Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002450-TA|BGIBMGA002450-PA|IPR001360|Glycoside
hydrolase, family 1
(419 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47095| Best HMM Match : No HMM Matches (HMM E-Value=.) 334 8e-92
SB_26096| Best HMM Match : Glyco_hydro_1 (HMM E-Value=5.3e-19) 180 3e-45
SB_46844| Best HMM Match : VWA (HMM E-Value=1.3e-31) 83 5e-16
SB_39342| Best HMM Match : Glyco_hydro_1 (HMM E-Value=0.17) 79 5e-15
SB_23676| Best HMM Match : DUF904 (HMM E-Value=0.44) 33 0.43
SB_10203| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.43
SB_41765| Best HMM Match : Transgly_assoc (HMM E-Value=0.49) 33 0.57
SB_12810| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.00
SB_51280| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_15534| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_41898| Best HMM Match : EGF_CA (HMM E-Value=3.9e-14) 29 5.3
SB_1943| Best HMM Match : Vicilin_N (HMM E-Value=0.67) 29 7.0
SB_44831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
>SB_47095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 334 bits (821), Expect = 8e-92
Identities = 173/426 (40%), Positives = 240/426 (56%), Gaps = 24/426 (5%)
Query: 3 NVNGKGESIWDTYVHEHP-EYTPDKSNGDIAADSYHKFKEDVQLIKALGVKYYRLSISWP 61
+V+GKG +WD H H + GD+A DSYHK+KEDVQL++ LGVK YR SISWP
Sbjct: 56 DVDGKGLGLWDYLTHSHQFSHLFKNQTGDVACDSYHKYKEDVQLLRNLGVKAYRFSISWP 115
Query: 62 RLLPNGTSNNISTDGARYYRNLFEELLKANITPIVTLFHWDMPTPFMDLRGWNNPVIVDY 121
R+LP GT I+T G YY NL ELL NI P+ T++HWD+P PF W N I+++
Sbjct: 116 RILPKGTKEIINTKGIEYYNNLINELLHYNIQPVATIYHWDLPVPFRMAGSWTNSSIIEH 175
Query: 122 FVDYARVAFNLYGDIIKTWTTINEPHQHCYQGYGADYFAPAIKSHGVGEYLCAHYLILSH 181
F DYA + F +GD +K W TINEP + ++AP S +YL H L+L+H
Sbjct: 176 FNDYAEICFKNFGDRVKKWITINEPAIELL--FMKTHWAPPASSR--EQYLAGHNLLLAH 231
Query: 182 AKAYHLYEKEFKPHQKGKVGITLDAFMGIPKDPRNFQDVLAVRSYLQIHKLHFQFDLYAH 241
AK YH Y +K QKGK+ I+L+ G + D A Y+Q + HF +Y
Sbjct: 232 AKVYHTYNNTYKATQKGKISISLNG-QGAEPLTDSQADKEAADRYMQFYVGHFAVPIY-- 288
Query: 242 PIFSAEGDYPTFVRQRINNMSLAQGFARSRLPYFTAEEVKIIRGSSDFFGLNHYTTYLMS 301
GDYP ++ I N S A G SRLP FT E+ K+I+G++D+F NHY++ L+
Sbjct: 289 ----VSGDYPEIMKTLIANKSTAVGIP-SRLPEFTEEQKKMIKGTADYFATNHYSSDLVQ 343
Query: 302 PSEMEFSWSIP-SMDHDAQVRMEQDPHWEKPGTDWLSVYPEGFRKLLNYVSDNYGREIPI 360
+ P M D ++ DP+W + +W +V P G RK L Y DNYG + +
Sbjct: 344 HHDFYNGAKTPQEMWTDGNYVLKGDPNWNRTAFNW-AVVPWGLRKFLKYFKDNYG-DPEV 401
Query: 361 IVTENGVGDKGQ--------LKDYDRISYFNKYLYQLLLAIHEDNCNIIGYFAWTLMDDF 412
I+TENG G+ L+D R+ +FN+Y+ ++ A D + GY+AW+LMD+F
Sbjct: 402 IITENGCSAPGEYLKTVPERLEDDFRVDFFNRYINEVYKAYKLDGVKVKGYYAWSLMDNF 461
Query: 413 EWSDGY 418
EW GY
Sbjct: 462 EWFQGY 467
>SB_26096| Best HMM Match : Glyco_hydro_1 (HMM E-Value=5.3e-19)
Length = 204
Score = 180 bits (437), Expect = 3e-45
Identities = 77/169 (45%), Positives = 106/169 (62%), Gaps = 1/169 (0%)
Query: 3 NVNGKGESIWDTYVHEHPEYTPDKSNGDIAADSYHKFKEDVQLIKALGVKYYRLSISWPR 62
N +GKG +IWD + H+ + N DIA DSYHK ED+QL+K+LGV +YR SISW R
Sbjct: 35 NEDGKGPNIWDAFSHKTGNIH-NNENADIACDSYHKTDEDIQLLKSLGVSHYRFSISWAR 93
Query: 63 LLPNGTSNNISTDGARYYRNLFEELLKANITPIVTLFHWDMPTPFMDLRGWNNPVIVDYF 122
+LP+G + ++ G YY + ++LL NI P+ TL+H+D+P D GW N ++++F
Sbjct: 94 ILPDGLLDVVNKSGVEYYNRVIDKLLAVNIQPVATLYHFDLPQALQDKGGWLNSRVIEWF 153
Query: 123 VDYARVAFNLYGDIIKTWTTINEPHQHCYQGYGADYFAPAIKSHGVGEY 171
YARV F L+GD ++ W TINEPH+ GYG FAP IK Y
Sbjct: 154 AGYARVCFKLFGDRVRLWLTINEPHEEALNGYGYGNFAPGIKRLDTAPY 202
>SB_46844| Best HMM Match : VWA (HMM E-Value=1.3e-31)
Length = 332
Score = 82.6 bits (195), Expect = 5e-16
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 9/93 (9%)
Query: 334 DWLSVYPEGFRKLLNYVSDNYGREIPIIVTENGVGDKGQ--------LKDYDRISYFNKY 385
DWL P G RK+LN++ NY II+TENG G+ L+D R++Y Y
Sbjct: 204 DWLYCTPFGLRKILNWIKGNYNNP-EIIITENGFSCDGEEDLSGDAALEDTHRVNYLKGY 262
Query: 386 LYQLLLAIHEDNCNIIGYFAWTLMDDFEWSDGY 418
L Q L ++ +D + GYF W+LMD+FEW DGY
Sbjct: 263 LNQALKSVIKDGVQLTGYFLWSLMDNFEWDDGY 295
>SB_39342| Best HMM Match : Glyco_hydro_1 (HMM E-Value=0.17)
Length = 147
Score = 79.4 bits (187), Expect = 5e-15
Identities = 52/158 (32%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 177 LILSHAKAYHLYEKEFKPHQKGKVGITLDAFMGIPKDPRNFQDVLAVRSYLQIHKLHFQF 236
++ +HA A+H+Y++EF+ Q GK+ I ++ PK + + DV A LQ +
Sbjct: 1 MLRAHASAWHIYDEEFRGSQHGKLSIVTNSQFYEPKSTKPY-DVAAADRGLQ-----WYL 54
Query: 237 DLYAHPIFSAEGDYPTFVRQRINNMSLAQGFARSRLPYFTAEEVKIIRGSSDFFGLNHY- 295
AHP+ GDYP ++Q + S QG RLP FTAEE I+G+ DFF LN Y
Sbjct: 55 GWIAHPV--VYGDYPEVMKQVVAEKSKKQGIP-CRLPSFTAEEKTYIKGTIDFFALNFYS 111
Query: 296 ---TTYLMSPSEMEFSWSIPSMDHDAQVRMEQDPHWEK 330
T ++ P +W+ + D +++ + HW K
Sbjct: 112 ASLTEHIDIPMNSNENWNYIT---DQEIKTSRREHWIK 146
>SB_23676| Best HMM Match : DUF904 (HMM E-Value=0.44)
Length = 591
Score = 33.1 bits (72), Expect = 0.43
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 9 ESIWDTYVHEHPEYTPDKSNGDIAADSYHKFKEDVQLIKALGVKYYRLSISWPRL---LP 65
E+ WD + P+ P KS D Y + V +K +G K YRL + L LP
Sbjct: 197 ENAWDRIREKFPKMDPVKSPFTATLDEYERV---VVKLKRMGGKSYRLFDAGGGLNEKLP 253
Query: 66 NGTSNNISTDGARYYRNLFEELLK 89
+ NN+ R+ EE+ K
Sbjct: 254 SSIKNNLGPSAEEIIRSNEEEVAK 277
>SB_10203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1091
Score = 33.1 bits (72), Expect = 0.43
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 9 ESIWDTYVHEHPEYTPDKSNGDIAADSYHKFKEDVQLIKALGVKYYRLSISWPRL---LP 65
E+ WD + P+ P KS D Y + V +K +G K YRL + L LP
Sbjct: 67 ENAWDRIREKFPKMNPAKSPFTATLDEYGRV---VIKLKRMGGKSYRLFDAGGELNEKLP 123
Query: 66 NGTSNNISTDGARYYRNLFEELLK 89
+ NN+ R+ EE+ K
Sbjct: 124 SSIKNNLGPSAEEITRSNEEEVAK 147
>SB_41765| Best HMM Match : Transgly_assoc (HMM E-Value=0.49)
Length = 303
Score = 32.7 bits (71), Expect = 0.57
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 9 ESIWDTYVHEHPEYTPDKSNGDIAADSYHKFKEDVQLIKALGVKYYRLSISWPRL---LP 65
E+ WD + P+ P KS D Y + V +K +G K YRL + L LP
Sbjct: 67 ENAWDRIREKFPKMNPAKSPFTATLDEYERV---VVKLKRMGGKSYRLFDAGGELNEKLP 123
Query: 66 NGTSNNISTDGARYYRNLFEELLK 89
+ NN+ + EE+ K
Sbjct: 124 SSIKNNLGPSAEEIIHSNEEEVAK 147
>SB_12810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 546
Score = 31.9 bits (69), Expect = 1.00
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 336 LSVYPEGFRKLLNYVSDNYGREIPIIVTE 364
L +YP G K L+YV+D+ GR + +++T+
Sbjct: 453 LVLYPAGLTKCLSYVADDRGRALRLVLTK 481
>SB_51280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 186 HLYEKEFKPHQKGKVGITLDAFMGIPKDPRNFQDVLAVRSYL 227
H + E P K KV LD M PKD +N Q L + +YL
Sbjct: 110 HTWSPEGVPPDKKKVSAILD--MEAPKDTKNLQSFLGLVNYL 149
>SB_15534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1041
Score = 30.3 bits (65), Expect = 3.1
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 186 HLYEKEFKPHQKGKVGITLDAFMGIPKDPRNFQDVLAVRSYL 227
H + E P K KV LD M PKD +N Q L + +YL
Sbjct: 484 HTWSPEGVPPDKKKVSAILD--MEAPKDTKNLQSFLGLVNYL 523
>SB_41898| Best HMM Match : EGF_CA (HMM E-Value=3.9e-14)
Length = 1087
Score = 29.5 bits (63), Expect = 5.3
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 312 PSMDHDAQVRMEQDPHWEKPGTDWLSVYPEGFRKLLNYVSDNYGREI 358
P + DA ++M H D + +G R ++Y+++ YG+ I
Sbjct: 819 PGLSWDAMLKMTDIKHELMTDIDMFQIIEKGMRGGISYIANRYGKAI 865
>SB_1943| Best HMM Match : Vicilin_N (HMM E-Value=0.67)
Length = 695
Score = 29.1 bits (62), Expect = 7.0
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 219 DVLAVRSYLQIHKLHFQFDL-YAHPIFSAEG 248
D + R+YLQIH ++F D YA P+ G
Sbjct: 579 DGITFRAYLQIHNIYFYVDFSYAEPLLRKIG 609
>SB_44831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 29.1 bits (62), Expect = 7.0
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 9 ESIWDTYVHEHPEYTPDKSNGDIAADSYHKFKEDVQLIKALGVKYYRLSISWPRL---LP 65
++ WD + P+ P KS D Y + V +K +G + YRL + L LP
Sbjct: 243 DNAWDRIREKFPKMNPAKSPFTATLDEYERV---VVKLKRMGGRAYRLFDAGGELNEKLP 299
Query: 66 NGTSNNISTDGARYYRNLFEELLK 89
NN+ + EE+ K
Sbjct: 300 PSIKNNLGPSAEEIIHSNEEEVAK 323
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.140 0.447
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,025,060
Number of Sequences: 59808
Number of extensions: 730973
Number of successful extensions: 1181
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1165
Number of HSP's gapped (non-prelim): 13
length of query: 419
length of database: 16,821,457
effective HSP length: 84
effective length of query: 335
effective length of database: 11,797,585
effective search space: 3952190975
effective search space used: 3952190975
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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