Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002452-TA|BGIBMGA002452-PA|undefined
(91 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 33 0.007
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 29 0.11
SPBC2G2.16 |||mannose-6-phosphate isomerase |Schizosaccharomyces... 27 0.34
SPCC74.01 |sly1||SNARE binding protein Sly1|Schizosaccharomyces ... 26 0.78
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 26 1.0
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 25 1.4
SPCC1259.10 |pgp1||metallopeptidase Pgp1|Schizosaccharomyces pom... 25 2.4
SPBC4B4.01c |||fumble family pantothenate kinase |Schizosaccharo... 24 3.1
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 24 3.1
SPBC19F8.04c |||nuclease|Schizosaccharomyces pombe|chr 2|||Manual 24 4.1
SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr 2|||M... 23 5.5
SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyce... 23 5.5
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 23 5.5
SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 23 5.5
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 23 7.2
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 23 7.2
SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|... 23 7.2
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 23 9.6
SPCC4G3.10c |rhp42|rhp4b|DNA repair protein Rhp42|Schizosaccharo... 23 9.6
SPBC1703.03c |||armadillo repeat protein, unknown biological rol... 23 9.6
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 23 9.6
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 23 9.6
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 33.1 bits (72), Expect = 0.007
Identities = 19/81 (23%), Positives = 40/81 (49%)
Query: 7 QNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMY 66
+ L KI++ L +I++ L+ +++T + + K D L++ + +
Sbjct: 313 ETLTKILSYLESQSSIIKKDLSIPSRKVTMLCSATMKDTVKRLSDSALKDALYLKSSIVE 372
Query: 67 ETHFGGSAIPSSILQKTIVLP 87
ET+ G S P +LQ+ +V+P
Sbjct: 373 ETNDGYSQAPEQLLQRYVVVP 393
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 29.1 bits (62), Expect = 0.11
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 40 KFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAIPSSILQKTIVLP 87
KF + K + H NT N++ET G + S++ + LP
Sbjct: 399 KFHRVDPKRRVLLAERSAKHQNTDNLFETPDEGDGLSSAVFNFNVALP 446
>SPBC2G2.16 |||mannose-6-phosphate isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 27.5 bits (58), Expect = 0.34
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 5/63 (7%)
Query: 30 KDKELTAYKTKFGEIQHK-HKKTEPFNDEL----HMNTHNMYETHFGGSAIPSSILQKTI 84
K E A +T F E+ HK K+ + F +L + +N T +GG A I+
Sbjct: 173 KQDERKALETLFNELMHKDEKRIQEFTPQLVQLAKSDANNFGGTEYGGKAFSDLIIHLNS 232
Query: 85 VLP 87
P
Sbjct: 233 QFP 235
>SPCC74.01 |sly1||SNARE binding protein Sly1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 639
Score = 26.2 bits (55), Expect = 0.78
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 6 TQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEI 44
T +L+ +IN W Q ++ +TLN + +T G++
Sbjct: 256 TVDLIPMINHSWTYQALIHDTLNMQLNRITVESVDDGKM 294
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 25.8 bits (54), Expect = 1.0
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 19 SQTILRNTLNKK-DKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETH 69
S L++ N+ D L K +F E + HK +EP +D+ N+ + + H
Sbjct: 537 SSNALKSDANENTDSSLPPSKKEFIE-KSLHKLSEPLHDDSRQNSDHNFAPH 587
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.4 bits (53), Expect = 1.4
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 17 WMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTE 52
W S+ + R+ KD+ T YK K GE H H E
Sbjct: 1832 WFSKLLRRD--ESKDQP-TVYKAKLGEKSHLHYDKE 1864
>SPCC1259.10 |pgp1||metallopeptidase Pgp1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 412
Score = 24.6 bits (51), Expect = 2.4
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 22 ILRNT-LNKKDKELTAYKTKFGEIQHKHKKT 51
I+R T LN +K+ AY+ ++ QH +KT
Sbjct: 275 IIRKTPLNLSEKKFFAYQLQYAAFQHICQKT 305
>SPBC4B4.01c |||fumble family pantothenate kinase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 24.2 bits (50), Expect = 3.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 58 LHMNTHNMYETHFGGSAIPSSI 79
LH HN+ +FGGS I + +
Sbjct: 330 LHAQKHNVQNIYFGGSFIRNHV 351
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 24.2 bits (50), Expect = 3.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 31 DKELTAYKTKFGEIQHKHKK 50
D +LT + GEIQ HKK
Sbjct: 79 DDDLTEFYKSLGEIQEFHKK 98
>SPBC19F8.04c |||nuclease|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 23.8 bits (49), Expect = 4.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 19 SQTILRNTLNKKDKELTAYKTKFGEI 44
+ TI +N LN E YKT FG +
Sbjct: 36 ASTIPKNYLNNSTVENRKYKTMFGYV 61
>SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr
2|||Manual
Length = 307
Score = 23.4 bits (48), Expect = 5.5
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Query: 17 WMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHM 60
W+S RNTLNK + L + ++ E+ + K N E+ +
Sbjct: 103 WLSSK--RNTLNKSKESLQKDEAEYVELANSLKTKVETNIEIRI 144
>SPBC1703.11 |||optic atrophy 3 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 218
Score = 23.4 bits (48), Expect = 5.5
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Query: 13 INDLWMSQTIL---RNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETH 69
IN++ Q +L +N L +E+ + + F E+ HK ELH N +
Sbjct: 128 INEIMEKQFVLQKKKNELQSSTEEIDSTEKDFDEL---HKVILKVERELHTLRQNTPSQN 184
Query: 70 FGGSAIPSSILQKTIVLPK 88
A PS + + V K
Sbjct: 185 EQAEATPSKEIPRETVSEK 203
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 23.4 bits (48), Expect = 5.5
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 23 LRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDEL 58
L +NK ++ K K E+ K PF +EL
Sbjct: 878 LEKDINKSSEDCDLQKKKLLEVSSKQGSQAPFLNEL 913
>SPAC16E8.13 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 547
Score = 23.4 bits (48), Expect = 5.5
Identities = 10/44 (22%), Positives = 22/44 (50%)
Query: 15 DLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDEL 58
DL I + L K+D +L ++ ++H +++ + N+ L
Sbjct: 410 DLRSRVDISESKLKKRDDKLKRVSSQLEHLKHNYEEEKSMNENL 453
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 23.0 bits (47), Expect = 7.2
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 38 KTKFGEIQHKHKKTEPFNDELHMNTHNMYE 67
K KF E++ P ++E+H T +++
Sbjct: 501 KRKFSEVETLLSSLAPLHEEIHSITEKIHD 530
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 23.0 bits (47), Expect = 7.2
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 35 TAYKTKFGEIQHKHKKTEPFNDELH 59
T Y+ FG + + P N++LH
Sbjct: 1017 TKYRNHFGNLMTSEETKAPDNNDLH 1041
>SPAC1006.03c |||human CCDC131 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 714
Score = 23.0 bits (47), Expect = 7.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 22 ILRNTLNKKDKELTAYKT 39
IL N + K++ ELT Y+T
Sbjct: 480 ILNNLIEKEEGELTKYQT 497
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1389
Score = 22.6 bits (46), Expect = 9.6
Identities = 9/47 (19%), Positives = 22/47 (46%)
Query: 6 TQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTE 52
T++ + D+W + ++ L + + AY K ++H + T+
Sbjct: 1049 TEDFVTTDGDIWSATYAIKRYLGENPTDTFAYYIKASLLEHLGETTD 1095
>SPCC4G3.10c |rhp42|rhp4b|DNA repair protein
Rhp42|Schizosaccharomyces pombe|chr 3|||Manual
Length = 686
Score = 22.6 bits (46), Expect = 9.6
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 31 DKELTAYKTKFGEIQHKHKKTEPFNDELHMNT 62
DK YK FG++ ++K E +E + +
Sbjct: 407 DKYFDFYKAIFGQLAKRNKDAEDIYEEKELES 438
>SPBC1703.03c |||armadillo repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 664
Score = 22.6 bits (46), Expect = 9.6
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 1 MFQKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTK 40
+F L I++DL S+ RN + + + T +KTK
Sbjct: 284 LFDSFIPEALPILSDLLPSEENYRNLVRQVYDKDTYFKTK 323
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 22.6 bits (46), Expect = 9.6
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 2 FQKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHK 47
FQ+ + L++ ++LW S LR TL L +++KF +K
Sbjct: 527 FQEYVE-LVEWSDNLWSSTDYLRATLGALTIYLLLFESKFNMYGNK 571
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 22.6 bits (46), Expect = 9.6
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 22 ILRNTLNKKDKELTAYKTK 40
IL+N LN+++ E+T K K
Sbjct: 276 ILKNVLNERENEVTDKKGK 294
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.131 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,133
Number of Sequences: 5004
Number of extensions: 17293
Number of successful extensions: 64
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 46
Number of HSP's gapped (non-prelim): 24
length of query: 91
length of database: 2,362,478
effective HSP length: 61
effective length of query: 30
effective length of database: 2,057,234
effective search space: 61717020
effective search space used: 61717020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)
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