GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002452-TA|BGIBMGA002452-PA|undefined
         (91 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          23   1.7  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   2.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   4.0  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   4.0  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    21   7.0  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    21   7.0  

>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 23 LRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHN 64
          L+  + K+ K+L   K   GE   K+ K +   DE  +  +N
Sbjct: 36 LKGEVEKQSKKLEKRKETLGESLDKNHKKKIERDEEKLKNNN 77


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 55   NDELHMNTHNMYETHFGGSAIP 76
            +  LH + H+ +  H GG  +P
Sbjct: 1311 SSHLHHHLHHGHHHHHGGEGVP 1332


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/23 (34%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 48   HKKTEPFNDELHMNTHNMYETHF 70
            H+ T P  +++H NT   Y++H+
Sbjct: 3090 HENT-PEGEQVHDNTIQRYKSHY 3111



 Score = 21.4 bits (43), Expect = 5.3
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 33  ELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSA 74
           E  +  T +  I      T  +ND LH +T  +    F  +A
Sbjct: 218 EFPSKDTDYDRIMFAKFGTTSYNDLLHFSTEGLMIYRFNDTA 259


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/45 (20%), Positives = 21/45 (46%)

Query: 1    MFQKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQ 45
            +F K+     K+I+++ ++  ++   L KK +    Y     + Q
Sbjct: 2951 IFDKLPSAASKVIDEIIITDNLVLTILKKKHRRSVKYSNLTSDSQ 2995


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 61  NTHNMYETHFGGSAIPSSILQKTIVLPKQPM 91
           NT+N +    GG  + S I + + V P  PM
Sbjct: 552 NTYNKFLVAPGGDHLISLIDEISYVSPPSPM 582


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/24 (29%), Positives = 15/24 (62%)

Query: 38  KTKFGEIQHKHKKTEPFNDELHMN 61
           K+  G++Q  H++ +    E+H+N
Sbjct: 196 KSADGDVQKAHQRIDEDRLEIHVN 219


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.131    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,640
Number of Sequences: 2123
Number of extensions: 3336
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 91
length of database: 516,269
effective HSP length: 54
effective length of query: 37
effective length of database: 401,627
effective search space: 14860199
effective search space used: 14860199
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 41 (20.6 bits)