E     DT
Sbjct: 79  FNEHVSREIAKIFLNENEINQLITECSAISDT 110


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
          beta-synthase protein.
          Length = 504

 Score = 18.2 bits (35), Expect = 8.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 13 RTQVIQAREIKPGVYEARITDDTVKLDNIP 42
          RT+     +I P +  A      +KL+NIP
Sbjct: 26 RTKNGDYTKIMPDILTAIGQTPLIKLNNIP 55


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.138    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,064
Number of Sequences: 429
Number of extensions: 520
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 65
length of database: 140,377
effective HSP length: 44
effective length of query: 21
effective length of database: 121,501
effective search space:  2551521
effective search space used:  2551521
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
S2: 35 (18.2 bits)