GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002451-TA|BGIBMGA002451-PA|IPR001478|PDZ/DHR/GLGF
         (478 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    26   2.6  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 152 DGDVTITRLAAGGAAKKDGRLQIGDVLLQVNDISVE 187
           DG   + R+  GG   +   L +GD + ++N   V+
Sbjct: 496 DGRCIVARIMHGGMIHRQATLHVGDEIREINGQPVQ 531



 Score = 25.4 bits (53), Expect = 3.4
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 6/67 (8%)

Query: 246 ISHIAVGGAAHHDGRLRLGDKILAVRDEDGIETSLVGATHAQAVSALRNTGEQVTLVVLP 305
           ++ I  GG  H    L +GD+I   R+ +G    +   T +Q    LR+    VT  ++P
Sbjct: 501 VARIMHGGMIHRQATLHVGDEI---REING--QPVQHQTVSQLQRLLRDARGSVTFKIVP 555

Query: 306 A-GSVPP 311
           +  S PP
Sbjct: 556 SYRSAPP 562


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.129    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 347,896
Number of Sequences: 2123
Number of extensions: 10475
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 3
length of query: 478
length of database: 516,269
effective HSP length: 67
effective length of query: 411
effective length of database: 374,028
effective search space: 153725508
effective search space used: 153725508
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 50 (24.2 bits)