Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002453-TA|BGIBMGA002453-PA|undefined
(62 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98882-1|CAI95591.1| 756|Homo sapiens RAB11 family interacting ... 27 6.9
BC051360-1|AAH51360.1| 756|Homo sapiens RAB11 family interactin... 27 6.9
AY130007-1|AAN05091.1| 225|Homo sapiens MU-MB-17.148 protein. 27 6.9
AL049542-2|CAI95788.1| 756|Homo sapiens RAB11 family interactin... 27 6.9
AL023881-3|CAI95593.1| 756|Homo sapiens RAB11 family interactin... 27 6.9
AF395731-1|AAL12940.1| 756|Homo sapiens eferin protein. 27 6.9
AE006463-12|AAK61232.1| 756|Homo sapiens unknown function protein. 27 6.9
AB014565-1|BAA31640.2| 760|Homo sapiens KIAA0665 protein protein. 27 6.9
U57627-1|AAB03839.2| 901|Homo sapiens ocrl1 protein. 27 9.2
M88162-1|AAA59964.2| 968|Homo sapiens Lowe oculocerebrorenal sy... 27 9.2
BC130612-1|AAI30613.1| 893|Homo sapiens oculocerebrorenal syndr... 27 9.2
BC094726-1|AAH94726.1| 893|Homo sapiens oculocerebrorenal syndr... 27 9.2
AL662877-2|CAI41087.1| 893|Homo sapiens oculocerebrorenal syndr... 27 9.2
AL662877-1|CAI41088.1| 901|Homo sapiens oculocerebrorenal syndr... 27 9.2
AL138745-5|CAI42616.1| 901|Homo sapiens oculocerebrorenal syndr... 27 9.2
AL138745-4|CAI42615.1| 893|Homo sapiens oculocerebrorenal syndr... 27 9.2
AL022162-2|CAI95696.1| 893|Homo sapiens oculocerebrorenal syndr... 27 9.2
AL022162-1|CAI95695.1| 901|Homo sapiens oculocerebrorenal syndr... 27 9.2
>Z98882-1|CAI95591.1| 756|Homo sapiens RAB11 family interacting
protein 3 (class II) protein.
Length = 756
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/23 (52%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Query: 38 QHDREAIQKLIQDMRKKQMQSLE 60
Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 612 QRDKEATQELIEDLR-KQLEHLQ 633
>BC051360-1|AAH51360.1| 756|Homo sapiens RAB11 family interacting
protein 3 (class II) protein.
Length = 756
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/23 (52%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Query: 38 QHDREAIQKLIQDMRKKQMQSLE 60
Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 612 QRDKEATQELIEDLR-KQLEHLQ 633
>AY130007-1|AAN05091.1| 225|Homo sapiens MU-MB-17.148 protein.
Length = 225
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/23 (52%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Query: 38 QHDREAIQKLIQDMRKKQMQSLE 60
Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 81 QRDKEATQELIEDLR-KQLEHLQ 102
>AL049542-2|CAI95788.1| 756|Homo sapiens RAB11 family interacting
protein 3 (class II) protein.
Length = 756
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/23 (52%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Query: 38 QHDREAIQKLIQDMRKKQMQSLE 60
Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 612 QRDKEATQELIEDLR-KQLEHLQ 633
>AL023881-3|CAI95593.1| 756|Homo sapiens RAB11 family interacting
protein 3 (class II) protein.
Length = 756
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/23 (52%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Query: 38 QHDREAIQKLIQDMRKKQMQSLE 60
Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 612 QRDKEATQELIEDLR-KQLEHLQ 633
>AF395731-1|AAL12940.1| 756|Homo sapiens eferin protein.
Length = 756
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/23 (52%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Query: 38 QHDREAIQKLIQDMRKKQMQSLE 60
Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 612 QRDKEATQELIEDLR-KQLEHLQ 633
>AE006463-12|AAK61232.1| 756|Homo sapiens unknown function protein.
Length = 756
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/23 (52%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Query: 38 QHDREAIQKLIQDMRKKQMQSLE 60
Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 612 QRDKEATQELIEDLR-KQLEHLQ 633
>AB014565-1|BAA31640.2| 760|Homo sapiens KIAA0665 protein protein.
Length = 760
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/23 (52%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Query: 38 QHDREAIQKLIQDMRKKQMQSLE 60
Q D+EA Q+LI+D+R KQ++ L+
Sbjct: 616 QRDKEATQELIEDLR-KQLEHLQ 637
>U57627-1|AAB03839.2| 901|Homo sapiens ocrl1 protein.
Length = 901
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 25 VTNTKRQIFPPENQH-DREAIQKLIQDMRKKQMQSLES 61
VTNT R++F P Q RE + K I R+K+ ++++
Sbjct: 202 VTNTMRKLFVPNTQSGQREGLIKHILAKREKEYVNIQT 239
>M88162-1|AAA59964.2| 968|Homo sapiens Lowe oculocerebrorenal
syndrome protein protein.
Length = 968
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 25 VTNTKRQIFPPENQH-DREAIQKLIQDMRKKQMQSLES 61
VTNT R++F P Q RE + K I R+K+ ++++
Sbjct: 277 VTNTMRKLFVPNTQSGQREGLIKHILAKREKEYVNIQT 314
>BC130612-1|AAI30613.1| 893|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 893
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 25 VTNTKRQIFPPENQH-DREAIQKLIQDMRKKQMQSLES 61
VTNT R++F P Q RE + K I R+K+ ++++
Sbjct: 202 VTNTMRKLFVPNTQSGQREGLIKHILAKREKEYVNIQT 239
>BC094726-1|AAH94726.1| 893|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 893
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 25 VTNTKRQIFPPENQH-DREAIQKLIQDMRKKQMQSLES 61
VTNT R++F P Q RE + K I R+K+ ++++
Sbjct: 202 VTNTMRKLFVPNTQSGQREGLIKHILAKREKEYVNIQT 239
>AL662877-2|CAI41087.1| 893|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 893
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 25 VTNTKRQIFPPENQH-DREAIQKLIQDMRKKQMQSLES 61
VTNT R++F P Q RE + K I R+K+ ++++
Sbjct: 202 VTNTMRKLFVPNTQSGQREGLIKHILAKREKEYVNIQT 239
>AL662877-1|CAI41088.1| 901|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 901
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 25 VTNTKRQIFPPENQH-DREAIQKLIQDMRKKQMQSLES 61
VTNT R++F P Q RE + K I R+K+ ++++
Sbjct: 202 VTNTMRKLFVPNTQSGQREGLIKHILAKREKEYVNIQT 239
>AL138745-5|CAI42616.1| 901|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 901
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 25 VTNTKRQIFPPENQH-DREAIQKLIQDMRKKQMQSLES 61
VTNT R++F P Q RE + K I R+K+ ++++
Sbjct: 202 VTNTMRKLFVPNTQSGQREGLIKHILAKREKEYVNIQT 239
>AL138745-4|CAI42615.1| 893|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 893
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 25 VTNTKRQIFPPENQH-DREAIQKLIQDMRKKQMQSLES 61
VTNT R++F P Q RE + K I R+K+ ++++
Sbjct: 202 VTNTMRKLFVPNTQSGQREGLIKHILAKREKEYVNIQT 239
>AL022162-2|CAI95696.1| 893|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 893
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 25 VTNTKRQIFPPENQH-DREAIQKLIQDMRKKQMQSLES 61
VTNT R++F P Q RE + K I R+K+ ++++
Sbjct: 202 VTNTMRKLFVPNTQSGQREGLIKHILAKREKEYVNIQT 239
>AL022162-1|CAI95695.1| 901|Homo sapiens oculocerebrorenal syndrome
of Lowe protein.
Length = 901
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 25 VTNTKRQIFPPENQH-DREAIQKLIQDMRKKQMQSLES 61
VTNT R++F P Q RE + K I R+K+ ++++
Sbjct: 202 VTNTMRKLFVPNTQSGQREGLIKHILAKREKEYVNIQT 239
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.323 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,426,633
Number of Sequences: 224733
Number of extensions: 280920
Number of successful extensions: 1140
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1140
Number of HSP's gapped (non-prelim): 18
length of query: 62
length of database: 73,234,838
effective HSP length: 42
effective length of query: 20
effective length of database: 63,796,052
effective search space: 1275921040
effective search space used: 1275921040
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 57 (27.1 bits)
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