Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002450-TA|BGIBMGA002450-PA|IPR001360|Glycoside
hydrolase, family 1
(419 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical ... 248 4e-66
U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical pr... 244 1e-64
AC024781-1|AAN39662.2| 367|Caenorhabditis elegans Hypothetical ... 31 1.5
U00036-9|AAK29852.1| 377|Caenorhabditis elegans Hypothetical pr... 31 2.0
AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical ... 30 3.5
AF016672-4|AAD47126.1| 968|Caenorhabditis elegans Hypothetical ... 30 3.5
Z81540-3|CAB04404.1| 281|Caenorhabditis elegans Hypothetical pr... 29 8.1
>AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical
protein E02H9.5 protein.
Length = 475
Score = 248 bits (608), Expect = 4e-66
Identities = 151/432 (34%), Positives = 230/432 (53%), Gaps = 39/432 (9%)
Query: 3 NVNGKGESIWDTYVHEHPEYTPDKSNGDIAADSYHKFKEDVQLIKALGVKYYRLSISWPR 62
++NG+G S WD + P D S+ D++ D K+KEDV L+ +GV YR SISW R
Sbjct: 27 DLNGRGFSTWDA-IRLEPGRILDNSDPDLSCDGLLKYKEDVALLAEIGVTNYRFSISWSR 85
Query: 63 LLPNGTSNNISTDGARYYRNLFEELLKANITPIVTLFHWDMPTPFMDL-RGWNNPVIVDY 121
+LP+GT + I+ +G ++YR+L L + NI P+VTLFH+DMP D W N ++
Sbjct: 86 ILPDGTLSTINEEGIKFYRDLCLLLKENNIEPVVTLFHFDMPLAIYDNGTAWLNRENCEH 145
Query: 122 FVDYARVAFNLYGDIIKTWTTINEPHQHCYQGY----GADYFA---PAIKSHGVGEYLCA 174
F +A + F +GD++KTW T NE + + G + P I++H Y A
Sbjct: 146 FEKFADLCFQKFGDLVKTWITYNEINCQAWGSIVKVEGEFWLCPERPEIENHKQAPYFGA 205
Query: 175 HYLILSHAKAYHLYEKEFKPHQKGKVGITLDAFMGIPKDPRNFQDVLAVRSYLQIHKLHF 234
++L+HAK Y Y++ +KP Q G +GIT P +D+ A +
Sbjct: 206 ANMLLTHAKIYRNYDQNYKPTQHGILGITNGGRFCFPATDSQ-EDIEACN-----RARDW 259
Query: 235 QFDLYAHPIFSAEGDYPTFVRQRINNMSLAQGFARSRLPYFTAEEVKIIRGSSDFFGLNH 294
F+ PI S GD+P +R+R+ +P F+ EE +II+GS+DF G+N+
Sbjct: 260 LFNFTIEPILSGSGDFPVLMRERM-----------PFIPKFSEEEKEIIKGSTDFIGINY 308
Query: 295 YTTYLM-SPSEMEFSWSIPSMDHDAQVRMEQDPHWEK-PGTDWLSVYPEGFRKLLNYVSD 352
Y ++L+ +P + E + S HD + + W+K G W+ P+G K+L YV +
Sbjct: 309 YLSFLVRAPKDGEKASS--QSQHDGGY-VFVEGKWDKICGETWIRYAPDGLLKILRYVKE 365
Query: 353 NYGREIPIIVTENGVGD-KGQ-----LKDYDRISYFNKYLYQLLLAIHEDNCNIIGYFAW 406
Y P+ +TENG D GQ D RI Y + +L + A+ ++ CN+IGY W
Sbjct: 366 KYA-NTPVFITENGCMDIVGQDQEDAFHDQHRIDYISGHLEAVAKAL-DEGCNVIGYTVW 423
Query: 407 TLMDDFEWSDGY 418
TLMD+FEW DG+
Sbjct: 424 TLMDNFEWDDGF 435
>U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical
protein C50F7.10 protein.
Length = 479
Score = 244 bits (596), Expect = 1e-64
Identities = 150/434 (34%), Positives = 229/434 (52%), Gaps = 40/434 (9%)
Query: 3 NVNGKGESIWDTYVHEHPEYTPDKSNGDIAADSYHKFKEDVQLIKALGVKYYRLSISWPR 62
N++G+G S WD+ E+ D S+ D++ + K+KEDV L+ +GV YR SISW R
Sbjct: 27 NLDGRGFSTWDSIRSENGRIH-DNSDPDLSCEGRLKYKEDVALLSKIGVTSYRFSISWSR 85
Query: 63 LLPNGTSNNISTDGARYYRNLFEELLKANITPIVTLFHWDMPTPFMDL-RGWNNPVIVDY 121
+LP+GT I+ DG ++YR++ L I PIVTLFH+DMP D W N ++
Sbjct: 86 ILPDGTLKTINEDGIQFYRDICLLLRDNGIEPIVTLFHFDMPLSIYDNGTSWLNKENCEH 145
Query: 122 FVDYARVAFNLYGDIIKTWTTINEPHQHCYQGY----GADYFA---PAIKSHGVGEYLCA 174
F +A + F +GD++KTW T NE + + G + P I++H Y+ A
Sbjct: 146 FEKFADLCFQKFGDLVKTWITFNEINMQAWSSVVKIEGELWLCPDRPEIENHEQAPYIAA 205
Query: 175 HYLILSHAKAYHLYEKEFKPHQKGKVGITLDAFMGIPKDPRNFQDVLAVRSYLQIHKLHF 234
++L+HAK Y Y+K +K Q G +GIT +P + D+ A L +
Sbjct: 206 TNMLLTHAKIYRNYQKNYKETQNGLIGITNGGRFCLPASD-SPADLDACN-----RALDW 259
Query: 235 QFDLYAHPIFSAEGDYPTFVRQRINNMSLAQGFARSRLPYFTAEEVKIIRGSSDFFGLNH 294
F+ PI + GD+P +R+++ LP F+ EE K+I+GS+DF G+N+
Sbjct: 260 LFNYTIEPILTDSGDFPASMREKL-----------PFLPKFSEEEKKLIKGSTDFLGINY 308
Query: 295 YTTYLMSPSEMEFSWSIPSMDHDAQVRMEQDPHWEK-PGTDWLSVYPEGFRKLLNYVSDN 353
Y ++++ + + + DA + WEK G W+ P+G LL YV D
Sbjct: 309 YLSHIVR-NLNDGEEPASQSERDAAYAFNEG-KWEKICGETWVRYAPDGLFGLLKYVRDK 366
Query: 354 YGREIPIIVTENG----VGDKGQ-----LKDYDRISYFNKYLYQLLLAIHEDNCNIIGYF 404
Y IP+ +TENG VG +G+ L D RI + + +L + A+ E+ CN+IGY
Sbjct: 367 Y-NNIPVFITENGCMDLVGGEGRKEEEILDDKHRIKFISGHLEAVAKAL-EEGCNVIGYT 424
Query: 405 AWTLMDDFEWSDGY 418
WTLMD+FEW DG+
Sbjct: 425 LWTLMDNFEWDDGF 438
>AC024781-1|AAN39662.2| 367|Caenorhabditis elegans Hypothetical
protein Y43H11AL.1 protein.
Length = 367
Score = 31.1 bits (67), Expect = 1.5
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 10/65 (15%)
Query: 204 LDAFMGIPKDPRNFQDVLAVRS--------YLQIHKLHFQFDLYAHPIFSAEGDYPTFVR 255
LD F G+P PR DVL V Y + HK +D + HP SA +F
Sbjct: 299 LDCFAGLPSPPRGMMDVLDVTESDVCGMDLYPKDHKSE-NYDDFRHPGASAMSS-QSFTH 356
Query: 256 QRINN 260
+R NN
Sbjct: 357 KRANN 361
>U00036-9|AAK29852.1| 377|Caenorhabditis elegans Hypothetical
protein R151.1 protein.
Length = 377
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 140 WTTINEPHQHCYQGYGADYFAPAIKSHGVGEYLCAHYLILSHAKAYHLYEKEFKPHQKG 198
+T +N Q + GY P +S + H L++ H+ +YHL + KP+ G
Sbjct: 42 YTAVNSTCQKHFPGYFTSSILPDERSLTIPSAFNGHALVIDHSCSYHL-QIRAKPYPPG 99
>AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical
protein F56D12.6b protein.
Length = 951
Score = 29.9 bits (64), Expect = 3.5
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 208 MGIPKDPRNFQDVLAVRSYLQIHKLHFQFDLYAHPIFSAEGDYPTFVRQRINNMSLAQGF 267
+G K P F + V S Q + H D FS D P F +N ++A G
Sbjct: 544 IGGTKAPLMFSQSMNVSSLRQPLRSHHTADGRFRTNFSESEDPPAFSVSMGHNQAMAAGI 603
Query: 268 ARSRLPYFTAEEVKII--RGSSDFFGLNHYTTYLMSPSEMEFS 308
AR+R T +++ + S+ F +T+ ++PSE S
Sbjct: 604 ARARPRSNTPTTSQMMSRKDSASSFMDPWSSTFNLAPSESNHS 646
>AF016672-4|AAD47126.1| 968|Caenorhabditis elegans Hypothetical
protein F56D12.6a protein.
Length = 968
Score = 29.9 bits (64), Expect = 3.5
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 208 MGIPKDPRNFQDVLAVRSYLQIHKLHFQFDLYAHPIFSAEGDYPTFVRQRINNMSLAQGF 267
+G K P F + V S Q + H D FS D P F +N ++A G
Sbjct: 561 IGGTKAPLMFSQSMNVSSLRQPLRSHHTADGRFRTNFSESEDPPAFSVSMGHNQAMAAGI 620
Query: 268 ARSRLPYFTAEEVKII--RGSSDFFGLNHYTTYLMSPSEMEFS 308
AR+R T +++ + S+ F +T+ ++PSE S
Sbjct: 621 ARARPRSNTPTTSQMMSRKDSASSFMDPWSSTFNLAPSESNHS 663
>Z81540-3|CAB04404.1| 281|Caenorhabditis elegans Hypothetical
protein F46B3.3 protein.
Length = 281
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/40 (25%), Positives = 23/40 (57%)
Query: 115 NPVIVDYFVDYARVAFNLYGDIIKTWTTINEPHQHCYQGY 154
+P++ YFV+Y +F+++G + + P+Q +G+
Sbjct: 205 SPILYAYFVNYCEPSFSIFGVVCGNSVKVFLPNQFITEGH 244
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.321 0.140 0.447
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,954,850
Number of Sequences: 27539
Number of extensions: 554441
Number of successful extensions: 1023
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1002
Number of HSP's gapped (non-prelim): 8
length of query: 419
length of database: 12,573,161
effective HSP length: 83
effective length of query: 336
effective length of database: 10,287,424
effective search space: 3456574464
effective search space used: 3456574464
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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