GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002452-TA|BGIBMGA002452-PA|undefined
         (91 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY639646-1|AAX19141.1|  572|Homo sapiens prefoldin subunit 6-lik...    28   4.0  
AL445669-8|CAH70752.1|  783|Homo sapiens novel protein protein.        28   4.0  
AL138788-1|CAI22439.1|  783|Homo sapiens novel protein protein.        28   4.0  
AY835704-1|AAV97944.1|  686|Homo sapiens ZNF569 protein.               28   5.2  
BT007259-1|AAP35923.1|  665|Homo sapiens kinesin-like 4 protein.       27   9.1  
BC112350-1|AAI12351.1|  955|Homo sapiens THRAP3 protein protein.       27   9.1  
BC112330-1|AAI12331.1|  955|Homo sapiens thyroid hormone recepto...    27   9.1  
BC037554-1|AAH37554.1|  672|Homo sapiens THRAP3 protein protein.       27   9.1  
BC028682-1|AAH28682.1|  411|Homo sapiens CCDC91 protein protein.       27   9.1  
BC028155-1|AAH28155.1|  665|Homo sapiens kinesin family member 2...    27   9.1  
BC018679-1|AAH18679.1|  370|Homo sapiens Unknown (protein for IM...    27   9.1  
BC004352-1|AAH04352.1|  665|Homo sapiens kinesin family member 2...    27   9.1  
AY289196-1|AAP42284.1|  441|Homo sapiens p56 protein.                  27   9.1  
AL591845-1|CAH71859.1|  955|Homo sapiens thyroid hormone recepto...    27   9.1  
AK223431-1|BAD97151.1|  665|Homo sapiens kinesin family member 2...    27   9.1  
AF117756-1|AAD22034.1|  955|Homo sapiens thyroid hormone recepto...    27   9.1  
AB017430-1|BAA33019.2|  665|Homo sapiens kinesin-like DNA bindin...    27   9.1  

>AY639646-1|AAX19141.1|  572|Homo sapiens prefoldin subunit 6-like
           protein protein.
          Length = 572

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 10/36 (27%), Positives = 21/36 (58%)

Query: 23  LRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDEL 58
           L N +  +DK +  ++ + G +QHK +K +   D++
Sbjct: 308 LTNEVELRDKRINQFEDEIGILQHKIEKEKAIQDQI 343


>AL445669-8|CAH70752.1|  783|Homo sapiens novel protein protein.
          Length = 783

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 10/36 (27%), Positives = 21/36 (58%)

Query: 23  LRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDEL 58
           L N +  +DK +  ++ + G +QHK +K +   D++
Sbjct: 519 LTNEVELRDKRINQFEDEIGILQHKIEKEKAIQDQI 554


>AL138788-1|CAI22439.1|  783|Homo sapiens novel protein protein.
          Length = 783

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 10/36 (27%), Positives = 21/36 (58%)

Query: 23  LRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDEL 58
           L N +  +DK +  ++ + G +QHK +K +   D++
Sbjct: 519 LTNEVELRDKRINQFEDEIGILQHKIEKEKAIQDQI 554


>AY835704-1|AAV97944.1|  686|Homo sapiens ZNF569 protein.
          Length = 686

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 22  ILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAI 75
           +LR    K  K LT  + K  E Q K     P N +   + HN+YE    G  +
Sbjct: 95  LLRQVEVKFQKTLT--EEKGNECQKKFANVFPLNSDFFPSRHNLYEYDLFGKCL 146


>BT007259-1|AAP35923.1|  665|Homo sapiens kinesin-like 4 protein.
          Length = 665

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 22  ILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAIPSSILQ 81
           +L  T+ +KD E+   KTK  E++ K    +    E H  T     +H   +   +  L+
Sbjct: 470 VLMKTVEEKDLEIERLKTKQKELEAKMLAQKAEEKENHCPTMLRPLSH--RTVTGAKPLK 527

Query: 82  KTIVLPKQ 89
           K +V+P Q
Sbjct: 528 KAVVMPLQ 535


>BC112350-1|AAI12351.1|  955|Homo sapiens THRAP3 protein protein.
          Length = 955

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 28  NKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAI 75
           NKK++E  +        Q +   +E F   +    H++ E HFG S +
Sbjct: 601 NKKEQEFRSIFQHIQSAQSQRSPSELFAQHIVTIVHHVKEHHFGSSGM 648


>BC112330-1|AAI12331.1|  955|Homo sapiens thyroid hormone receptor
           associated protein 3 protein.
          Length = 955

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 28  NKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAI 75
           NKK++E  +        Q +   +E F   +    H++ E HFG S +
Sbjct: 601 NKKEQEFRSIFQHIQSAQSQRSPSELFAQHIVTIVHHVKEHHFGSSGM 648


>BC037554-1|AAH37554.1|  672|Homo sapiens THRAP3 protein protein.
          Length = 672

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 28  NKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAI 75
           NKK++E  +        Q +   +E F   +    H++ E HFG S +
Sbjct: 601 NKKEQEFRSIFQHIQSAQSQRSPSELFAQHIVTIVHHVKEHHFGSSGM 648


>BC028682-1|AAH28682.1|  411|Homo sapiens CCDC91 protein protein.
          Length = 411

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/45 (24%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 7   QNLLKIINDLWMSQTIL-RNTLNKKDKELTAYKTKFGEIQHKHKK 50
           Q + + +  L     +L +  L +K++E  +++ ++ E+Q KHK+
Sbjct: 123 QRIKQDVESLMEKHNVLEKGFLKEKEQEAISFQDRYKELQEKHKQ 167


>BC028155-1|AAH28155.1|  665|Homo sapiens kinesin family member 22
           protein.
          Length = 665

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 22  ILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAIPSSILQ 81
           +L  T+ +KD E+   KTK  E++ K    +    E H  T     +H   +   +  L+
Sbjct: 470 VLMKTVEEKDLEIERLKTKQKELEAKMLAQKAEEKENHCPTMLRPLSH--RTVTGAKPLK 527

Query: 82  KTIVLPKQ 89
           K +V+P Q
Sbjct: 528 KAVVMPLQ 535


>BC018679-1|AAH18679.1|  370|Homo sapiens Unknown (protein for
           IMAGE:4663649) protein.
          Length = 370

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/45 (24%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 7   QNLLKIINDLWMSQTIL-RNTLNKKDKELTAYKTKFGEIQHKHKK 50
           Q + + +  L     +L +  L +K++E  +++ ++ E+Q KHK+
Sbjct: 153 QRIKQDVESLMEKHNVLEKGFLKEKEQEAISFQDRYKELQEKHKQ 197


>BC004352-1|AAH04352.1|  665|Homo sapiens kinesin family member 22
           protein.
          Length = 665

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 22  ILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAIPSSILQ 81
           +L  T+ +KD E+   KTK  E++ K    +    E H  T     +H   +   +  L+
Sbjct: 470 VLMKTVEEKDLEIERLKTKQKELEAKMLAQKAEEKENHCPTMLRPLSH--RTVTGAKPLK 527

Query: 82  KTIVLPKQ 89
           K +V+P Q
Sbjct: 528 KAVVMPLQ 535


>AY289196-1|AAP42284.1|  441|Homo sapiens p56 protein.
          Length = 441

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 11/45 (24%), Positives = 26/45 (57%), Gaps = 1/45 (2%)

Query: 7   QNLLKIINDLWMSQTIL-RNTLNKKDKELTAYKTKFGEIQHKHKK 50
           Q + + +  L     +L +  L +K++E  +++ ++ E+Q KHK+
Sbjct: 153 QRIKQDVESLMEKHNVLEKGFLKEKEQEAISFQDRYKELQEKHKQ 197


>AL591845-1|CAH71859.1|  955|Homo sapiens thyroid hormone receptor
           associated protein 3 protein.
          Length = 955

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 28  NKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAI 75
           NKK++E  +        Q +   +E F   +    H++ E HFG S +
Sbjct: 601 NKKEQEFRSIFQHIQSAQSQRSPSELFAQHIVTIVHHVKEHHFGSSGM 648


>AK223431-1|BAD97151.1|  665|Homo sapiens kinesin family member 22
           variant protein.
          Length = 665

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 22  ILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAIPSSILQ 81
           +L  T+ +KD E+   KTK  E++ K    +    E H  T     +H   +   +  L+
Sbjct: 470 VLMKTVEEKDLEIERLKTKQKELEAKMLAQKAEEKENHCPTMLRPLSH--RTVTGAKPLK 527

Query: 82  KTIVLPKQ 89
           K +V+P Q
Sbjct: 528 KAVVMPLQ 535


>AF117756-1|AAD22034.1|  955|Homo sapiens thyroid hormone
           receptor-associated protein complex component TRAP150
           protein.
          Length = 955

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 28  NKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAI 75
           NKK++E  +        Q +   +E F   +    H++ E HFG S +
Sbjct: 601 NKKEQEFRSIFQHIQSAQSQRSPSELFAQHIVTIVHHVKEHHFGSSGM 648


>AB017430-1|BAA33019.2|  665|Homo sapiens kinesin-like DNA binding
           protein protein.
          Length = 665

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 22  ILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAIPSSILQ 81
           +L  T+ +KD E+   KTK  E++ K    +    E H  T     +H   +   +  L+
Sbjct: 470 VLMKTVEEKDLEIERLKTKQKELEAKMLAQKAEEKENHCPTMLRPLSH--RTVTGAKPLK 527

Query: 82  KTIVLPKQ 89
           K +V+P Q
Sbjct: 528 KAVVMPLQ 535


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.317    0.131    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,158,164
Number of Sequences: 224733
Number of extensions: 482476
Number of successful extensions: 1509
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1501
Number of HSP's gapped (non-prelim): 17
length of query: 91
length of database: 73,234,838
effective HSP length: 69
effective length of query: 22
effective length of database: 57,728,261
effective search space: 1270021742
effective search space used: 1270021742
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)