Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002452-TA|BGIBMGA002452-PA|undefined
(91 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46828-8|CAE17900.1| 166|Caenorhabditis elegans Hypothetical pr... 29 0.32
AL023832-3|CAE17976.1| 166|Caenorhabditis elegans Hypothetical ... 29 0.32
Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical p... 28 0.97
Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical p... 28 0.97
U29378-3|AAA68727.2| 667|Caenorhabditis elegans Hypothetical pr... 28 0.97
Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical p... 27 1.7
AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein. 27 1.7
Z83233-2|CAB05761.1| 338|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z81070-7|CAD30437.1| 608|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z81070-6|CAB03000.1| 677|Caenorhabditis elegans Hypothetical pr... 27 2.2
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 27 2.2
AF273797-2|AAG15146.1| 338|Caenorhabditis elegans nuclear recep... 27 2.2
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 26 3.0
U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo mitoc... 26 3.0
AF016451-12|AAB65998.1| 1443|Caenorhabditis elegans Hypothetical... 26 3.0
U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical pr... 26 3.9
AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical ... 26 3.9
L14429-4|AAA28217.2| 171|Caenorhabditis elegans Hypothetical pr... 25 5.2
Z84712-2|CAB06546.2| 551|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z81130-12|CAB03421.2| 551|Caenorhabditis elegans Hypothetical p... 25 6.8
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 25 6.8
U40797-6|AAB37547.1| 235|Caenorhabditis elegans Hypothetical pr... 25 6.8
U40060-4|AAY86193.1| 406|Caenorhabditis elegans Hypothetical pr... 25 6.8
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 25 6.8
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 25 6.8
Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical pr... 25 9.0
Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical pr... 25 9.0
Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr... 25 9.0
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 25 9.0
Z71261-5|CAA95800.1| 186|Caenorhabditis elegans Hypothetical pr... 25 9.0
Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical pr... 25 9.0
Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical pr... 25 9.0
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 25 9.0
AF000261-2|AAB52925.1| 313|Caenorhabditis elegans Hypothetical ... 25 9.0
AC024791-24|AAF60656.1| 627|Caenorhabditis elegans Hypothetical... 25 9.0
>Z46828-8|CAE17900.1| 166|Caenorhabditis elegans Hypothetical
protein Y19D2B.2 protein.
Length = 166
Score = 29.5 bits (63), Expect = 0.32
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 21 TILRNTLNKKDKELTAYKTKFGEI---QHKHKKTEPFNDELHMNTHNMYETHF 70
++ R L ++ ++L K EI QHK K E D+ T N Y+ HF
Sbjct: 98 SVSRKCLQERIQKLEQEKAALIEIMISQHKSKYEEKLKDKKEKRTSNYYKKHF 150
>AL023832-3|CAE17976.1| 166|Caenorhabditis elegans Hypothetical
protein Y19D2B.2 protein.
Length = 166
Score = 29.5 bits (63), Expect = 0.32
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 21 TILRNTLNKKDKELTAYKTKFGEI---QHKHKKTEPFNDELHMNTHNMYETHF 70
++ R L ++ ++L K EI QHK K E D+ T N Y+ HF
Sbjct: 98 SVSRKCLQERIQKLEQEKAALIEIMISQHKSKYEEKLKDKKEKRTSNYYKKHF 150
>Z98866-21|CAD56612.1| 743|Caenorhabditis elegans Hypothetical
protein Y49E10.23b protein.
Length = 743
Score = 27.9 bits (59), Expect = 0.97
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 7 QNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKT--EPFNDELHMN 61
+ LL+ I + +++ +L+N N+ KEL A + E++ + K T E H N
Sbjct: 69 EKLLRTIRERDLNEELLKNVQNQHKKELDAQVRRIRELEVQLKTTTDRGLAQEAHFN 125
>Z98866-20|CAB11567.1| 734|Caenorhabditis elegans Hypothetical
protein Y49E10.23a protein.
Length = 734
Score = 27.9 bits (59), Expect = 0.97
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 7 QNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKT--EPFNDELHMN 61
+ LL+ I + +++ +L+N N+ KEL A + E++ + K T E H N
Sbjct: 69 EKLLRTIRERDLNEELLKNVQNQHKKELDAQVRRIRELEVQLKTTTDRGLAQEAHFN 125
>U29378-3|AAA68727.2| 667|Caenorhabditis elegans Hypothetical
protein F08C6.3 protein.
Length = 667
Score = 27.9 bits (59), Expect = 0.97
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 3 QKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHK 47
QK+ L + ++D+ +SQT+++ T+N D + E+ HK
Sbjct: 130 QKVRVELSQFVDDIAVSQTMMK-TINDTDANDRGFLEALHELHHK 173
>Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical
protein T09A5.10 protein.
Length = 821
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 22 ILRNTLNKKDKELTAYKTKFGEIQHKHK 49
IL+N+L +K+ E K F + KHK
Sbjct: 570 ILKNSLAEKENETVTLKENFASVVMKHK 597
>AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein.
Length = 821
Score = 27.1 bits (57), Expect = 1.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 22 ILRNTLNKKDKELTAYKTKFGEIQHKHK 49
IL+N+L +K+ E K F + KHK
Sbjct: 570 ILKNSLAEKENETVTLKENFASVVMKHK 597
>Z83233-2|CAB05761.1| 338|Caenorhabditis elegans Hypothetical
protein K06B4.2 protein.
Length = 338
Score = 26.6 bits (56), Expect = 2.2
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 24 RNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHM-NTHN 64
R TL+K ++ +F +++++HK FND L + N +N
Sbjct: 264 RETLSKYQNMYASFLFRFCQLKNQHKAPTRFNDILSICNVNN 305
>Z81070-7|CAD30437.1| 608|Caenorhabditis elegans Hypothetical
protein F26E4.7b protein.
Length = 608
Score = 26.6 bits (56), Expect = 2.2
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 14 NDLWMSQTILRNTLNKKDKELTAYKTKFGEIQH 46
N LW QT++R+T+N +T ++ G +
Sbjct: 92 NKLWDKQTLIRSTINSGYTYITQFENNPGNFSY 124
>Z81070-6|CAB03000.1| 677|Caenorhabditis elegans Hypothetical
protein F26E4.7a protein.
Length = 677
Score = 26.6 bits (56), Expect = 2.2
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 14 NDLWMSQTILRNTLNKKDKELTAYKTKFGEIQH 46
N LW QT++R+T+N +T ++ G +
Sbjct: 92 NKLWDKQTLIRSTINSGYTYITQFENNPGNFSY 124
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 26.6 bits (56), Expect = 2.2
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 21 TILRNTLNKKDKELTAYKTKFGEIQH 46
T+L++ +++KD+E+ A K +IQH
Sbjct: 1162 TMLQDLMSRKDEEVNATKRAIEQIQH 1187
>AF273797-2|AAG15146.1| 338|Caenorhabditis elegans nuclear receptor
NHR-52 protein.
Length = 338
Score = 26.6 bits (56), Expect = 2.2
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 24 RNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHM-NTHN 64
R TL+K ++ +F +++++HK FND L + N +N
Sbjct: 264 RETLSKYQNMYASFLFRFCQLKNQHKAPTRFNDILSICNVNN 305
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 26.2 bits (55), Expect = 3.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 44 IQHKHKKTEPFNDELHMNT 62
IQ KH+K + F ELH N+
Sbjct: 1542 IQQKHQKQQAFEAELHANS 1560
>U29244-14|AAC71095.1| 774|Caenorhabditis elegans Fzo (fzo
mitochondrial fusion protein)related protein 1 protein.
Length = 774
Score = 26.2 bits (55), Expect = 3.0
Identities = 13/61 (21%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 1 MFQKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHK-KTEPFNDELH 59
M K+ NL ++ ++ L+N LN+ + + F + + ++ +TE E+H
Sbjct: 378 MIGKMRLNLNSVLTSAAEQRSKLQNNLNESTRTFNECRVNFTQFEKAYREQTEQLRAEVH 437
Query: 60 M 60
+
Sbjct: 438 L 438
>AF016451-12|AAB65998.1| 1443|Caenorhabditis elegans Hypothetical
protein C03A7.1 protein.
Length = 1443
Score = 26.2 bits (55), Expect = 3.0
Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 34 LTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETH--FGGSAIPSSILQKTI 84
L + T F E K++ +P N + + TH + + S+ P+ ++KTI
Sbjct: 491 LKTFLTDFNESVMKNRNLKPTNKFMILKTHLLGKARDCISNSSAPAEAIEKTI 543
>U40799-1|AAA81479.1| 250|Caenorhabditis elegans Hypothetical
protein F42C5.3 protein.
Length = 250
Score = 25.8 bits (54), Expect = 3.9
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 24 RNTLNKKDKE-LTAYKTKFGEIQHKHKKTEPFNDELHMNTHN 64
+ T ++K +E L +K + E++ K+KK E E +MN N
Sbjct: 23 KETFDRKRRETLEKHKKELDELEKKNKKEEDDLREQNMNLWN 64
>AC025716-1|AAK39606.1| 788|Caenorhabditis elegans Hypothetical
protein Y39G10AR.11 protein.
Length = 788
Score = 25.8 bits (54), Expect = 3.9
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
Query: 27 LNKKDKELT----AYKTKFGEIQHKH-KKTEPFNDELHMNTHNM 65
LNK+ EL AYK + GEI KH ++T F++E H M
Sbjct: 298 LNKEMTELEELRDAYKQQIGEITEKHAQQTMTFSNEKAKFCHAM 341
>L14429-4|AAA28217.2| 171|Caenorhabditis elegans Hypothetical
protein ZK652.8 protein.
Length = 171
Score = 25.4 bits (53), Expect = 5.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 27 LNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMN 61
L + + ++T GE++ KHKK DE N
Sbjct: 54 LKQNEAQMTILTATGGELKEKHKKIRGLLDEAKAN 88
>Z84712-2|CAB06546.2| 551|Caenorhabditis elegans Hypothetical
protein T24B1.1 protein.
Length = 551
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 24 RNTLNKKDKELTAYKTKFGEIQHKHKK 50
++ L KD +++ KTK E++ K +K
Sbjct: 156 KSQLFAKDSQISVLKTKLSEVERKFEK 182
>Z81130-12|CAB03421.2| 551|Caenorhabditis elegans Hypothetical
protein T24B1.1 protein.
Length = 551
Score = 25.0 bits (52), Expect = 6.8
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 24 RNTLNKKDKELTAYKTKFGEIQHKHKK 50
++ L KD +++ KTK E++ K +K
Sbjct: 156 KSQLFAKDSQISVLKTKLSEVERKFEK 182
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 14 NDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDEL--HMNTHNMYETHFG 71
ND+ + + D +L+A + EI+ + KK + +E+ HMN + +++
Sbjct: 4 NDIIDDDVLNIEDMTGDDADLSAIEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSS 63
Query: 72 GSAI 75
S +
Sbjct: 64 QSLL 67
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 25.0 bits (52), Expect = 6.8
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 5 ITQNLLKIINDLWMS---QTILRNTLNKKDKELTAYKTKFGEIQHKHKK---TEPFN--- 55
IT ++ +++ D S QTI+R L +K T + GE+ +H + + FN
Sbjct: 202 ITDDICELLADRKSSGELQTIIRENLYQKTVPYTTRPPREGEVDGEHYRFVSVDDFNKLL 261
Query: 56 DELHMNTHNMYETHFGGSAIP 76
D + + Y+ H G+ P
Sbjct: 262 DSGDLLENGTYQGHLYGTPRP 282
>U40797-6|AAB37547.1| 235|Caenorhabditis elegans Hypothetical
protein C28C12.4 protein.
Length = 235
Score = 25.0 bits (52), Expect = 6.8
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 4 KITQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEP 53
++ QN+ ++++ L +QT L +N K++ K ++ ++ + P
Sbjct: 103 EVQQNVTQVVSQLSAAQTALEAVMNNKNQTRQQMKEAIDNLKTQYPQEIP 152
>U40060-4|AAY86193.1| 406|Caenorhabditis elegans Hypothetical
protein F38B6.8 protein.
Length = 406
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 30 KDKELTAYKTKFGEIQHKHKKTEPFNDE---LHMNTHNMYET 68
KD+ + +T E++ ++KK E NDE LH + ++ET
Sbjct: 51 KDEASSTRETSLSEMEEENKKLEISNDETVILH-TSQTLFET 91
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 42 GEIQHKHKKTEPFNDELHMNTHNMYETHFGGSAIPSSI 79
G QH H + + + HN Y + GG P SI
Sbjct: 237 GSYQHNHNHSNTKDYGRQYSNHNHYSNYHGGGG-PGSI 273
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 27 LNKKDKELTAYKTKFGEIQHKHKKTEPFNDE 57
L+KKD E K +G I + ++ FN+E
Sbjct: 1673 LSKKDVEELLKKGAYGSIMDEENESSKFNEE 1703
>Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 25 NTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETH 69
N L ++ + T + KF E KH++ DE NT + E H
Sbjct: 830 NQLEIENLKKTIKELKF-ETLKKHEELGALRDEKEANTQKLKENH 873
>Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 25 NTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETH 69
N L ++ + T + KF E KH++ DE NT + E H
Sbjct: 830 NQLEIENLKKTIKELKF-ETLKKHEELGALRDEKEANTQKLKENH 873
>Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical
protein C38D9.3 protein.
Length = 1496
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 9 LLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYET 68
+L+I N S L+NT K+++ + + ++ +I++ HK F+ E H + YE+
Sbjct: 394 MLEIYNREEKSSQDLKNTDIKQNQMIQSTESIQPDIRNIHKLLIKFSGEEHEDFEFFYES 453
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 23 LRNTLNKKDKELTAYKTKFGEIQHKH----KKTEPFNDELHMNTHNMYETH 69
L+N K +++ + ++TK EI ++ +K + F +EL + E H
Sbjct: 171 LKNKTMKLNEKNSQFQTKLAEISSENRNLERKVQKFREELIVKDQRSLEVH 221
>Z71261-5|CAA95800.1| 186|Caenorhabditis elegans Hypothetical
protein F21C3.6 protein.
Length = 186
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/57 (19%), Positives = 28/57 (49%)
Query: 14 NDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDELHMNTHNMYETHF 70
ND +Q I ++ N L + + + +++ + KKT+ +E + ++ + + F
Sbjct: 125 NDFIQTQQIEKSHFNAAGDRLRSSEIQLSKLESELKKTKQIREEYYQDSMQSWFSRF 181
>Z50863-5|CAA90738.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 21 TILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDEL 58
T LR++ +KDK KF +Q KK+E +D +
Sbjct: 209 TALRSSAYEKDKRYEMLVQKFKRLQKCLKKSENDDDRM 246
>Z49153-2|CAA89023.2| 746|Caenorhabditis elegans Hypothetical
protein C14H10.2a protein.
Length = 746
Score = 24.6 bits (51), Expect = 9.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 21 TILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDEL 58
T LR++ +KDK KF +Q KK+E +D +
Sbjct: 209 TALRSSAYEKDKRYEMLVQKFKRLQKCLKKSENDDDRM 246
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 24.6 bits (51), Expect = 9.0
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 1 MFQKITQNLLKIINDLWMSQTI--LRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDEL 58
M +K+ Q +LK + + + +R T K + K + E HK K + N
Sbjct: 820 MRKKVKQQMLKKMEEAAAKENEKEIRKTKKKSKDKKEGRKEESKEKAHKKSKPKKSNRRG 879
Query: 59 HMN 61
HMN
Sbjct: 880 HMN 882
>AF000261-2|AAB52925.1| 313|Caenorhabditis elegans Hypothetical
protein F19B10.5 protein.
Length = 313
Score = 24.6 bits (51), Expect = 9.0
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 7 QNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDE 57
Q L I L + +LN+ E+T + K E++ + KKT DE
Sbjct: 80 QQLQAKIQKLGQEAIVHYQSLNEAKAEITKLQHKNQELEDEAKKTNDEKDE 130
>AC024791-24|AAF60656.1| 627|Caenorhabditis elegans Hypothetical
protein Y47G6A.4 protein.
Length = 627
Score = 24.6 bits (51), Expect = 9.0
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 14 NDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFNDE 57
+D + QTIL T+++ D E+ A + + + Q+ + P N +
Sbjct: 442 SDTSLPQTILARTISRNDAEVYAARQRDTDEQYDVHQEGPSNHD 485
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.131 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,378,426
Number of Sequences: 27539
Number of extensions: 91118
Number of successful extensions: 334
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 311
Number of HSP's gapped (non-prelim): 37
length of query: 91
length of database: 12,573,161
effective HSP length: 69
effective length of query: 22
effective length of database: 10,672,970
effective search space: 234805340
effective search space used: 234805340
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)
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