GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002452-TA|BGIBMGA002452-PA|undefined
         (91 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   0.90 
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   0.90 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   0.90 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   0.90 
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   1.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   3.6  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    19   8.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    19   8.4  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu
          protein.
          Length = 322

 Score = 22.2 bits (45), Expect = 0.90
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 39 TKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAIP 76
          T   E+ H+ K+ EP  +    + +  Y  HF  S  P
Sbjct: 40 THNNEMYHRVKE-EPIYESCRFSINQPYLNHFDNSVTP 76


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
          transcription factor Fushitarazu protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 0.90
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 39 TKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAIP 76
          T   E+ H+ K+ EP  +    + +  Y  HF  S  P
Sbjct: 40 THNNEMYHRVKE-EPIYESCRFSINQPYLNHFDNSVTP 76


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 0.90
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 2   FQKITQNLLKIIN--DLWM--SQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPF 54
           F++I Q+  + I   DL++    T      N K+ E+T    K  E+ H H K   F
Sbjct: 214 FEQINQHFRRQIKSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHYKLANF 270


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 0.90
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)

Query: 2   FQKITQNLLKIIN--DLWM--SQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPF 54
           F++I Q+  + I   DL++    T      N K+ E+T    K  E+ H H K   F
Sbjct: 170 FEQINQHFRRQIKSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHYKLANF 226


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 1.6
 Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 39 TKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAIP 76
          T   E+ H  K+ EP  +    + +  Y  HF  S  P
Sbjct: 40 THNNEMYHSVKE-EPIYESCRFSINQPYLNHFDNSVTP 76


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 3.6
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query: 56  DELHMNTHNMYETHFGGSAIPSSILQKTIVLPKQP 90
           D    NT+N +    GG  + S I + +   P  P
Sbjct: 505 DIFRPNTYNRFLAATGGDHVISLIDEISFTFPPSP 539


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock
          protein 70 protein.
          Length = 195

 Score = 19.0 bits (37), Expect = 8.4
 Identities = 7/23 (30%), Positives = 11/23 (47%)

Query: 67 ETHFGGSAIPSSILQKTIVLPKQ 89
          +TH GG      ++   I + KQ
Sbjct: 52 DTHLGGEDFDQKVMDYFIKMVKQ 74


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory
          receptor candidate 22 protein.
          Length = 301

 Score = 19.0 bits (37), Expect = 8.4
 Identities = 6/12 (50%), Positives = 11/12 (91%)

Query: 75 IPSSILQKTIVL 86
          IP+S++QK ++L
Sbjct: 48 IPNSVVQKHLIL 59


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.131    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,440
Number of Sequences: 317
Number of extensions: 895
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 91
length of database: 114,650
effective HSP length: 47
effective length of query: 44
effective length of database: 99,751
effective search space:  4389044
effective search space used:  4389044
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.8 bits)
S2: 37 (19.0 bits)