GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002452-TA|BGIBMGA002452-PA|undefined
         (91 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023834-1|AAZ86755.1|  477|Drosophila melanogaster LD25916p pro...    35   0.016
AY061375-1|AAL28923.1|  459|Drosophila melanogaster LD29716p pro...    35   0.016
AE014298-822|AAN09156.1|  459|Drosophila melanogaster CG32756-PA...    35   0.016
AE014298-821|AAF46103.2|  477|Drosophila melanogaster CG12728-PA...    35   0.016
AE014297-3197|AAN13914.2|  459|Drosophila melanogaster CG31161-P...    29   0.60 
AY058602-1|AAL13831.1| 1257|Drosophila melanogaster LD29335p pro...    29   0.79 
AY058576-1|AAL13805.1| 1602|Drosophila melanogaster LD27111p pro...    29   0.79 
AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA...    29   0.79 
AE013599-964|AAF58876.2| 1693|Drosophila melanogaster CG30007-PB...    29   0.79 
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB...    29   1.0  
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P...    29   1.0  
AY118691-1|AAM50551.1| 1230|Drosophila melanogaster AT16851p pro...    27   3.2  
AE014297-3462|AAN13982.2| 1230|Drosophila melanogaster CG6129-PC...    27   3.2  
AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB...    27   3.2  
BT009983-1|AAQ22452.1|  622|Drosophila melanogaster RE53941p pro...    26   5.6  
AE014134-2686|AAF53511.1|  622|Drosophila melanogaster CG4132-PA...    26   5.6  
BT010314-1|AAQ23632.1|  674|Drosophila melanogaster AT28627p pro...    26   7.4  
BT010309-1|AAQ23627.1|  647|Drosophila melanogaster AT31706p pro...    26   7.4  
AE013599-1680|AAF58395.2|  647|Drosophila melanogaster CG4712-PA...    26   7.4  
AE013599-1679|AAM68604.1|  674|Drosophila melanogaster CG4712-PB...    26   7.4  
X16275-1|CAA34351.1|  621|Drosophila melanogaster lamin protein.       25   9.7  
BT029924-1|ABM92798.1|  377|Drosophila melanogaster IP06413p pro...    25   9.7  
BT001506-1|AAN71261.1|  622|Drosophila melanogaster LD38055p pro...    25   9.7  
AY071049-1|AAL48671.1|  149|Drosophila melanogaster RE13780p pro...    25   9.7  
AY061380-1|AAL28928.1|  731|Drosophila melanogaster LD30319p pro...    25   9.7  
AE014297-2871|AAF55810.2|  149|Drosophila melanogaster CG17272-P...    25   9.7  
AE014297-820|AAF54291.2|  372|Drosophila melanogaster CG11776-PA...    25   9.7  
AE014134-935|AAF52262.1|  622|Drosophila melanogaster CG6944-PA ...    25   9.7  
AE013599-1155|AAF58766.2|  731|Drosophila melanogaster CG16728-P...    25   9.7  

>BT023834-1|AAZ86755.1|  477|Drosophila melanogaster LD25916p
           protein.
          Length = 477

 Score = 34.7 bits (76), Expect = 0.016
 Identities = 17/63 (26%), Positives = 34/63 (53%)

Query: 1   MFQKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHM 60
           ++ ++  N +     L +   +L   ++ KDKEL  Y+T+  +++    +T+PF+ E  M
Sbjct: 116 LYSQMFLNTMSTALGLRVQIPLLLGIIHAKDKELNQYRTEGCQLRKVTVETKPFDLEAFM 175

Query: 61  NTH 63
           N H
Sbjct: 176 NKH 178


>AY061375-1|AAL28923.1|  459|Drosophila melanogaster LD29716p
           protein.
          Length = 459

 Score = 34.7 bits (76), Expect = 0.016
 Identities = 15/42 (35%), Positives = 26/42 (61%)

Query: 22  ILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTH 63
           +L   ++ KDKEL  Y+T+  +++    +T+PF+ E  MN H
Sbjct: 137 LLLGIIHAKDKELNQYRTEGCQLRRVTVETQPFDLEAFMNEH 178


>AE014298-822|AAN09156.1|  459|Drosophila melanogaster CG32756-PA
           protein.
          Length = 459

 Score = 34.7 bits (76), Expect = 0.016
 Identities = 15/42 (35%), Positives = 26/42 (61%)

Query: 22  ILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTH 63
           +L   ++ KDKEL  Y+T+  +++    +T+PF+ E  MN H
Sbjct: 137 LLLGIIHAKDKELNQYRTEGCQLRRVTVETQPFDLEAFMNEH 178


>AE014298-821|AAF46103.2|  477|Drosophila melanogaster CG12728-PA
           protein.
          Length = 477

 Score = 34.7 bits (76), Expect = 0.016
 Identities = 17/63 (26%), Positives = 34/63 (53%)

Query: 1   MFQKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHM 60
           ++ ++  N +     L +   +L   ++ KDKEL  Y+T+  +++    +T+PF+ E  M
Sbjct: 116 LYSQMFLNTMSTALGLRVQIPLLLGIIHAKDKELNQYRTEGCQLRKVTVETKPFDLEAFM 175

Query: 61  NTH 63
           N H
Sbjct: 176 NKH 178


>AE014297-3197|AAN13914.2|  459|Drosophila melanogaster CG31161-PA
           protein.
          Length = 459

 Score = 29.5 bits (63), Expect = 0.60
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 18  MSQTILRNTLNKKDKELTAYKTKFGEIQHKHK 49
           M   +LRN L K+D  L AY  +F +I  K K
Sbjct: 396 MEIDVLRNELRKRDTALNAYDCQFQQIMMKAK 427


>AY058602-1|AAL13831.1| 1257|Drosophila melanogaster LD29335p
           protein.
          Length = 1257

 Score = 29.1 bits (62), Expect = 0.79
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 43  EIQHKHKKTEPFNDELHMNTHNMYE 67
           E+QH+ + TEP  D + +N   +YE
Sbjct: 365 ELQHELEVTEPIKDYIQLNAERLYE 389


>AY058576-1|AAL13805.1| 1602|Drosophila melanogaster LD27111p protein.
          Length = 1602

 Score = 29.1 bits (62), Expect = 0.79
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 43   EIQHKHKKTEPFNDELHMNTHNMYE 67
            E+QH+ + TEP  D + +N   +YE
Sbjct: 986  ELQHELEVTEPIKDYIQLNAERLYE 1010


>AE013599-965|AAF58877.2| 1877|Drosophila melanogaster CG30007-PA,
            isoform A protein.
          Length = 1877

 Score = 29.1 bits (62), Expect = 0.79
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 43   EIQHKHKKTEPFNDELHMNTHNMYE 67
            E+QH+ + TEP  D + +N   +YE
Sbjct: 985  ELQHELEVTEPIKDYIQLNAERLYE 1009


>AE013599-964|AAF58876.2| 1693|Drosophila melanogaster CG30007-PB,
            isoform B protein.
          Length = 1693

 Score = 29.1 bits (62), Expect = 0.79
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 43   EIQHKHKKTEPFNDELHMNTHNMYE 67
            E+QH+ + TEP  D + +N   +YE
Sbjct: 986  ELQHELEVTEPIKDYIQLNAERLYE 1010


>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
            isoform B protein.
          Length = 7744

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 14/42 (33%), Positives = 24/42 (57%)

Query: 23   LRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHN 64
            L++TL++K ++L  YK +   I  K K+ + F D  H   +N
Sbjct: 3354 LQSTLHEKVEQLEKYKIQRELILQKEKEIDAFGDAAHALLNN 3395


>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
            isoform D protein.
          Length = 11707

 Score = 28.7 bits (61), Expect = 1.0
 Identities = 14/42 (33%), Positives = 24/42 (57%)

Query: 23   LRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHN 64
            L++TL++K ++L  YK +   I  K K+ + F D  H   +N
Sbjct: 3354 LQSTLHEKVEQLEKYKIQRELILQKEKEIDAFGDAAHALLNN 3395


>AY118691-1|AAM50551.1| 1230|Drosophila melanogaster AT16851p
           protein.
          Length = 1230

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 16/49 (32%), Positives = 22/49 (44%)

Query: 20  QTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYET 68
           Q +LRN   +K    T  K K   IQ   +K +  NDE  M    + +T
Sbjct: 706 QAMLRNLQEEKSNLETDRKMKISAIQALEEKLKHRNDECQMLRERLAQT 754


>AE014297-3462|AAN13982.2| 1230|Drosophila melanogaster CG6129-PC,
           isoform C protein.
          Length = 1230

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 16/49 (32%), Positives = 22/49 (44%)

Query: 20  QTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYET 68
           Q +LRN   +K    T  K K   IQ   +K +  NDE  M    + +T
Sbjct: 706 QAMLRNLQEEKSNLETDRKMKISAIQALEEKLKHRNDECQMLRERLAQT 754


>AE014297-3461|AAF56238.3| 2048|Drosophila melanogaster CG6129-PB,
            isoform B protein.
          Length = 2048

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 16/49 (32%), Positives = 22/49 (44%)

Query: 20   QTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYET 68
            Q +LRN   +K    T  K K   IQ   +K +  NDE  M    + +T
Sbjct: 1524 QAMLRNLQEEKSNLETDRKMKISAIQALEEKLKHRNDECQMLRERLAQT 1572


>BT009983-1|AAQ22452.1|  622|Drosophila melanogaster RE53941p
           protein.
          Length = 622

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 5/57 (8%)

Query: 8   NLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHN 64
           N LK+  D   +   L++TL+ +     A K+  G+ Q +H+KT   +D  H++ HN
Sbjct: 447 NELKVKRDNSTTHPNLQHTLSLR----RAGKSSNGQ-QQRHRKTLSMSDCTHISQHN 498


>AE014134-2686|AAF53511.1|  622|Drosophila melanogaster CG4132-PA
           protein.
          Length = 622

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 5/57 (8%)

Query: 8   NLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHN 64
           N LK+  D   +   L++TL+ +     A K+  G+ Q +H+KT   +D  H++ HN
Sbjct: 447 NELKVKRDNSTTHPNLQHTLSLR----RAGKSSNGQ-QQRHRKTLSMSDCTHISQHN 498


>BT010314-1|AAQ23632.1|  674|Drosophila melanogaster AT28627p
           protein.
          Length = 674

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 24  RNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAIPSSILQKT 83
           RN   K+ + L  Y T+    +H  +K+    +++H+   N+ E H   + + S + ++ 
Sbjct: 547 RNIELKRQRRL--YHTELHMTKHNREKSHELKNKIHVLKDNLLEKHKLKNKLKSELCRRK 604

Query: 84  I 84
           +
Sbjct: 605 L 605


>BT010309-1|AAQ23627.1|  647|Drosophila melanogaster AT31706p
           protein.
          Length = 647

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 24  RNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAIPSSILQKT 83
           RN   K+ + L  Y T+    +H  +K+    +++H+   N+ E H   + + S + ++ 
Sbjct: 520 RNIELKRQRRL--YHTELHMTKHNREKSHELKNKIHVLQDNLLEKHKLKNKLKSELCRRK 577

Query: 84  I 84
           +
Sbjct: 578 L 578


>AE013599-1680|AAF58395.2|  647|Drosophila melanogaster CG4712-PA,
           isoform A protein.
          Length = 647

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 24  RNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAIPSSILQKT 83
           RN   K+ + L  Y T+    +H  +K+    +++H+   N+ E H   + + S + ++ 
Sbjct: 520 RNIELKRQRRL--YHTELHMTKHNREKSHELKNKIHVLKDNLLEKHKLKNKLKSELCRRK 577

Query: 84  I 84
           +
Sbjct: 578 L 578


>AE013599-1679|AAM68604.1|  674|Drosophila melanogaster CG4712-PB,
           isoform B protein.
          Length = 674

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 2/61 (3%)

Query: 24  RNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAIPSSILQKT 83
           RN   K+ + L  Y T+    +H  +K+    +++H+   N+ E H   + + S + ++ 
Sbjct: 547 RNIELKRQRRL--YHTELHMTKHNREKSHELKNKIHVLKDNLLEKHKLKNKLKSELCRRK 604

Query: 84  I 84
           +
Sbjct: 605 L 605


>X16275-1|CAA34351.1|  621|Drosophila melanogaster lamin protein.
          Length = 621

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 13  INDLWMSQTILRNTLNKKDKELTA-------YKTKFGEIQHKHKKTEPFNDELH 59
           I  LW     L+N L+KK KE T        Y+++  E+ +K+ +      +L+
Sbjct: 128 IKRLWEENEELKNKLDKKTKECTTAEGNVRMYESRANELNNKYNQANADRKKLN 181


>BT029924-1|ABM92798.1|  377|Drosophila melanogaster IP06413p
          protein.
          Length = 377

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 20 QTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELH 59
          QT+ +N L +K K+L++  T  G+  ++ K+T     +LH
Sbjct: 56 QTMAKNKLKRK-KKLSSSLTSVGDTVNQEKRTRIEGIQLH 94


>BT001506-1|AAN71261.1|  622|Drosophila melanogaster LD38055p
           protein.
          Length = 622

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 13  INDLWMSQTILRNTLNKKDKELTA-------YKTKFGEIQHKHKKTEPFNDELH 59
           I  LW     L+N L+KK KE T        Y+++  E+ +K+ +      +L+
Sbjct: 129 IKRLWEENEELKNKLDKKTKECTTAEGNVRMYESRANELNNKYNQANADRKKLN 182


>AY071049-1|AAL48671.1|  149|Drosophila melanogaster RE13780p
          protein.
          Length = 149

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 16/50 (32%), Positives = 21/50 (42%)

Query: 9  LLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDEL 58
          L  I+  L +S TI       K K        F +I H+H K E   DE+
Sbjct: 32 LTVIMRSLGLSPTIQELVSYLKQKNGKMSFADFLDIMHQHSKVESLPDEV 81


>AY061380-1|AAL28928.1|  731|Drosophila melanogaster LD30319p
           protein.
          Length = 731

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 14/56 (25%), Positives = 24/56 (42%)

Query: 7   QNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNT 62
           + L K +ND       L+N +     E T  K+KF    +     EP   +L +++
Sbjct: 485 ETLRKQLNDYKSEINQLKNVVQMLSSENTQLKSKFSSASNNSVYDEPLRIDLSLSS 540


>AE014297-2871|AAF55810.2|  149|Drosophila melanogaster CG17272-PA
          protein.
          Length = 149

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 16/50 (32%), Positives = 21/50 (42%)

Query: 9  LLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDEL 58
          L  I+  L +S TI       K K        F +I H+H K E   DE+
Sbjct: 32 LTVIMRSLGLSPTIQELVSYLKQKNGKMSFADFLDIMHQHSKVESLPDEV 81


>AE014297-820|AAF54291.2|  372|Drosophila melanogaster CG11776-PA
          protein.
          Length = 372

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 20 QTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELH 59
          QT+ +N L +K K+L++  T  G+  ++ K+T     +LH
Sbjct: 56 QTMAKNKLKRK-KKLSSSLTSVGDTVNQEKRTRIEGIQLH 94


>AE014134-935|AAF52262.1|  622|Drosophila melanogaster CG6944-PA
           protein.
          Length = 622

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 13  INDLWMSQTILRNTLNKKDKELTA-------YKTKFGEIQHKHKKTEPFNDELH 59
           I  LW     L+N L+KK KE T        Y+++  E+ +K+ +      +L+
Sbjct: 129 IKRLWEENEELKNKLDKKTKECTTAEGNVRMYESRANELNNKYNQANADRKKLN 182


>AE013599-1155|AAF58766.2|  731|Drosophila melanogaster CG16728-PA
           protein.
          Length = 731

 Score = 25.4 bits (53), Expect = 9.7
 Identities = 14/56 (25%), Positives = 24/56 (42%)

Query: 7   QNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNT 62
           + L K +ND       L+N +     E T  K+KF    +     EP   +L +++
Sbjct: 485 ETLRKQLNDYKSEINQLKNVVQMLSSENTQLKSKFSSASNNSVYDEPLRIDLSLSS 540


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.131    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,633,332
Number of Sequences: 52641
Number of extensions: 175850
Number of successful extensions: 586
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 562
Number of HSP's gapped (non-prelim): 31
length of query: 91
length of database: 24,830,863
effective HSP length: 70
effective length of query: 21
effective length of database: 21,145,993
effective search space: 444065853
effective search space used: 444065853
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)