Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002449-TA|BGIBMGA002449-PA|IPR005225|Small GTP-binding
protein domain, IPR001806|Ras GTPase, IPR013753|Ras, IPR003577|Ras
small GTPase, Ras type, IPR003579|Ras small GTPase, Rab type,
IPR003578|Ras small GTPase, Rho type, IPR002041|GTP-binding nuclear
protein Ran
(204 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 177 5e-45
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 170 8e-43
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 2e-36
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 6e-35
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 142 2e-34
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 142 2e-34
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 138 3e-33
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 138 4e-33
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 134 5e-32
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 6e-32
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 133 8e-32
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 133 1e-31
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 132 2e-31
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 129 1e-30
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 126 1e-29
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 122 2e-28
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 1e-27
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 110 7e-25
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 1e-24
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 105 3e-23
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 105 3e-23
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 102 2e-22
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 97 7e-21
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 94 8e-20
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 8e-19
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 90 1e-18
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 88 5e-18
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 85 5e-17
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 82 3e-16
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 8e-15
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 74 1e-13
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 73 2e-13
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 71 7e-13
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 9e-13
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 70 2e-12
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 69 2e-12
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 4e-12
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 66 2e-11
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 66 3e-11
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 3e-11
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 63 1e-10
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 60 2e-09
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 58 5e-09
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 57 9e-09
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 54 8e-08
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 54 1e-07
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 53 2e-07
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 53 2e-07
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 52 3e-07
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 51 6e-07
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 51 6e-07
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 50 1e-06
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 50 1e-06
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 49 2e-06
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 49 3e-06
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 48 4e-06
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 48 4e-06
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 48 7e-06
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 47 1e-05
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 46 2e-05
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 46 2e-05
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 45 4e-05
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 45 4e-05
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 45 5e-05
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 40 0.001
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 39 0.003
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 37 0.010
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 37 0.010
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 37 0.013
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 37 0.013
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 37 0.013
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 36 0.018
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 36 0.018
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 36 0.023
SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.054
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 33 0.13
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_8139| Best HMM Match : Ras (HMM E-Value=0.02) 32 0.29
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 31 0.51
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 31 0.67
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 29 2.0
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_13202| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 28 4.7
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 28 4.7
SB_10932| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.7
SB_59757| Best HMM Match : Gly_radical (HMM E-Value=3.5) 28 6.2
SB_27993| Best HMM Match : zf-C5HC2 (HMM E-Value=1.5) 27 8.2
SB_7747| Best HMM Match : Alpha_L_fucos (HMM E-Value=0) 27 8.2
SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07) 27 8.2
SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.2
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 177 bits (431), Expect = 5e-45
Identities = 82/171 (47%), Positives = 118/171 (69%), Gaps = 1/171 (0%)
Query: 1 MALDFSATYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQ 60
M ++ +KLL++GDS VGK+ ++ R+ D+ + + YISTIG+DFK + + +DG IKLQ
Sbjct: 1 MNSEYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQ 60
Query: 61 IWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVG 120
IWDTA QERFRTLTTAYYR A GI+L+YD+ E+F HLS WL + EYA V +LVG
Sbjct: 61 IWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVG 120
Query: 121 NKCDVHENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIR 171
NKCD+ + R V + ++ A+ D+ F E S K++ N+E F T+A +++
Sbjct: 121 NKCDLID-CRQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTMAAELK 170
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 170 bits (413), Expect = 8e-43
Identities = 86/189 (45%), Positives = 123/189 (65%), Gaps = 22/189 (11%)
Query: 4 DFSATYKLLVLGDSNVGKTCIVHRYC---------------------DERYYDIYISTIG 42
++ +KLL++GDS VGK+C++ R+ D+ Y + YISTIG
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIG 63
Query: 43 IDFKQKIINLDGVPIKLQIWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYW 102
+DFK + I LDG IKLQIWDTA QERFRT+T++YYRGA GII++YD+T+ ESFN++ W
Sbjct: 64 VDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW 123
Query: 103 LRNIQEYASPDVIKVLVGNKCDVHENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEA 162
L+ I YA +V K+LVGNKCD+ + V ++ A+ +PF E S KN N+E+A
Sbjct: 124 LQEIDRYACENVNKLLVGNKCDL-TTKKVVDFTTAKEYAESLGVPFLETSAKNATNVEQA 182
Query: 163 FLTLARKIR 171
F+T+A +I+
Sbjct: 183 FMTMAAEIK 191
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 149 bits (360), Expect = 2e-36
Identities = 73/172 (42%), Positives = 113/172 (65%), Gaps = 6/172 (3%)
Query: 8 TYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQ 67
T+K++++GDSNVGKTC+ +R C ++ + +TIG+DF +K + L+G +KLQ+WDTA Q
Sbjct: 46 TFKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQ 105
Query: 68 ERFR-TLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYA-SPDVIKVLVGNKCDV 125
ERFR ++ YYR ++ MYDIT SF L+ W+ + +A S DV K+L+GNKCD+
Sbjct: 106 ERFRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGNKCDL 165
Query: 126 HENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEE---AFLTLARKIREYR 174
R V + +K AD +MP +E+S KN+ +E+ FLTL K+ +++
Sbjct: 166 -GLERTVSSNIARKFADSHNMPLWEISIKNDAELEQIEAIFLTLTHKLLKHK 216
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 144 bits (348), Expect = 6e-35
Identities = 70/194 (36%), Positives = 115/194 (59%), Gaps = 2/194 (1%)
Query: 8 TYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQ 67
++K+LV+GD VGKT ++ R+ + D ST+G+D +++++ G +KLQ WDTA Q
Sbjct: 11 SFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQ 70
Query: 68 ERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHE 127
E+FR +T +YYR A +IL++DITN +F + WL N+Q+Y + +++KVLVGNK D+
Sbjct: 71 EKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVGNKTDLKG 130
Query: 128 NHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIREYRETKADAFELKERD 187
R V +A+ ++ + E S K + N+E LA ++RE K FE + +
Sbjct: 131 ASRKVNTRSAANLAEFEELLYLETSAKWDDNVEVLIAELAEQLRE--NAKNRVFEESDNN 188
Query: 188 NVVKPSVSETDASK 201
+V P+ + K
Sbjct: 189 KIVSPNAGASGLIK 202
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 142 bits (343), Expect = 2e-34
Identities = 66/168 (39%), Positives = 110/168 (65%), Gaps = 3/168 (1%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQE 68
+K+LVLGD NVGK+ ++ R+ D+ + +TIG+DF +LDG +KLQ+WDTA +E
Sbjct: 11 FKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEE 70
Query: 69 RFRTLTTAYYRGAMGIILMYDITNLESFNHL-SYWLRNIQEYASPDVIKVLVGNKCDVHE 127
++R L+ +++RGA G +L++D++ ESF+ + YWL + + D I +LVGNKCD +
Sbjct: 71 KYRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCD--K 128
Query: 128 NHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIREYRE 175
+ V ++ Q ++ +++ + E S K+N N+ EAF +ARK+ E E
Sbjct: 129 KDKKVSEEDIQNLSSCYNLSWLETSAKDNTNVNEAFEAMARKLVENLE 176
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 142 bits (343), Expect = 2e-34
Identities = 65/161 (40%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQE 68
+K++ +GDS VGK+ +HR+C +++ + +TIG+DF+ K +N++G I +Q+WDTA QE
Sbjct: 897 FKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQE 956
Query: 69 RFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHEN 128
RFR++T Y+R A GI++ YD+T SF +L W+ +++E A V K+++GNK D+ E+
Sbjct: 957 RFRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVSVEEGAEEGVAKMVLGNKTDLAED 1016
Query: 129 H--RAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLA 167
R V G+ +A+ +D + E S K NI+EA LA
Sbjct: 1017 EESRVVKTIDGKNLANQYDALYMETSAKTGNNIQEAMYKLA 1057
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 138 bits (334), Expect = 3e-33
Identities = 60/117 (51%), Positives = 90/117 (76%), Gaps = 1/117 (0%)
Query: 54 GVPIKLQIWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPD 113
G IKLQIWDTA QERF T+TTAYYRGAMGI+L+YD+TN +SF+++S WL+ I ++A+ D
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANED 61
Query: 114 VIKVLVGNKCDVHENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKI 170
V ++LVGNKCD+++ R + + +G+++A + + F E S +NIN+E++F+ L I
Sbjct: 62 VKRMLVGNKCDMYDK-RVISQTKGEQLASSYGISFIETSALSNINVEKSFVVLTEDI 117
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 138 bits (333), Expect = 4e-33
Identities = 61/144 (42%), Positives = 98/144 (68%), Gaps = 1/144 (0%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQE 68
YK++++GDS VGK+ ++ R+ + STIG++F + I ++G IK Q+WDTA QE
Sbjct: 13 YKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQE 72
Query: 69 RFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHEN 128
R+R +T+AYYRGA+G +L+YD+T ++F + WL ++E+A P ++ +LVGNKCD+ ++
Sbjct: 73 RYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCDL-KH 131
Query: 129 HRAVPKDRGQKIADDFDMPFFEVS 152
RAV D +K D+ + F E S
Sbjct: 132 LRAVASDDAKKYGDEHGLAFIEAS 155
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 134 bits (324), Expect = 5e-32
Identities = 63/164 (38%), Positives = 111/164 (67%), Gaps = 3/164 (1%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDG-VPIKLQIWDTAVQ 67
++++++GDS VGK+ ++ ++ + ++++ T+G+DF +++ L G V IKLQIWDTA Q
Sbjct: 14 FRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQ 73
Query: 68 ERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQE-YASPDVIKVLVGNKCDVH 126
ERFR++T +YYR +G +++YDITN +SF ++ W + ++ +V+ +LVG+K D
Sbjct: 74 ERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHKID-K 132
Query: 127 ENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKI 170
E+ R V + G+ A+ +M F E S K NIEEAF+++A ++
Sbjct: 133 ESKRVVSTEEGECFAEAHNMMFIETSAKVLCNIEEAFISVAEEV 176
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 134 bits (323), Expect = 6e-32
Identities = 64/145 (44%), Positives = 96/145 (66%), Gaps = 6/145 (4%)
Query: 1 MALDFSATYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQ 60
M D T K+L++G+S VGK+ ++ R+ D+ + +TIG+DFK K + ++G KL
Sbjct: 1 MENDVLTTLKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLA 60
Query: 61 IWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYAS-PDVIKVLV 119
IWDTA QERFRTLT +YYRGA G+IL+YD + E+F+ L WL ++ Y++ D++K+LV
Sbjct: 61 IWDTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLV 120
Query: 120 GNKCDVHENHRAVPKDRGQKIADDF 144
GNK D H + + GQK+ D+
Sbjct: 121 GNKIDKHSSSKC-----GQKLLGDY 140
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 133 bits (322), Expect = 8e-32
Identities = 69/189 (36%), Positives = 109/189 (57%), Gaps = 6/189 (3%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQE 68
+K+++ GD+ VGK+ + R C R++ ST+G+DF+ K + +DG LQ+WDTA QE
Sbjct: 443 FKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQE 502
Query: 69 RFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVH-- 126
RFR++ +Y+R A G++L+YD+T SF + W+ I+E S V +L GNK D+
Sbjct: 503 RFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVEAIEESCSKPVPIMLCGNKIDIRQS 562
Query: 127 ---ENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIREYRETKADAFE- 182
EN + + G ++A + F E S K N NI EA + LAR +R+ + +
Sbjct: 563 AAAENKTVITAESGSRLAKEHGALFIETSSKENKNIAEACIELARMLRDVEDIEVKQNNG 622
Query: 183 LKERDNVVK 191
+K DN +K
Sbjct: 623 MKLTDNDIK 631
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 133 bits (321), Expect = 1e-31
Identities = 59/127 (46%), Positives = 86/127 (67%)
Query: 4 DFSATYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWD 63
D+S +K++++GD+NVGKTC+V ++ + TIG+DF K +++DG +KLQIWD
Sbjct: 3 DYSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWD 62
Query: 64 TAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKC 123
TA QERFR++T +YY A G+I+ YDITN +SF L WL + Y S DV+ +VGNK
Sbjct: 63 TAGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGNKS 122
Query: 124 DVHENHR 130
D+ N +
Sbjct: 123 DLSTNRK 129
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 132 bits (319), Expect = 2e-31
Identities = 62/161 (38%), Positives = 99/161 (61%), Gaps = 1/161 (0%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQE 68
+KL++LG+S VGK+ +V R+ ++++ STIG F + + LD +K +IWDTA QE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 69 RFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHEN 128
R+ +L YYRGA I++YDITN ++F W++ +Q ASP+++ L GNK D+ +
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADL-AS 140
Query: 129 HRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARK 169
R V + Q A+D + F E S K +N+ + FL + +K
Sbjct: 141 KRMVEYEDAQSYAEDNGLLFMETSAKTAMNVNDIFLAIGKK 181
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 129 bits (312), Expect = 1e-30
Identities = 61/125 (48%), Positives = 86/125 (68%), Gaps = 2/125 (1%)
Query: 37 YISTIGIDFKQKIINLDGVPIKLQIWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESF 96
YI+TIG+DFK + IN+DG +KLQIWDTA QERFRT+T+ YYRG G+I++YD+T+ ++F
Sbjct: 6 YITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTF 65
Query: 97 NHLSYWLRNIQEYASPDVIKVLVGNKCDVHENHRAVPKDRGQKIADDFDMPFFEVSCKNN 156
++ WL I + DVI++LVGNK D + + V QK + ++ FE S K N
Sbjct: 66 VNVKRWLHEIDQNCD-DVIRILVGNKDDC-PSKKVVETADLQKFGEQMNIRVFETSAKEN 123
Query: 157 INIEE 161
IN+EE
Sbjct: 124 INVEE 128
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 126 bits (304), Expect = 1e-29
Identities = 60/131 (45%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
Query: 40 TIGIDFKQKIINLDGVPIKLQIWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHL 99
TIG++F KI+N+ G +KLQIWDTA QERFR++T +YYRGA G +L+YDI++ E+FN L
Sbjct: 127 TIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSL 186
Query: 100 SYWLRNIQEYASPDVIKVLVGNKCDVHENHRAVPKDRGQKIADDFDMPFFEVSCKNNINI 159
+ WL + + ASP+++ +LVGNK D+ + R V + A + ++ F E S N+
Sbjct: 187 TNWLTDARTLASPNIVIILVGNKKDL-DADREVTFLEASRFAQENELMFLETSALTGENV 245
Query: 160 EEAFLTLARKI 170
EE FL +R I
Sbjct: 246 EEGFLKCSRTI 256
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 122 bits (294), Expect = 2e-28
Identities = 55/93 (59%), Positives = 71/93 (76%)
Query: 4 DFSATYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWD 63
+F +KLL++G+S VGKT + RY D+ + ++ST+GIDFK K + + +KLQIWD
Sbjct: 17 NFDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWD 76
Query: 64 TAVQERFRTLTTAYYRGAMGIILMYDITNLESF 96
TA QER+RT+TTAYYRGAMG ILMYDITN ESF
Sbjct: 77 TAGQERYRTITTAYYRGAMGFILMYDITNEESF 109
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 119 bits (287), Expect = 1e-27
Identities = 58/169 (34%), Positives = 97/169 (57%), Gaps = 1/169 (0%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQE 68
+K++ LGD VGK+ + R+ + + + Y TIGIDF K + LD ++LQIWDTA QE
Sbjct: 164 HKIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQE 223
Query: 69 RFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHEN 128
RFR L +Y R + ++++DITN SF + W++ +++ + ++VGNK D +
Sbjct: 224 RFRCLIHSYIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGEKAVIIIVGNKMD-ESD 282
Query: 129 HRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIREYRETK 177
R V D +K A+ + + E S K+ N++ F L++ + Y T+
Sbjct: 283 RRKVSYDVAEKSAERLGLSYVETSAKSGYNVKLLFTKLSKDLYLYHFTR 331
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 110 bits (265), Expect = 7e-25
Identities = 61/147 (41%), Positives = 90/147 (61%), Gaps = 8/147 (5%)
Query: 62 WDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGN 121
W+ A QERFRT+T++YYRGA G++++YDIT ES+N+L WL ++ YAS V +LVGN
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGN 432
Query: 122 KCDVHENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIREY---RETKA 178
K D+ + R V D Q+ A DMPF E S K N++EAFL L+R + ++ E +
Sbjct: 433 KIDL-DTDREVQPDAAQEWAALHDMPFVETSAKGAKNVKEAFLVLSRLLTKHIASNEARR 491
Query: 179 DAFELKERDNVVKPSVSE-TDASKCIC 204
+ +++ V E T+ +KC C
Sbjct: 492 KGLVIGANGEILE--VEECTENNKCSC 516
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 109 bits (263), Expect = 1e-24
Identities = 61/192 (31%), Positives = 102/192 (53%), Gaps = 7/192 (3%)
Query: 16 DSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQERFRTLTT 75
D VGK+ +++R+ ++ TIG++F K + LDG LQIWDTA QERF++L T
Sbjct: 219 DGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKSLRT 278
Query: 76 AYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYA----SPDVIKVLVGNKCDVHENHRA 131
+YRG+ +L+Y + + +SF +LS W + YA + +L+GNK DV RA
Sbjct: 279 PFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVDV--EGRA 336
Query: 132 VPKDRGQK-IADDFDMPFFEVSCKNNINIEEAFLTLARKIREYRETKADAFELKERDNVV 190
V ++ + +P+FE S K++ N+ +AF+ +++ + KA+ V
Sbjct: 337 VSQEEADSWCRQNGGVPYFETSAKDSTNVNDAFIAAVKRLNSLEQNKANRSGFTATGGVN 396
Query: 191 KPSVSETDASKC 202
+V + S C
Sbjct: 397 LANVKKDKGSGC 408
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 105 bits (252), Expect = 3e-23
Identities = 59/184 (32%), Positives = 100/184 (54%), Gaps = 6/184 (3%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQE 68
+K+++LG++ VGKT + +R + + +TIGID K + + + L +WDTA E
Sbjct: 12 FKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVE 71
Query: 69 RFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHEN 128
RFRT+T YYRGA ILM+++ + S +L +W+ + E+ PD +KVLV NK D+ E
Sbjct: 72 RFRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDEFC-PDALKVLVANKIDLDEQ 130
Query: 129 HRAVPKDRGQKIADDFDMPF-FEVSCKNNINIEEAFLTLARK-IREYRETKADAFELKER 186
V + + A + F +S K I +A +A+ +RE +E + D+ +
Sbjct: 131 ---VTTESVELFASSHECHLTFRISAKTGEGIGKACTQIAKALLRENKELEDDSHNESSK 187
Query: 187 DNVV 190
+ +
Sbjct: 188 SDTI 191
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 105 bits (252), Expect = 3e-23
Identities = 53/116 (45%), Positives = 74/116 (63%), Gaps = 2/116 (1%)
Query: 57 IKLQIWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIK 116
+KLQIWDTA QERFRT+T +YYR G+I+ YDIT ++F ++ W ++Q+YA + IK
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIK 154
Query: 117 VLVGNKCDVHENHRAVPKDRGQKIADDFDM-PFFEVSCKNNINIEEAFLTLARKIR 171
+LVGNK D+ E R V + A + M E S K+ NIE AF LAR+++
Sbjct: 155 LLVGNKKDL-EREREVSLEDAVNCASHYGMLDVLETSAKDATNIEAAFYRLARELK 209
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 103 bits (246), Expect = 1e-22
Identities = 44/94 (46%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Query: 82 MGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHENHRAVPKDRGQKIA 141
+GI+L+YDIT +SF H+S WL+NI++ ASP+V KVL+GNK D E+ R + RG+ +
Sbjct: 3 LGILLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLGNKLDA-EDERVIDAQRGRSVG 61
Query: 142 DDFDMPFFEVSCKNNINIEEAFLTLARKIREYRE 175
+D ++ F+E S + N+++AF+ +ARKI+E RE
Sbjct: 62 EDNNLEFYEASARTGENVQQAFMAVARKIKEQRE 95
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 102 bits (244), Expect = 2e-22
Identities = 53/119 (44%), Positives = 79/119 (66%), Gaps = 14/119 (11%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKII-----NLDGVP------IK 58
K L LGDS VGKT ++++Y D + ++ TIGIDF++K + N DG I
Sbjct: 108 KFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRIH 167
Query: 59 LQIWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYA---SPDV 114
LQ+WDTA QERFR+LTTA++R AMG +L++D+T+ +SF ++ WL +Q +A +PD+
Sbjct: 168 LQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHAYCENPDI 226
Score = 33.9 bits (74), Expect = 0.095
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 117 VLVGNKCDVHENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIREYRET 176
VL+GNK D+ E+ R V + + +AD+ + +FE S N+ ++ L ++ E
Sbjct: 470 VLLGNKADL-EDDRVVDEAEARALADNLGLKYFETSAATGQNVTKSVEALLDQVMVRMEN 528
Query: 177 KAD 179
D
Sbjct: 529 CVD 531
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 97.5 bits (232), Expect = 7e-21
Identities = 48/102 (47%), Positives = 75/102 (73%), Gaps = 2/102 (1%)
Query: 81 AMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHENHRAVPKDRGQKI 140
A GI+L+YDIT ++F+++S WLRNI+E+A+ DV K+++GNKCD+ ++ R V ++RG++I
Sbjct: 125 AEGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDM-DDRRIVSRERGEQI 183
Query: 141 ADDFDMPFFEVSCKNNINIEEAFLTLARKIREYRETKADAFE 182
A + + F E S K NINIE+AF LA+ I + +E D+ E
Sbjct: 184 AREHGIRFLETSAKTNINIEQAFQYLAQDILK-KELNKDSEE 224
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTI 41
+KLL++GDS VGKTCI+ R+ D+ + +ISTI
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 93.9 bits (223), Expect = 8e-20
Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 4/159 (2%)
Query: 12 LVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQERFR 71
L +GD GKT V R+ + YI+T+G++ I PIK +WDTA QE+F
Sbjct: 36 LQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFG 95
Query: 72 TLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHENHRA 131
L YY I+M+D+T+ ++ ++ W R++ E ++ VL GNK D+ + R
Sbjct: 96 GLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDL-ERVCENIPIVLCGNKVDIKD--RK 152
Query: 132 VPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKI 170
V K + ++ ++++S K+N N E+ FL LARK+
Sbjct: 153 V-KAKAITFHRKKNLQYYDLSAKSNYNFEKPFLWLARKL 190
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 90.6 bits (215), Expect = 8e-19
Identities = 54/178 (30%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 1 MALDFSATYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIIN-LDGVPIKL 59
M ++ +K+LV+GD GK V RY + ++ +Y TIG+DF K I I+L
Sbjct: 11 MLNQYTRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRL 70
Query: 60 QIWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQE----YASPDVI 115
QIW A QERF ++T YY+GA ++++D+ + + W +++ ++ V
Sbjct: 71 QIWLIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVP 130
Query: 116 KVLVGNKCDVHENHRAVPKDRGQKIADDFD-MPFFEVSCKNNINIEEAFLTLARKIRE 172
+LVGNK D+ + R V K+ K+ + + + E+S K +IN+++ L + + E
Sbjct: 131 CILVGNKSDLPD--RPVDKEIIDKLCKEHSFLCWTEMSVKEDINVKKPMEYLVKHLME 186
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 89.8 bits (213), Expect = 1e-18
Identities = 41/97 (42%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 67 QERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVH 126
QER+R +T+AYYRGAMG +L+YDI SF +L+ W+ ++++AS D+ +L+GNK D+
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDL- 60
Query: 127 ENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAF 163
++ R + RG++ A + M F E S ++ N+ EAF
Sbjct: 61 KHLRMIENRRGKQFAAEHGMLFMETSALDSTNVAEAF 97
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 87.8 bits (208), Expect = 5e-18
Identities = 54/159 (33%), Positives = 89/159 (55%), Gaps = 5/159 (3%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYI-STIGI-DFKQKIINLDGVPIKLQIWDTAV 66
+K L++G+S VGK+C+V++ + + ++ ST+ + D + D IKL I DTA
Sbjct: 351 FKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTAG 410
Query: 67 QERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYW--LRNIQEYASPDVIKVLVGNKCD 124
QER+ ++ AY+RG G+ L++DIT +F L W L A ++ +LVGNK D
Sbjct: 411 QERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQLILVGNKKD 470
Query: 125 VHENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAF 163
+ +N RAV R ++ A P+ E S K+ ++ + F
Sbjct: 471 MEDN-RAVTYSRAKEFAAMNGFPYIETSAKDVDSLMDMF 508
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 84.6 bits (200), Expect = 5e-17
Identities = 43/106 (40%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 58 KLQIWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKV 117
K IWDTA QERF++L YYR A IL+YDIT +F+ L W+R +Q Y D++
Sbjct: 10 KFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQRYGPQDIVIA 69
Query: 118 LVGNKCDVHENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAF 163
+ GNKCD + R V Q A D F E S + N+ F
Sbjct: 70 VAGNKCD-KADQRDVQVQDAQDFAGSVDAIFAETSALTSKNVHWLF 114
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 82.2 bits (194), Expect = 3e-16
Identities = 50/113 (44%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
Query: 61 IWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASP----DVIK 116
IWDTA QERF++L A+YRGA +L++D+T SF L W ASP +
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 117 VLVGNKCDVHENHRAVPKDRGQK-IADDFDMPFFEVSCKNNINIEEAFLTLAR 168
V++GNK D+ EN RAV R Q D+P+FE S K IN+E+AF T+A+
Sbjct: 61 VVLGNKIDL-EN-RAVSAKRAQAWCHSKNDIPYFETSAKEAINVEQAFQTIAK 111
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 77.4 bits (182), Expect = 8e-15
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQE 68
Y L++LG + VGK+ ++ R+C R+ Y T+ + + +D P L I DTA
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVS-ATIDEDPATLHITDTA--- 183
Query: 69 RFRTLTTAYYRGAMGIILMYDITNLESF---NHLSYWLRNIQEYASPDVIKVLVGNKCDV 125
T Y G I++Y I L +F L +R I++ + + VL GNKCD+
Sbjct: 184 --STYEPVYLSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDL 241
Query: 126 HENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIR 171
++ RAV + ++ A + + F E S NNIN + F R+IR
Sbjct: 242 -KHCRAVSRQEAREFAAEHECVFHETSAANNINTKVIFHDCVRQIR 286
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 73.7 bits (173), Expect = 1e-13
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 58 KLQIWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYA-SPDVIK 116
K I DTA QE + + Y R G + ++ + N +SF ++ + I+ + +V
Sbjct: 278 KTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDINQYREQIKRVKDAEEVPM 337
Query: 117 VLVGNKCDVHENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIRE 172
VLVGNKCD+ + R V Q++A +++PF E S K +++AF TL R+IR+
Sbjct: 338 VLVGNKCDLPQ--RTVSTSDAQELAKSYNIPFQETSAKTRQGVDDAFYTLVREIRK 391
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 72.5 bits (170), Expect = 2e-13
Identities = 52/174 (29%), Positives = 84/174 (48%), Gaps = 10/174 (5%)
Query: 8 TYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQ 67
T KL ++GD VGKT + + YI T +Q N+DG+ + ++D+A
Sbjct: 6 TLKLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGG 65
Query: 68 ERFRTLTTAYYRGAMGIILMYDITNLESFNHLSY-WLRNIQEYASPDVIKVLVGNKCDV- 125
E F L Y ++ +DI + SF +++ WL + + SP V +VLVGNK D+
Sbjct: 66 EDFDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPELDHF-SPGVPRVLVGNKKDLR 124
Query: 126 -----HENHRA--VPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIRE 172
++H V + G++ A +F M + E S N N++E T R R+
Sbjct: 125 PKQDQEDSHSIDFVSYEEGKEAAQNFKMQYIENSALLNENVKEVITTSIRIARD 178
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/71 (45%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Query: 67 QERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVH 126
QER+R +T+AYYRGAMG +L+YDI SF +L+ W+ ++++AS D+ +L+GNK D+
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDL- 60
Query: 127 ENHRAVPKDRG 137
++ R + RG
Sbjct: 61 KHLRMIENRRG 71
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 70.9 bits (166), Expect = 7e-13
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQE 68
YK++VLG VGK+ + ++ ++ + Y TI DF +K I +D P L+I DTA E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DFYRKEIEVDNNPSILEILDTAGTE 62
Query: 69 RFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNI-QEYASPDVIKVLVGNKCDVHE 127
+F ++ Y + G +L+Y + N ++F L I + S +V VLVGNK D+++
Sbjct: 63 QFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYD 122
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 70.5 bits (165), Expect = 9e-13
Identities = 48/181 (26%), Positives = 89/181 (49%), Gaps = 15/181 (8%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQER 69
KL+++GD GKTC++ + +++ ++Y+ T+ ++ I +DG ++L +WDTA QE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 5989
Query: 70 FRTLTTAYYRGAMGIILMYDITNLESFNHL-SYWLRNIQEYASPDVIKVLVGNKCDVH-- 126
+ L Y I++ + I + +S ++ W ++ + P+V +LVGNK D+
Sbjct: 5990 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRMD 6048
Query: 127 EN---------HRAVPKDRGQKIADDFD-MPFFEVSCKNNINIEEAFLTLARKIREYRET 176
EN V + G+ +AD + E S K + E F T R + ++
Sbjct: 6049 ENTKRELQKMKQEPVKIEEGRAMADKISAYAYLECSAKTKDGVREVFETATRAALQTKKK 6108
Query: 177 K 177
K
Sbjct: 6109 K 6109
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/62 (51%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 78 YRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHENHRAVPKDRG 137
Y GI+L+YDITN +SF W+RNI+E+AS DV K+++GNKCD+ E+ R V K+RG
Sbjct: 82 YEDDKGIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCDM-EDRRQVSKERG 140
Query: 138 QK 139
++
Sbjct: 141 EQ 142
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 69.3 bits (162), Expect = 2e-12
Identities = 42/116 (36%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 77 YYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIK-VLVGNKCDVHENHRAVPKD 135
Y R G I++Y IT+ SFN + + I+ D I VLVGNK D+ E R V
Sbjct: 5 YMRNGEGFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDL-EGKREVTTQ 63
Query: 136 RGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIREYRETKADAFELKERDNVVK 191
GQ++A FD PFFE S +++AF L R+IR+ + + +E+ +VK
Sbjct: 64 EGQELAHRFDCPFFETSACQRHFVDDAFHGLVREIRKKEKQRLTGHFQEEKKGLVK 119
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 68.5 bits (160), Expect = 4e-12
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 4 DFSATYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWD 63
+ T K++ +GD NVGKT ++ + +I++I D K + +DG + + D
Sbjct: 5 ELDPTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGKRYTVLLCD 63
Query: 64 TAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHL-SYWLRNIQEYASPDVIKVLVGNK 122
T R +++ A +L +DI N ESF ++ S WL ++ S DV KVLVGNK
Sbjct: 64 TPGTMHPRIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHVNLETS-DVPKVLVGNK 122
Query: 123 ----C------DVHENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIRE 172
C D+ + H VP + +A ++P+ E S K +E+ +T R+
Sbjct: 123 MELRCSQQESTDLGQTHDCVPFTEAKALACKSNIPYVENSAKELKGLEDVLMTGIEIGRD 182
Query: 173 YRETKADAFELKERDNV-VKP 192
Y + D + R + +KP
Sbjct: 183 YIMSTQDQTKTHTRLQITIKP 203
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 66.1 bits (154), Expect = 2e-11
Identities = 45/164 (27%), Positives = 80/164 (48%), Gaps = 19/164 (11%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQE 68
YK++VLG VGK+ + ++ ++ + Y TI DF + TA E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DF----------------YHTAGTE 46
Query: 69 RFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEY-ASPDVIKVLVGNKCDVHE 127
+F ++ Y + G +L+Y + N ++F L I S +V VLVGNK D+++
Sbjct: 47 QFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYD 106
Query: 128 NHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIR 171
R V + +A+ + PF+E S K N+++ F + R+++
Sbjct: 107 E-REVSVGEAKDLAEAWGCPFYETSAKTRSNVDKVFAEVVRRMK 149
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 65.7 bits (153), Expect = 3e-11
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 3/139 (2%)
Query: 4 DFSATYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWD 63
D YKL+V+G VGK+ + ++ + Y TI ++++ + +D L I D
Sbjct: 7 DVDKQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCV-IDERVAHLDILD 65
Query: 64 TAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYAS-PDVIKVLVGNK 122
TA QE F + Y R G +L++ +T+ SF ++ + I + ++ GNK
Sbjct: 66 TAGQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICGNK 125
Query: 123 CDVHENHRAVPKDRGQKIA 141
D+ E R V GQ++A
Sbjct: 126 SDL-EYERTVSTAEGQELA 143
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 65.3 bits (152), Expect = 3e-11
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINL-DGVP----IKLQIWDT 64
++ V+GDS VGKT +VH C E TIG + K+ + +G+P L+ WD
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDI 67
Query: 65 AVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDV 114
+ +Y G G+IL++D+TN +SF +L WL + AS D+
Sbjct: 68 GGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEVLN-ASKDL 116
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 63.3 bits (147), Expect = 1e-10
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQER 69
KL+V+GD VGK+ + + YI T+ ++ I+ LDG + +WDTA QE
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIM-LDGKAYNVGLWDTAGQED 65
Query: 70 FRTLTTAYYRGAMGIILMYDITNLESFNHL-SYWLRNIQEYASPDVIKVLVGNKCDVH-- 126
+ L Y ++ +DI + SF ++ S WL + + P+ K+LVGNK D+
Sbjct: 66 YDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHH-MPETPKILVGNKRDLRSA 124
Query: 127 ------ENHRA---VPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLAR 168
NHR+ + + G+ +A M + E S +++ R
Sbjct: 125 QQNTSLSNHRSRDPITYEEGKALAKRLGMQYLENSSLTQDGVKDVMSAAIR 175
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 63.3 bits (147), Expect = 1e-10
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 44 DFKQKIINLDGVPIKLQIWDTAVQERF-----RTLTTAYYRGAMGIILMYDITNLESFNH 98
DF +++ L G + L I DT + R + YR G ++++D+T+ +SF
Sbjct: 5 DFFERL-ELRGKTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFER 63
Query: 99 LSYWLRNIQEYASPDVIKVLVGNKCDVHENHRAVPKDRGQKIADDFDMPFFEVSCKNNIN 158
+ WL +QE+ ++ VLVGNK D N +P + K A + + E S N
Sbjct: 64 VPTWLDKVQEHCGHEIPVVLVGNKTDRPLNSWKIPSNVAAKYATNNGFLYIETSALGMCN 123
Query: 159 IEEAFLTLARKIREYRE 175
I+E F L + + E
Sbjct: 124 IDEIFAILLELLMQQAE 140
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/66 (37%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 77 YYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHENHRAVPKDR 136
YYRGA+G +L+YDI ++ ++ WL+ ++++A +++ +LVGNK D+ + RAVP D
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDL-RHLRAVPTDE 60
Query: 137 GQKIAD 142
+ A+
Sbjct: 61 AKAFAE 66
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 58.0 bits (134), Expect = 5e-09
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERY--YDIY------ISTIGIDFKQKIINLDGVPIKLQI 61
KL V+GD+NVGKTCI++R+ E D+Y I + F + D V +
Sbjct: 10 KLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTN-FSYDRVNYIVTY 68
Query: 62 WDTAVQERFRTLTTA-----YYRGAMGIILMYDITNLESFNHLS-YWLRNIQEYASPDVI 115
WDT R L + YR I+ +DITN SF ++S W+ ++ Y P+
Sbjct: 69 WDTCTLARTEELDLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPELKHY-MPETP 127
Query: 116 KVLVGNKCDVHENHRAV 132
++VGNK D+ N RA+
Sbjct: 128 VLVVGNKKDMRTNTRAL 144
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 57.2 bits (132), Expect = 9e-09
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 73 LTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHENHRAV 132
++TA R GI+L+YDIT +SF++L +WL +I++ +LVGNKCDV ++ R V
Sbjct: 48 VSTAQGRKGWGILLVYDITCRKSFDNLQFWLESIRKNKLQYEEILLVGNKCDVGDD-REV 106
Query: 133 PKDRGQK 139
PK +G++
Sbjct: 107 PKRKGEE 113
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 8 TYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQ 67
T K +V+GD VGKTC++ Y ++ Y+ T+ D + + G P L ++DTA Q
Sbjct: 3 TIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQ 61
Query: 68 ERFRTLTTAYYRGAMGIILMYDITNLESFNHL-SYWLRNIQEYASPDVIKVLVGNKCDVH 126
E + L Y ++ + + + SF ++ W+ I + P +LVG + D+
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQVDLR 120
Query: 127 ENHRAVPK 134
++ + K
Sbjct: 121 DDQGTIEK 128
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 56.0 bits (129), Expect = 2e-08
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 3 LDFSATYKLLVLGDSNVGKTCIVHRYC--DERYYDIYISTIGIDFKQKIINLDGVPIKLQ 60
+D ++++LGDS VGKTC++ + C ++ +I ++ II +DG KL+
Sbjct: 13 IDIERNIRIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVANII-VDGKVYKLE 71
Query: 61 IWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHL-SYWLRNIQEYASPDVIKVLV 119
+ D + T + + L + + +++SF H+ + W ++ SP+ ++V
Sbjct: 72 LCDV---DNLDTKISKPFSDTDVFCLCFSVGDMDSFRHVENKWYAEVKN-CSPNSPIIVV 127
Query: 120 GNKCDVHENHRAVPKDRGQKIADDFDMPFFEVSCK 154
G K D+ EN K RG+K D D P VS K
Sbjct: 128 GTKTDLRENEN---KKRGKK---DDDSPTAIVSVK 156
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 54.0 bits (124), Expect = 8e-08
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 106 IQEYASPDVIKVLVGNKCDVHENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAF 163
++ Y+ + +LVGNKCD+ E R V DRG+++AD + F+E S K+N N+++ F
Sbjct: 5 VKTYSWANAQVILVGNKCDMEEE-RVVSYDRGKQLADQLGLEFYETSAKDNTNVKKVF 61
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 53.6 bits (123), Expect = 1e-07
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 77 YYRGAMGIILMYDITNLESFNHLSYWLRNI-QEYASP----DVIKVLVGNKCDVHENHRA 131
+Y+ G +L+YD+T+ ESF L WL I ++ SP V+ V+ NK D R
Sbjct: 10 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVD--SRKRL 67
Query: 132 VPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTL 166
V + G++ A++ +FE S + I E F TL
Sbjct: 68 VEESEGRQWAENHKFCYFETSAQTGDGIPEVFQTL 102
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/120 (27%), Positives = 54/120 (45%)
Query: 6 SATYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTA 65
+A ++++VLG VGKT +V R+ + + Y T+G +++ + L+I DTA
Sbjct: 105 AAVFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTA 164
Query: 66 VQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDV 125
F + + A +L+Y + S R I V VLVGNK D+
Sbjct: 165 GSYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVLVGNKTDL 224
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 4 DFSATYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWD 63
++ +K++++GDS VGK+ ++ R+ + STIG++F + I +DG IK QIWD
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 66
Query: 64 T 64
T
Sbjct: 67 T 67
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQER 69
K+++ GD+NVGKT + + + + + L +WDT
Sbjct: 8 KVVLTGDNNVGKTSFLINLTQNELEGTPTAFANYELG---LEVGSQKFLLDLWDTEGTTE 64
Query: 70 FRTLTTAYYRGAMGIILMYDITNLESFNHL-SYWLRNIQEYASPDVIKVLVGNKCDVHEN 128
+ L Y+G+ I+L +DI+N ++F + S WL + P I+VL+GNK D+ +
Sbjct: 65 YDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQ-VLPGSIRVLIGNKNDIRKT 123
Query: 129 HRAVPKDRGQKI 140
+ KDR K+
Sbjct: 124 RQ--DKDRRGKV 133
Score = 27.9 bits (59), Expect = 6.2
Identities = 16/68 (23%), Positives = 28/68 (41%)
Query: 102 WLRNIQEYASPDVIKVLVGNKCDVHENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEE 161
WL N E + + L G + + V + +A +D+P+ E S + I+E
Sbjct: 230 WLTNGAEISWKMPGRYLTGKEIQDAKKDSIVTAKEAKLLAKKYDLPYMETSALSRHAIQE 289
Query: 162 AFLTLARK 169
A +K
Sbjct: 290 ALYACVKK 297
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 95 SFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHENHRAVPKDRGQKIADDFDMPFFEVSCK 154
SF S W+ +++ DVI +LVGNK D+ + R V + G++ A + ++ F E S K
Sbjct: 13 SFQQTSKWIDDVRTERGNDVIIMLVGNKTDLSDK-RQVTAEEGERKAKELNVMFIETSAK 71
Query: 155 NNINIEEAFLTLARKIREYRET-----KADAFELKERDNVVKP 192
N+++ F +A + T K D E+K +D +P
Sbjct: 72 AGYNVKQLFRRVAAALPGMESTTEKTNKEDLIEVKLKDTPQEP 114
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 51.2 bits (117), Expect = 6e-07
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQER 69
+L ++G GKT V+ ++ + I T+G F + ++ V IK +WD Q R
Sbjct: 22 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVSKGNVTIK--VWDIGGQPR 77
Query: 70 FRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLV-GNKCDVHE- 127
FR++ Y RG I+ M D + + L N+ E I +LV GNK D+
Sbjct: 78 FRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIPILVLGNKKDLPNS 137
Query: 128 -NHRAVPKDRGQKIADDFDMPFFEVSCKNNINI 159
+ + + + D ++ + +SCK NI
Sbjct: 138 LDEKELVERLNLTSVQDREICCYSISCKEKDNI 170
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 51.2 bits (117), Expect = 6e-07
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQ- 67
Y++ +LGD VGKT ++ R+ R+ Y TI D +K IN+D V + L+I DTA +
Sbjct: 6 YRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIE-DKYRKSINIDDVTVTLEILDTASRG 64
Query: 68 ERFRTLTTAYYRGAMGIILMYDITNLESFNHL 99
+ L + R G I++Y + +F +L
Sbjct: 65 QNSCKLRDQFVREGDGFIVVYSTADRSTFANL 96
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 50.8 bits (116), Expect = 8e-07
Identities = 19/62 (30%), Positives = 40/62 (64%)
Query: 4 DFSATYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWD 63
++ +K++++GDS VGK+ ++ RY ++ +TIG++ + + ++G ++ QIWD
Sbjct: 14 NYDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWD 73
Query: 64 TA 65
TA
Sbjct: 74 TA 75
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/125 (24%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 11 LLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQERF 70
++++GDS GKT +++ Y ++ + Y +T+ + + +DG I+L +WDT+ E +
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATV-FNSLSTAVEVDGERIELTLWDTSGHEDY 293
Query: 71 RTLTTAYYRGAMGIILMYDITNLESFNH-LSYWLRNIQEYASPDVIKVLVGNKCDVHENH 129
+ Y +++ +DI+ ++ + L W+ + + P+ +LVG K D+
Sbjct: 294 DHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLC-PNKPVLLVGCKQDLRSEV 352
Query: 130 RAVPK 134
V K
Sbjct: 353 NIVSK 357
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 50.4 bits (115), Expect = 1e-06
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 3/122 (2%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQER 69
K +++GD VGKT ++ Y + + + Y+ T D + ++ ++ DTA QE
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPT-AFDTYHVTVEVNKKLCMIEFCDTAGQED 78
Query: 70 FRTLTTAYYRGAMGIILMYDITNLESF-NHLSYWLRNIQEYASPDVIKVLVGNKCDVHEN 128
F L Y A I+ + + + SF N S W+ I+E+ P +LVG D+ +
Sbjct: 79 FDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREF-QPKAPIILVGTHSDLKDC 137
Query: 129 HR 130
++
Sbjct: 138 YK 139
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/51 (50%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
Query: 117 VLVGNKCDVHENHRAVPKDRGQKIADDF-DMPFFEVSCKNNINIEEAFLTL 166
VLVGNKCD+ E+ R V KD+GQ +A F + F E S K IN+ E F L
Sbjct: 2 VLVGNKCDL-EDERVVGKDQGQNLAKQFANCTFLETSAKAKINVNEIFYDL 51
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 48.8 bits (111), Expect = 3e-06
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQE 68
+ ++ G S+VGKT ++ R+ + D Y TI DF K + + +LQI DT+
Sbjct: 29 FTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIE-DFFIKHVFFNNETYELQIIDTSGTY 87
Query: 69 RFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVH-E 127
F + +L+Y + ESF L+ + I E ++V NK D+
Sbjct: 88 EFPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGGKNRHPCIVVCNKNDLPLA 147
Query: 128 NHRAVPKD-RGQKIA------DDFDMPFFEVSCKNNINIEEAFLTLARKIR 171
H V D RG +I+ ++ + + S K N +E+ FL L +++
Sbjct: 148 THLGVLTDHRGLRISAQHLVQTEWQSLWIDCSAKENSQVEDIFLRLMDEMK 198
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 48.4 bits (110), Expect = 4e-06
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 77 YYRGAMGIILMYDITNLESFNHLSYW---LRNIQEYASPDVI-KVLVGNKCD-VHENHRA 131
YY+ A+G +++D+T +F+ + W L N + S + I VL+ NKCD E
Sbjct: 710 YYKEAVGAFIVFDVTRASTFSAVQKWKNDLDNKLQLPSGEPIPAVLLANKCDQAKEGLVN 769
Query: 132 VPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKI-REYRETKADAFELKERDNVV 190
+ AD + +FE S K ++N+ EA L KI + +E DA K+ + +
Sbjct: 770 NSAQMDEYCADKGFIGWFETSAKEDVNVNEAAKFLVSKILQNEKENNFDALP-KDPETLT 828
Query: 191 KPSVSETDAS 200
S S S
Sbjct: 829 LSSTSTASQS 838
Score = 32.3 bits (70), Expect = 0.29
Identities = 13/36 (36%), Positives = 23/36 (63%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGID 44
+K+LV+GD VGKT ++ RY + + Y +T+ +
Sbjct: 672 FKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATVSFN 707
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 48.4 bits (110), Expect = 4e-06
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 10/178 (5%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQE 68
YK+ +LG VGKT ++ + ++ + ++ T+ D+ +N+DGV I DTA
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMDGVYYSTCIVDTAGTY 71
Query: 69 RFRTLTTAYYRGAMGIILMYDITNLESFN---HLSYWLRNIQEYASPDVIKV---LVGNK 122
F + I+++ I + SF + + +I+ A + K+ LV NK
Sbjct: 72 AFPVMRRLAIHTCQAFIVVFAINSESSFREAFEIIDEIYSIKVKAGSEAKKIILNLVANK 131
Query: 123 CDVHENHRAVPKDRGQKIADD---FDMPFFEVSCKNNINIEEAFLTLARKIREYRETK 177
D+ R + R + E+S N +E F ++ + I E E K
Sbjct: 132 LDIDCRERVITAARAHAELSKRSWLTGEYMEISSMLNFRVERTFHSIVKLIVEDFEEK 189
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 47.6 bits (108), Expect = 7e-06
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 106 IQEYASPDVIKVLVGNKCDVHENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLT 165
+Q + VLVGNKC + + R V G+ +A + +PFFE S + NIN+ + F
Sbjct: 1 MQHNCEQEAKAVLVGNKCHL-DCEREVSVAEGRGLAKELGLPFFETSAEKNINVTDCFEA 59
Query: 166 LARKIREYRETKADAFELKE-----RDNVVKPSVSETDASKC 202
L I E + K + F+ E D +V + E +A C
Sbjct: 60 LVDSILEEIKQK-EIFKSIEGIMLPNDKIVVQNRHEVEACSC 100
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 47.2 bits (107), Expect = 1e-05
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGID-FKQKIINLDGVPIKLQIWDTAVQ 67
YK+ + G VGKT I R + + + S ID ++ + +K+ +WDT
Sbjct: 9 YKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLGM 68
Query: 68 ERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHE 127
E + +LT +Y + ++++Y + +S + ++ Q A P VLV NK D+
Sbjct: 69 EEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNA-PAAKIVLVANKMDL-P 126
Query: 128 NHRAVPKD 135
N+R + D
Sbjct: 127 NYRRLETD 134
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 54 GVPIKLQIWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPD 113
G+ + + + DTA +E++ L++ Y RGA I+ YDIT S L+ ++ + A P+
Sbjct: 270 GINVTISM-DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLNDRHLHLLQAAEPN 328
Query: 114 VIKVLVGNKCD-VHENHRAVPKDRGQKIA 141
+ V+VG K D V ++ R + + G ++A
Sbjct: 329 CLVVIVGCKKDLVTDDTREITEAAGMELA 357
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 46.0 bits (104), Expect = 2e-05
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 23/147 (15%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDE--RYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQ 67
K+LV GDS VGK+ +V + + Y Y T+G + K++N+
Sbjct: 7 KVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNIPET------------ 54
Query: 68 ERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPD--VIKVLVGNKCDV 125
T + + +I+ YD++N +SFN + WL + A D + L+ K D+
Sbjct: 55 ------TDSVWEHPNLVIVAYDVSNEQSFNACNKWLERCRSLAKSDNNLPGALIATKTDL 108
Query: 126 HENHRAVPKDRGQKIADDFDMPFFEVS 152
+ R + +G+ A+ ++ +FE S
Sbjct: 109 -KQRRVISTKQGKDYANSKNLEYFECS 134
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 45.2 bits (102), Expect = 4e-05
Identities = 35/121 (28%), Positives = 51/121 (42%), Gaps = 9/121 (7%)
Query: 8 TYKLLVLGD-SNVGKTC-IVHRYCDERYYDIYIS-TIGIDFKQKIINLDGVP------IK 58
T+K++ +GD + GK + Y R Y TIG+DF I +K
Sbjct: 50 TFKIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDFYVHFIEWRETDKKKDSTVK 109
Query: 59 LQIWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVL 118
LQ WD A ERF +T Y R G ++ + + + W ++E S V VL
Sbjct: 110 LQFWDVAEHERFLKMTAVYCRNCSGALVFWGPKSPSRLSSALKWSEKVKEANSGSVPMVL 169
Query: 119 V 119
V
Sbjct: 170 V 170
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQER 69
K+ V+G +VGK+ + ++ + ++ D Y TI F K I G L++ DTA Q+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFT-KNIKYKGQEFFLELVDTAGQDE 66
Query: 70 FRTLTTAYYRGAMGIILMYDITN 92
+ +Y G G IL+Y +T+
Sbjct: 67 YSIFPQSYSMGIHGYILVYAVTS 89
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 44.8 bits (101), Expect = 5e-05
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 13 VLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQERFRT 72
++G N GKT I++R E + T+G F + + I +WD Q++ R
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVST-VPTLG--FNVETVTYKN--ISFTVWDIGGQDKIRA 55
Query: 73 LTTAYYRGAMGIILMYDITNLESFNHLSYWLRN-IQEYASPDVIKVLVGNKCDV 125
L YY+G GII + D + E L + E VI +++ NK D+
Sbjct: 56 LWRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQVILLVIANKQDM 109
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 40.7 bits (91), Expect = 8e-04
Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQER 69
++L++G GKT I+++ + +I + I F + + I +WD Q++
Sbjct: 19 RILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVESVEYKN--ISFTVWDVGGQDK 73
Query: 70 FRTLTTAYYRGAMGIILMYDITNLESFNHLSYWL-RNIQEYASPDVIKVLVGNKCDV 125
R L Y++ G+I + D + E N L + +QE D + +++ NK D+
Sbjct: 74 IRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKDAVVLVMANKQDL 130
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQER 69
K++++G+ VGK+ + R+ +R+ Y T+ ++Q + G + +++ DTA +
Sbjct: 863 KVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQD-AEVAGEVVAIELTDTAGENS 921
Query: 70 FRTLTTAYYRGAMGIILMYDITNLESFNHLS 100
L G + ++L Y IT+ SF+ S
Sbjct: 922 PAKLERCLEIGEVFVVL-YSITSRHSFDEAS 951
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 39.1 bits (87), Expect = 0.003
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 79 RGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIK-VLVGNKCDVHENHRAVPKDRG 137
RG + ++L Y I + SF+ + R ++++ + D + V+V K D+ ++ R V + G
Sbjct: 126 RGDLYLVL-YSIVDRSSFDEARWIARYVKDHRNTDSMSMVIVATKKDL-DHLRRVDIEEG 183
Query: 138 QKIADDFDMPFFEVSCKNNIN-IEEAFLTLARKIREYRETKADAFELKERDNVVKPSVSE 196
+++ D F+EVS N ++E L ++I R K E K+ K S E
Sbjct: 184 LGFSNELDCTFYEVSISEGYNEVQELLHELLKRITRNRGEKGT--EKKDSFKEKKDSFKE 241
Query: 197 -TDASKCI 203
D+ K I
Sbjct: 242 KKDSFKII 249
Score = 35.1 bits (77), Expect = 0.041
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQER 69
+++VLG VGK+ + R+ R+ Y T+ + I+ +D + L I DTA + R
Sbjct: 18 RVVVLGKDGVGKSALTVRFLTRRFIGEYDQTLESTHRH-ILQIDNEDVSLDISDTAGEVR 76
Query: 70 FR 71
R
Sbjct: 77 VR 78
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 52 LDGVPIKLQIWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHL-SYWLRNIQEYA 110
+DGV + L++WDT Y+ A I+L + I SF + + W I++Y
Sbjct: 78 IDGVSVSLRLWDTFGDHSMNRRFA--YQNAHVIVLCFAINTPSSFKDVNAVWYPEIKKYC 135
Query: 111 SPDVIKVLVGNKCD 124
P V +LVG K D
Sbjct: 136 -PRVPIILVGTKSD 148
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 49 IINLDGVPIKLQIWDTAVQERFRTLTTAYYR 79
I + +G I+L +WDTA QE F +T AYYR
Sbjct: 26 IQSANGEDIRLMLWDTAGQEEFDAITKAYYR 56
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 57 IKLQIWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPD-VI 115
I +WD Q++ R L Y++GA GII + D + E + L + +++ + V
Sbjct: 154 ITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEVREELTRVLQHSELNGVP 213
Query: 116 KVLVGNKCDV 125
V+V NK D+
Sbjct: 214 VVVVANKQDL 223
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 37.1 bits (82), Expect = 0.010
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQER 69
++L++G GKT I+++ + +I + I F + + I +WD Q++
Sbjct: 19 RILMVGLDAAGKTTILYKL---KLGEIVTTIPTIGFNVETVEYKN--ISFTVWDVGGQDK 73
Query: 70 FRTLTTAYYRGAMGIILMYDITNLESFNHLSYWL-RNIQEYASPDVIKVLVGNKCDV 125
R L Y++ G+I + D + E L R + E D + ++ NK D+
Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRDAVLLVFANKQDL 130
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 36.7 bits (81), Expect = 0.013
Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 7/169 (4%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQER 69
++++LG GKT I+++ + I TIG + + + + L IWD Q++
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLKETVST-IPTIGFNVETLQPTKN---VTLTIWDVGGQDK 76
Query: 70 FRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYAS-PDVIKVLVGNKCDVHEN 128
R L Y++G G++ + D +++ L + + DV V+V NK D+
Sbjct: 77 IRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRDVPVVVVANKQDLPNA 136
Query: 129 HRAVPKDRGQKIADDFDMPFF--EVSCKNNINIEEAFLTLARKIREYRE 175
+A + + P+ E N + EA + R ++++ +
Sbjct: 137 LKAGEMAKHLGLLQHKRNPWHVQEACATNGDGLYEAMDHMVRMVKDFHK 185
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 36.7 bits (81), Expect = 0.013
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 10 KLLVLGDSNVGKTCIV-HRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQE 68
+LL++G GKT I+ H DE I TIG F +++ IK +WD Q+
Sbjct: 92 RLLMVGLDAAGKTTILYHLKLDEPVNTI--PTIG--FNVEVVEYKN--IKFTVWDIGGQD 145
Query: 69 RFRTLTTAYYRGAMGIILMYD 89
+ R L Y++ G+I + D
Sbjct: 146 KIRLLWRLYFQETQGLIFVVD 166
>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
Length = 1168
Score = 36.7 bits (81), Expect = 0.013
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 85 ILMYDITNLESFNHL-SYWLRNIQEYASPDVIKVLVGNKCDVHENHRAVPKDRGQKIADD 143
+L+Y IT+ ESF+ + +Y+ + + VI VL+ NK D+ + R V G+++A
Sbjct: 1063 VLIYSITSRESFHAVWNYYYHVVTSIEAKPVI-VLLANKHDL-GHKRKVLTTEGRQMAQA 1120
Query: 144 FDMPFFEVS 152
PF+EVS
Sbjct: 1121 IKCPFYEVS 1129
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 36.7 bits (81), Expect = 0.013
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGV--PIKLQIWDTAVQ 67
KL+++G GKT ++HR + Y I +T GI ++ + D + +IWD Q
Sbjct: 553 KLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFIFKIWDFGGQ 612
Query: 68 ERFRTLTTAYYRGAMGIILMYDI-TNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCD 124
E + + IL++++ E L WL I A P V+VG D
Sbjct: 613 EDYYATHQCFISTLSLYILVWNLEEGEEGAARLEGWLDTISARA-PGSSLVIVGTHLD 669
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 77 YYRGAMGIILMYDITNLESFNHLSYWLRNI-QEYASP----DVIKVLVGNK 122
+Y+ G +L+YD+T+ ESF L WL I ++ SP V+ V+ NK
Sbjct: 5 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANK 55
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 36.3 bits (80), Expect = 0.018
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 22/138 (15%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQER 69
K+++ GD N GKTC+ HR + + + YI T I DG + +
Sbjct: 227 KIVIKGDRNTGKTCMFHRLHGKPFNEQYIPTNEIQEDD-----DG--------NAVLDAG 273
Query: 70 FRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGNKCDVHENH 129
F Y+G G++++ DIT +F ++ L + P + +++ N+ D+ E H
Sbjct: 274 F----VDVYKGTHGVLMLLDITKPWTFTYVRRELPKV----PPHIPVLVLANRRDM-EEH 324
Query: 130 RAVPKDRGQKIADDFDMP 147
R V + + + P
Sbjct: 325 RLVDAEEITSFINSLERP 342
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 35.9 bits (79), Expect = 0.023
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 6 SATYKLLVLGDSNVGKTCIVHRY--CDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWD 63
S KL++LG+S GKT H C+ + T+G+ + + DG +++Q+ D
Sbjct: 258 SKRIKLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDG--LEVQVVD 315
Query: 64 TAVQERFRTLTTAYYRGAMGIILMYDITNLESF 96
A Q R++ LT ++ + L+ + NL S+
Sbjct: 316 CAGQRRYQ-LTHPFFLSEEALHLL--VINLHSY 345
>SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 34.7 bits (76), Expect = 0.054
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 85 ILMYDITNLESFNHLSYWLRNI--QEYASPDVIKVLVGNKCDVHENHRAVPKDRGQKIAD 142
+L+Y IT+L+SF +S ++ + + +V NK D E+ R V G +A
Sbjct: 92 LLVYSITSLQSFTDISCIIQQLTAMRTQGSHALLAIVANKTDA-ESQREVSTSDGVALAQ 150
Query: 143 DFDMPFFEVSCKNNI-NIEEAFLTLARKIREYR 174
F E+S + ++E F + ++ +++
Sbjct: 151 SLPCSFSEISTSTSYEDVERVFTEIIQEAVKFK 183
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 6 SATYKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIG 42
S Y ++VLG + VGKT +V R+ R+ + Y T+G
Sbjct: 322 SEKYSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 11 LLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQERF 70
+ VLG+ VGK+ ++ +C E + + Y+ TI + ++ D Q+W+ +Q
Sbjct: 30 IAVLGEGRVGKSSLIRGFCGEGFQEEYVPTIEEFVSKHLLYND------QLWEERLQAEI 83
Query: 71 R 71
R
Sbjct: 84 R 84
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIG 42
+K+L++GD+ VGKT V RY Y TIG
Sbjct: 23 FKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_8139| Best HMM Match : Ras (HMM E-Value=0.02)
Length = 96
Score = 32.3 bits (70), Expect = 0.29
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 118 LVGNKCDVHENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIREYRETK 177
L+GNK D+ E+ R V + + +AD+ + +FE S N+ ++ L ++ E
Sbjct: 2 LLGNKADL-EDDRVVDEAEARALADNLGLKYFETSAATGQNVTKSVEALLDQVMVRMENC 60
Query: 178 AD 179
D
Sbjct: 61 VD 62
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 31.5 bits (68), Expect = 0.51
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDT 64
+K+ +LG S VGKT ++ + + + +I TI D+ +N DGV + + DT
Sbjct: 188 FKMAILGGSAVGKTSLMRALFKKPFTNEHIPTID-DYIIHALNQDGVHYNVCLVDT 242
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 31.1 bits (67), Expect = 0.67
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 9 YKLLVLGDSNVGKTCIVH----RYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDT 64
Y +L+LG N GKT ++ ++C + Y I I I + +KL WD
Sbjct: 22 YFILILGLDNAGKTTLLEQIKRKFC-KTYNGIPFEKITTTVGLNIGKITISHVKLMFWDL 80
Query: 65 AVQERFRTL 73
Q+ RTL
Sbjct: 81 GGQQELRTL 89
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 31.1 bits (67), Expect = 0.67
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 57 IKLQIWDTAVQERFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWL-RNIQEYASPDVI 115
I +WD Q++ R L Y++ G+I + D + E L R + E D +
Sbjct: 510 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLAEDELRDAV 569
Query: 116 KVLVGNK 122
++ NK
Sbjct: 570 LLVFANK 576
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 29.5 bits (63), Expect = 2.0
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 9 YKLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQE 68
++L V+G VGK+ + RY + + ID+ K+ +++ V DTA QE
Sbjct: 2599 FRLCVVGSGGVGKSSVTIRYLKNEFTE-------IDYCGKLYDIEVV-------DTAGQE 2644
Query: 69 RFRTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRN--IQEYASPD----VIKVLVGNK 122
+ + + ++++ I + S+N L LR I+E+ + + V+VGNK
Sbjct: 2645 EYTSFRDSSLATGDAFLVLFAINSASSWNELKD-LRGKIIREHEESNTTCTIPMVIVGNK 2703
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 13 VLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTA 65
VLG VGK+ R R+ Y + +++K + +DG + L + DTA
Sbjct: 186 VLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHS-MEIDGQYLALDVLDTA 237
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 28.7 bits (61), Expect = 3.6
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 143 DFDMPFFEVSCKNNINIEEAFLTLARK 169
D ++ F E S K +N++ AF+ +AR+
Sbjct: 149 DHNVAFMETSAKTGLNVDLAFMAIARR 175
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIGIDFKQKIINLDGVPIKLQIWDTAVQER 69
++L+LG N GKT I+ E D+ T F K + G +L +WD Q +
Sbjct: 19 RILLLGLDNSGKTTILKSLASE---DVLHITPTQGFNIKSVQSKG-GFRLNVWDIGGQRK 74
Query: 70 FRTLTTAYY 78
R Y+
Sbjct: 75 IRPYWKNYF 83
>SB_13202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 61 IWDTAVQERFRTLTTAYYRGAMGIILMYD 89
+W+ AV + T Y+RGAMG + +Y+
Sbjct: 134 VWENAVTTKAVTHDGRYFRGAMGCLQIYN 162
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/68 (23%), Positives = 31/68 (45%)
Query: 133 PKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIREYRETKADAFELKERDNVVKP 192
P+++ +I D+ + F+ N + ++ L KI EYR + + + + DN
Sbjct: 2219 PEEQEDEIEDELEEEDFKEEEINLVEFDDEDLLTTHKIIEYRASPFELADKNDADNEQSS 2278
Query: 193 SVSETDAS 200
ET+ S
Sbjct: 2279 HDDETEDS 2286
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 10 KLLVLGDSNVGKTCIVHRYCDERYYDIYISTIG 42
+++VLG VGK+ + R +R+ Y ST+G
Sbjct: 18 RVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG 50
>SB_10932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 169 KIREYRETKADAFELKERDNVVKPSVSETDASKC 202
KIR +ET + K+ NV +S T ASKC
Sbjct: 44 KIRSNKETTNPEKQRKQTQNVTSSFLSTTSASKC 77
>SB_59757| Best HMM Match : Gly_radical (HMM E-Value=3.5)
Length = 389
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 17 SNVGKTCIVHRYCDERYYDI--YISTIGIDFKQKIINLDGVPIKLQI 61
SN G TC+ H + YY I Y+ T G FK ++I G + L I
Sbjct: 76 SNAGYTCLAHNFKGYDYYFILEYLFTNG--FKPEVIFTGGKVMYLNI 120
>SB_27993| Best HMM Match : zf-C5HC2 (HMM E-Value=1.5)
Length = 298
Score = 27.5 bits (58), Expect = 8.2
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 124 DVHENHRAVPKDRGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIREYRE 175
D+H + P RG D D V CK +++IE+A L E R+
Sbjct: 227 DLHVSVTGCPCIRGFSCEDAKDFTHTTVLCKASLDIEQAINLLIHSHEELRQ 278
>SB_7747| Best HMM Match : Alpha_L_fucos (HMM E-Value=0)
Length = 413
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 71 RTLTTAYYRGAMGIILMYDITNLESFNHLSYWLRNIQEYASPDVIKVLVGN 121
R L Y R GII+ + + ++ SF + W N + SP + + N
Sbjct: 35 RPLPDWYDRAKFGIIMHWGVYSVPSFGVAAEWFWNYWKSGSPQYVDFMKQN 85
>SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)
Length = 532
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 25 VHRYCDERYYDIYISTIGIDFKQKIINLDGVPIK 58
V+ YCDE D++++++G+D + DG K
Sbjct: 294 VNLYCDEPPVDVFLTSLGLDHELTDNKKDGSKTK 327
>SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 27.5 bits (58), Expect = 8.2
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 83 GIILMYDI--TNLESFNH-----LSYWLRNIQEYASPDVIKVLVGNKCDVHENHRAVPKD 135
G +++YD+ TN + LS + +Q+ P VI V +KCD +
Sbjct: 157 GFLVLYDVEATNAKRLEDTQEKVLSAVITYVQKSKRPFVI---VASKCDDTQLSLLQEVY 213
Query: 136 RGQKIADDFDMPFFEVSCKNNINIEEAFLTLARKIRE 172
R + ++P E S N+N++ AF+ LA+ I +
Sbjct: 214 RFAQ-TKKLNVPIVETSTYQNVNVDLAFVVLAQLIEK 249
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.323 0.138 0.415
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,721,271
Number of Sequences: 59808
Number of extensions: 260740
Number of successful extensions: 823
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 657
Number of HSP's gapped (non-prelim): 120
length of query: 204
length of database: 16,821,457
effective HSP length: 79
effective length of query: 125
effective length of database: 12,096,625
effective search space: 1512078125
effective search space used: 1512078125
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -