GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002450-TA|BGIBMGA002450-PA|IPR001360|Glycoside
hydrolase, family 1
         (419 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    25   0.76 
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    23   4.0  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   7.1  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   9.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   9.3  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   9.3  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   9.3  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   9.3  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 25.4 bits (53), Expect = 0.76
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 28  NGDIAADSYHKFKEDVQLIKALGVKYYRLSISWP 61
           NG I  +S HK+K  V L++ +G +  R+ IS+P
Sbjct: 141 NGQIMLNSLHKYKPTVHLVR-VGTEPRRV-ISFP 172


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)

Query: 183 KAYHLYEKEFKPHQKGKV 200
           K  HL++ +F PH++ K+
Sbjct: 110 KLQHLHQSKFNPHEEVKL 127


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 7.1
 Identities = 8/34 (23%), Positives = 20/34 (58%)

Query: 50  GVKYYRLSISWPRLLPNGTSNNISTDGARYYRNL 83
           G+ ++ L+ SWP+L+   +   ++ D  +  ++L
Sbjct: 275 GIIFFNLAKSWPQLIEKWSRVEMALDNWKNDKSL 308


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 269 RSRLPYFTAEEVKIIRGSSDFFGLNHYTTYLMSPSEMEFSWSIP 312
           +  +P F A     I  S+ F   N   T+L+   + E ++S P
Sbjct: 288 KDNVPVFAAARFYAINRSTIFRMFNAIVTFLIVMVQFETNYSQP 331


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 269 RSRLPYFTAEEVKIIRGSSDFFGLNHYTTYLMSPSEMEFSWSIP 312
           +  +P F A     I  S+ F   N   T+L+   + E ++S P
Sbjct: 608 KDNVPVFAAARFYAINRSTIFRMFNAIVTFLIVMVQFETNYSQP 651


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query: 48  ALGVKYYRLSISWPRLL 64
           A G  Y +L++ WPR +
Sbjct: 114 ASGYLYLKLAMKWPRFM 130


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query: 48  ALGVKYYRLSISWPRLL 64
           A G  Y +L++ WPR +
Sbjct: 114 ASGYLYLKLAMKWPRFM 130


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)

Query: 48  ALGVKYYRLSISWPRLL 64
           A G  Y +L++ WPR +
Sbjct: 114 ASGYLYLKLAMKWPRFM 130


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.140    0.447 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,436
Number of Sequences: 317
Number of extensions: 5780
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 8
length of query: 419
length of database: 114,650
effective HSP length: 59
effective length of query: 360
effective length of database: 95,947
effective search space: 34540920
effective search space used: 34540920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)