Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002448-TA|BGIBMGA002448-PA|IPR003577|Ras small GTPase,
Ras type, IPR003579|Ras small GTPase, Rab type, IPR013753|Ras
(295 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_03_0038 - 7297210-7297248,7297361-7297429,7297524-7297731,729... 53 3e-07
01_05_0340 - 21139885-21139978,21140169-21140272,21140379-211405... 50 2e-06
12_02_1213 + 27058329-27058370,27058634-27058711,27058807-270589... 48 1e-05
06_03_1387 - 29820358-29821035 46 5e-05
06_03_1187 + 28267535-28267568,28267620-28267645,28267808-282679... 46 5e-05
05_03_0286 - 11623575-11624063,11625098-11625262 44 1e-04
03_06_0501 - 34380155-34380637,34380961-34381029,34382206-343822... 44 1e-04
07_03_1397 + 26269186-26269525,26269727-26269932,26270225-262703... 44 2e-04
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201... 44 2e-04
04_04_0191 + 23468410-23468455,23468560-23468699,23469119-234692... 43 3e-04
01_06_1343 - 36461476-36461961,36463355-36463519 43 3e-04
03_05_0601 + 26039326-26039367,26039958-26040035,26040136-260403... 40 0.002
03_01_0326 + 2535800-2535938,2536891-2536959,2537310-2537375,253... 40 0.002
01_06_0712 + 31397167-31397402,31399823-31400252 39 0.004
10_08_0250 - 16179646-16179759,16180197-16180325,16180519-161806... 39 0.005
09_02_0222 + 5968232-5968467,5970811-5971187,5972216-5972256,597... 38 0.010
05_06_0082 - 25425050-25425479,25426551-25426783 37 0.022
06_03_0414 - 20548577-20549006,20553521-20553744 36 0.029
07_01_0685 - 5177340-5177363,5177770-5177865,5177991-5178053,517... 36 0.039
03_06_0637 - 35219212-35219754,35220405-35220587 36 0.039
01_06_0186 + 27294973-27295211,27295610-27296045 35 0.089
09_02_0464 - 9591139-9591571,9592601-9592818 33 0.21
03_01_0647 + 4745788-4745907,4746510-4746591,4746847-4746958,474... 33 0.36
05_01_0036 + 253734-253904,255216-255707 32 0.48
08_02_1318 - 26111031-26111276,26112139-26112427,26112936-261130... 31 1.1
07_01_0926 - 7775536-7775616,7775695-7775787,7775903-7775965,777... 31 1.1
05_07_0127 - 27872803-27873238,27873842-27874059 31 1.1
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 31 1.1
05_05_0118 - 22504483-22504566,22504650-22504742,22504852-225049... 31 1.5
10_06_0181 - 11532765-11533203,11536867-11537036 30 1.9
08_01_0627 + 5451140-5451839,5452635-5452662,5452730-5452786,545... 28 7.8
03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635 28 7.8
02_02_0705 - 13124955-13125212,13125309-13125389,13125539-13125862 28 7.8
>10_03_0038 -
7297210-7297248,7297361-7297429,7297524-7297731,
7297829-7297911,7298859-7298998,7299132-7299183
Length = 196
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 31 IAFDGATSEVEVLDTCGCAKRGCLAE-HLRWGDAFAVVYSVCDRRSFXXXXXXXXXXXRT 89
+A DG +++++ DT G C+ + R A +VY + R +F
Sbjct: 50 VAVDGKNTKLQIWDTAGQEAFRCITRSYYRGNAACLLVYDITRRETFFNHLASWLEDATQ 109
Query: 90 RLPGCTAVTLLGNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
+ L+GNK DL H RV+ +EG++ + G F E S
Sbjct: 110 HASARMTIILIGNKCDLSHRRVVSYQEGEQFAKEHGLLFMEAS 152
>01_05_0340 -
21139885-21139978,21140169-21140272,21140379-21140534,
21140622-21140693,21140782-21140829,21140923-21140970,
21141807-21141879,21142333-21142346
Length = 202
Score = 50.4 bits (115), Expect = 2e-06
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 4 NAVVVRYLTKRYIGEYSSTGDFLYQHR-IAFDGATSEVEVLDTCGCAK-RGCLAEHLRWG 61
+ +++R+ Y+ Y ST ++ R + DG T ++++ DT G + R + + R
Sbjct: 22 SCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGA 81
Query: 62 DAFAVVYSVCDRRSFXXXXXXXXXXXRTRLPGCTAVTLLGNKRDLEHARVIKAEEGQELS 121
VVY V D+ SF R + L+GNK DL RV+ E G+ L+
Sbjct: 82 HGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKL-LVGNKCDLAENRVVSYEAGKALA 140
Query: 122 LRFGCQFYEVS 132
G F E S
Sbjct: 141 DEIGIPFLETS 151
>12_02_1213 +
27058329-27058370,27058634-27058711,27058807-27058974,
27059834-27059882,27060084-27060157,27060692-27060785,
27060924-27061003,27061311-27061322
Length = 198
Score = 47.6 bits (108), Expect = 1e-05
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 4 NAVVVRYLTKRYIGEYSST-GDFLYQHRIAFDGATSEVEVLDTCGCAKRGCLAE-HLRWG 61
+++V+R++ +++ ST G + +A + T + E+ DT G + LA + R
Sbjct: 25 SSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGA 84
Query: 62 DAFAVVYSVCDRRSFXXXXXXXXXXXRTRLPGCTAVTLLGNKRDLEHARVIKAEEGQELS 121
A VVY + + SF P T + L GNK D+ AR + AEE + +
Sbjct: 85 AAAIVVYDITNAASFTRAKKWVQELQAQGNPN-TIMALAGNKADMVEARQVPAEEAKTYA 143
Query: 122 LRFGCQFYEVS 132
G F E S
Sbjct: 144 QENGLFFMETS 154
>06_03_1387 - 29820358-29821035
Length = 225
Score = 45.6 bits (103), Expect = 5e-05
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 15 YIGEYSSTGDFLYQHRIAFDGATSEVEVLDTCGCAK-RGCLAEHLRWGDAFAVVYSVCDR 73
+I S+ G + G + ++ DT G + R + + R +VY V R
Sbjct: 33 FIDSKSTIGIEFQTRTVEIGGKRVKAQIWDTAGQERYRAVTSAYYRGALGAMLVYDVTSR 92
Query: 74 RSFXXXXXXXXXXXRTRLPGCTAVTLLGNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
RSF R V L+GNK DL HAR + A+E + G F E S
Sbjct: 93 RSFHHAARWLHDL-RAHADNSIVVMLIGNKADLSHARAVAADEAAAFAEDQGLFFSEAS 150
>06_03_1187 +
28267535-28267568,28267620-28267645,28267808-28267975,
28268148-28268196,28268329-28268402,28268512-28268841
Length = 226
Score = 45.6 bits (103), Expect = 5e-05
Identities = 39/131 (29%), Positives = 57/131 (43%), Gaps = 3/131 (2%)
Query: 3 LNAVVVRYLTKRYIGEYSSTGDFLYQHRIAFDGATSEVEVLDTCGCAKRGCLAE-HLRWG 61
+ A +V YL I E S+ G + + D AT ++++ DT G + LA + R
Sbjct: 6 IQAKLVVYLGISNILE-STIGAAFFSQVLIMDEATVKLDIWDTAGQERYHSLAPMYYRGA 64
Query: 62 DAFAVVYSVCDRRSFXXXXXXXXXXXRTRLPGCTAVTLLGNKRDLEHARVIKAEEGQELS 121
A VVY + S+ R P + L+GNK DLE R + +E E +
Sbjct: 65 AAAVVVYDISSTDSYIRARKWVDELQRQGNPHLV-MALVGNKVDLEEKRQVGTQEAMEYA 123
Query: 122 LRFGCQFYEVS 132
R G F E S
Sbjct: 124 ERNGLFFIETS 134
>05_03_0286 - 11623575-11624063,11625098-11625262
Length = 217
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 31 IAFDGATSEVEVLDTCGCAK-RGCLAEHLRWGDAFAVVYSVCDRRSFXXXXXXXXXXXRT 89
+ +G T + ++ DT G + R + + R +VY + R+SF R
Sbjct: 54 LQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLREL-RD 112
Query: 90 RLPGCTAVTLLGNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
+ ++GNK DL H R + +EG+ L+ + G F E S
Sbjct: 113 HADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETS 155
>03_06_0501 -
34380155-34380637,34380961-34381029,34382206-34382229,
34382622-34382786
Length = 246
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 30 RIAFDGATSEVEVLDTCGCAK-RGCLAEHLRWGDAFAVVYSVCDRRSFXXXXXXXXXXXR 88
R +G T + ++ DT G + R + + R +VY + +++F R
Sbjct: 84 RKGIEGQTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLREL-R 142
Query: 89 TRLPGCTAVTLLGNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
+ ++GNK DL H R + E+GQ L+ + G F E S
Sbjct: 143 DHADSNIVIMMVGNKSDLNHLRSVPEEDGQALAEKEGLSFLETS 186
>07_03_1397 +
26269186-26269525,26269727-26269932,26270225-26270327,
26270570-26270577
Length = 218
Score = 43.6 bits (98), Expect = 2e-04
Identities = 31/119 (26%), Positives = 49/119 (41%), Gaps = 2/119 (1%)
Query: 15 YIGEYSSTGDFLYQHRIAFDGATSEVEVLDTCGCAK-RGCLAEHLRWGDAFAVVYSVCDR 73
Y S+ G ++ DG + ++ DT G + R + + R +VY + R
Sbjct: 40 YPNSKSTIGVEFQTQKLVIDGKEIKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRR 99
Query: 74 RSFXXXXXXXXXXXRTRLPGCTAVTLLGNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
++F T L+GNK DL+HAR + EG+ L+ G F E S
Sbjct: 100 QTFDSVGRWLNEL-HTHSDMNVVTILVGNKTDLKHAREVSTAEGKALAESQGLFFMETS 157
>02_04_0402 +
22618998-22619043,22619206-22619345,22620067-22620149,
22620234-22620438,22620524-22620592,22621099-22621188
Length = 210
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 4 NAVVVRYLTKRYIGEYSSTGDFLYQHR-IAFDGATSEVEVLDTCGCAK-RGCLAEHLRWG 61
+ +++++ KR+ + T + R I D ++++ DT G R + R
Sbjct: 20 SCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGA 79
Query: 62 DAFAVVYSVCDRRSFXXXXXXXXXXXRTRLPGCTAVTLLGNKRDLEHARVIKAEEGQELS 121
+VY + R +F + T V L+GNK DL H R + EEG++ +
Sbjct: 80 AGALLVYDITRRETFNHLASWLEDARQHANANMT-VMLIGNKCDLSHRRAVSYEEGEQFA 138
Query: 122 LRFGCQFYEVS 132
G F E S
Sbjct: 139 KEHGLVFMEAS 149
>04_04_0191 +
23468410-23468455,23468560-23468699,23469119-23469201,
23469346-23469550,23469632-23469735,23470290-23470449
Length = 245
Score = 42.7 bits (96), Expect = 3e-04
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 4 NAVVVRYLTKRYIGEYSSTGDFLYQHR-IAFDGATSEVEVLDTCGCAK-RGCLAEHLRWG 61
+ +++++ KR+ + T + R I D ++++ DT G R + R
Sbjct: 20 SCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPVKLQIWDTAGQESFRSITRSYYRGA 79
Query: 62 DAFAVVYSVCDRRSFXXXXXXXXXXXRTRLPGCTAVTLLGNKRDLEHARVIKAEEGQELS 121
+VY + R +F + T + L+GNK DL H R + EEG++ +
Sbjct: 80 AGALLVYDITRRETFNHLASWLEDARQHANANMT-IMLVGNKSDLSHRRAVSYEEGEQFA 138
Query: 122 LRFGCQFYEVS 132
G F E S
Sbjct: 139 KEHGLIFMEAS 149
>01_06_1343 - 36461476-36461961,36463355-36463519
Length = 216
Score = 42.7 bits (96), Expect = 3e-04
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Query: 6 VVVRYLTKRYIGEYSSTGDFLYQHR-IAFDGATSEVEVLDTCGCAK-RGCLAEHLRWGDA 63
++ R+ + E ST + R + +G T + ++ DT G + R + + R
Sbjct: 28 ILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIWDTAGQERYRAITSAYYRGAVG 87
Query: 64 FAVVYSVCDRRSFXXXXXXXXXXXRTRLPGCTAVTLLGNKRDLEHARVIKAEEGQELSLR 123
+V+ + R++F R V ++GNK DL H R + E+G S +
Sbjct: 88 ALLVFDITKRQTFDNVQRWLREL-RDHADANIVVMMVGNKSDLNHLRSVPEEDGHAFSEK 146
Query: 124 FGCQFYEVS 132
G F E S
Sbjct: 147 EGLSFLETS 155
>03_05_0601 +
26039326-26039367,26039958-26040035,26040136-26040303,
26040994-26041042,26041502-26041575,26041940-26041948
Length = 139
Score = 40.3 bits (90), Expect = 0.002
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 4 NAVVVRYLTKRYIGEYSST-GDFLYQHRIAFDGATSEVEVLDTCGCAKRGCLAE-HLRWG 61
+++V+R++ +++ ST G + +A + T + E+ DT G + LA + R
Sbjct: 25 SSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDETVKFEIWDTAGQERYHSLAPMYYRGA 84
Query: 62 DAFAVVYSVCDRRSFXXXXXXXXXXXRTRLPGCTAVTLLGNKRDLEHARVIKAEE 116
A VVY + + SF + + T V L GNK DL R ++ EE
Sbjct: 85 AAAIVVYDITNPASF-TRAKKWVQELQAQGNSSTVVALAGNKADLLETRQVQIEE 138
>03_01_0326 +
2535800-2535938,2536891-2536959,2537310-2537375,
2537979-2538100,2538501-2538629,2540462-2540569
Length = 210
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Query: 31 IAFDGATSEVEVLDTCGCAK-RGCLAEHLRWGDAFAVVYSVCDRRSFXXXXXXXXXXXRT 89
+ +G ++ + DT G + RG + + R +VY V R SF
Sbjct: 55 LTVNGKKLKLTIWDTAGQERFRGITSSYYRGAHGIILVYDVTKRESFTNLADVWAKEIEL 114
Query: 90 RLPGCTAVTLL-GNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
+ +L GNK D R++ EEG + GC F E S
Sbjct: 115 HSTNKECIKMLVGNKVDKNEERMVTREEGLAFAQESGCLFLESS 158
>01_06_0712 + 31397167-31397402,31399823-31400252
Length = 221
Score = 39.1 bits (87), Expect = 0.004
Identities = 33/126 (26%), Positives = 49/126 (38%), Gaps = 3/126 (2%)
Query: 9 RYLTKRYIGEYSSTGDFLYQHR-IAFDGATSEVEVLDTCGCAK-RGCLAEHLRWGDAFAV 66
R+ + E ST + R I DG + ++ DT G + R + + R +
Sbjct: 37 RFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALL 96
Query: 67 VYSVCDRRSFXXXXXXXXXXXRTRLPGCTAVTLLGNKRDLEHARVIKAEEGQELSLRFGC 126
VY V R +F R V L+GNK DL H + E+G+E +
Sbjct: 97 VYDVTRRATFDNVARWLKEL-RDHTDPSIVVMLVGNKSDLRHLVAVSTEDGKEYAEAESL 155
Query: 127 QFYEVS 132
F E S
Sbjct: 156 YFMETS 161
>10_08_0250 -
16179646-16179759,16180197-16180325,16180519-16180640,
16181073-16181138,16182202-16182270,16182989-16183157
Length = 222
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 2/104 (1%)
Query: 31 IAFDGATSEVEVLDTCGCAK-RGCLAEHLRWGDAFAVVYSVCDRRSFXXXXXXXXXXXRT 89
+ G ++ + DT G + R + + R +VY V R SF +
Sbjct: 65 LTIGGKKLKLTIWDTAGQERFRTITSSYYRGAQGIILVYDVTKRESFTNLAEVWSKEIES 124
Query: 90 RLPGCTAVTLL-GNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
+ +L GNK D E R + EEG + GC F E S
Sbjct: 125 HSSNKDCIKMLVGNKIDKEDERTVTREEGLAFAEESGCLFLESS 168
>09_02_0222 +
5968232-5968467,5970811-5971187,5972216-5972256,
5972808-5972843
Length = 229
Score = 37.9 bits (84), Expect = 0.010
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Query: 6 VVVRYLTKRYIGEYSSTGDFLYQHR-IAFDGATSEVEVLDTCGCAK-RGCLAEHLRWGDA 63
++ R+ + + +T +Q R + D T + ++ DT G + R + + R
Sbjct: 34 LLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVG 93
Query: 64 FAVVYSVCDRRSFXXXXXXXXXXXRTRLPGCTAVTLLGNKRDLEHARVIKAEEGQELSLR 123
+VY + R+SF R + L+GNK DL RV+ E+ +E + R
Sbjct: 94 AMLVYDITKRQSFDHVARWLEEL-RGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAER 152
Query: 124 FGCQFYEVS 132
F E S
Sbjct: 153 ENLFFMETS 161
>05_06_0082 - 25425050-25425479,25426551-25426783
Length = 220
Score = 36.7 bits (81), Expect = 0.022
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 34 DGATSEVEVLDTCGCAK-RGCLAEHLRWGDAFAVVYSVCDRRSFXXXXXXXXXXXRTRLP 92
DG + ++ DT G + R + + R +VY V R +F P
Sbjct: 62 DGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDP 121
Query: 93 GCTAVTLLGNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
+ L+GNK DL H + E+G+E + F E S
Sbjct: 122 SIVCM-LIGNKSDLRHLVAVSTEDGKEFAEAESMYFMETS 160
>06_03_0414 - 20548577-20549006,20553521-20553744
Length = 217
Score = 36.3 bits (80), Expect = 0.029
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 34 DGATSEVEVLDTCGCAK-RGCLAEHLRWGDAFAVVYSVCDRRSFXXXXXXXXXXXRTRLP 92
DG + ++ DT G + R + + R +VY V R S R
Sbjct: 59 DGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVT-RHSTFENVERWLKELRDHTD 117
Query: 93 GCTAVTLLGNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
V L+GNK DL H ++ +EG+ + R F E S
Sbjct: 118 PNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETS 157
>07_01_0685 -
5177340-5177363,5177770-5177865,5177991-5178053,
5178138-5178232,5178941-5179028,5179372-5179444,
5179866-5179920,5180355-5180463
Length = 200
Score = 35.9 bits (79), Expect = 0.039
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 99 LLGNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
L+GNK D++ RV+ +GQ+L+ +G +F+E S
Sbjct: 129 LVGNKVDMDTKRVVSTAQGQKLADEYGMKFFETS 162
>03_06_0637 - 35219212-35219754,35220405-35220587
Length = 241
Score = 35.9 bits (79), Expect = 0.039
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 34 DGATSEVEVLDTCGCAK-RGCLAEHLRWGDAFAVVYSVCDRRSFXXXXXXXXXXXRTRLP 92
+G + ++ DT G + R + + R +VY V +F R
Sbjct: 81 EGKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTKATTFENVKRWLKEL-RDHAD 139
Query: 93 GCTAVTLLGNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
V L+GNK DL+H R + E+ + R G F E S
Sbjct: 140 SNIVVMLIGNKIDLKHLRSVSLEDATSFAEREGLSFVETS 179
>01_06_0186 + 27294973-27295211,27295610-27296045
Length = 224
Score = 34.7 bits (76), Expect = 0.089
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 31 IAFDGATSEVEVLDTCGCAK-RGCLAEHLRWGDAFAVVYSVCDRRSFXXXXXXXXXXXRT 89
+ D + ++ DT G + R + + R VVY V R +F R
Sbjct: 61 VRVDDRLVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRRITFENAERWLKEL-RD 119
Query: 90 RLPGCTAVTLLGNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
V L+GNK DL H R + AE+ + + G E S
Sbjct: 120 HTDANIVVMLVGNKADLRHLRAVPAEDARAFAEAHGTFSMETS 162
>09_02_0464 - 9591139-9591571,9592601-9592818
Length = 216
Score = 33.5 bits (73), Expect = 0.21
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 31 IAFDGATSEVEVLDTCGCAK-RGCLAEHLRWGDAFAVVYSVCDRRSFXXXXXXXXXXXRT 89
I D + ++ DT G + R + + R VVY V +F R
Sbjct: 54 IRVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKEL-RD 112
Query: 90 RLPGCTAVTLLGNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
+ L+GNK DL H R + E+ + + R F E S
Sbjct: 113 HTDANIVIMLVGNKADLRHLRAVSVEDAKGFAERESTFFMETS 155
>03_01_0647 +
4745788-4745907,4746510-4746591,4746847-4746958,
4747607-4747697,4747805-4747969
Length = 189
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 89 TRLPGCTAVTLLGNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
T+ G + L+GNK DL R I +EG+ + G F E S
Sbjct: 84 TQRGGDVIIVLVGNKTDLVDKRQISTDEGEAKAQEHGAMFMETS 127
>05_01_0036 + 253734-253904,255216-255707
Length = 220
Score = 32.3 bits (70), Expect = 0.48
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 34 DGATSEVEVLDTCGCAK-RGCLAEHLRWGDAFAVVYSVCDRRSFXXXXXXXXXXXRTRLP 92
+G + ++ DT G + R + + R +VY V +F R
Sbjct: 59 EGKIIKAQIWDTAGQERYRAITSAYYRGALGAVLVYDVSKPTTFDNISRWLKEL-RDHAD 117
Query: 93 GCTAVTLLGNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
+ L+GNK DL+H R + ++ + + G + E S
Sbjct: 118 ANIRIMLVGNKTDLKHLRAVATDDAHKFAEAEGLSYIETS 157
>08_02_1318 -
26111031-26111276,26112139-26112427,26112936-26113036,
26113628-26113878,26114842-26114865,26115793-26116129
Length = 415
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 96 AVTLLGNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
A L+GNK DL++ R + EEG+ L+ G F E S
Sbjct: 128 AKMLVGNKCDLDNIREVPVEEGKALAEAEGLFFMETS 164
>07_01_0926 -
7775536-7775616,7775695-7775787,7775903-7775965,
7776326-7776423,7776661-7776761,7776865-7776937,
7778575-7778647
Length = 193
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 99 LLGNKRDLEHA-RVIKAEEGQELSLRFGCQFYEVS 132
L+GNK D++ + R + +GQ L+ +G +F+E S
Sbjct: 103 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETS 137
>05_07_0127 - 27872803-27873238,27873842-27874059
Length = 217
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 31 IAFDGATSEVEVLDTCGCAK-RGCLAEHLRWGDAFAVVYSVCDRRSFXXXXXXXXXXXRT 89
I D + ++ DT G + R + + R VVY V +F +
Sbjct: 54 IHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMREL-KD 112
Query: 90 RLPGCTAVTLLGNKRDLEHARVIKAEEGQELSLRFGCQFYEVS 132
+ L+GNK DL H R + E+ + + + F E S
Sbjct: 113 HTDANIVIMLVGNKADLRHLRAVSTEDAKAFAEKENTFFMETS 155
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 99 LLGNKRDLEHA-RVIKAEEGQELSLRFGCQFYEVS 132
L+GNK D++ + R + +GQ L+ +G +F+E S
Sbjct: 103 LVGNKADMDESKRAVPTSKGQALADEYGIKFFETS 137
>05_05_0118 -
22504483-22504566,22504650-22504742,22504852-22504914,
22505048-22505145,22505378-22505478,22505581-22505653,
22505872-22505910,22506946-22507018
Length = 207
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 99 LLGNKRDLEHA-RVIKAEEGQELSLRFGCQFYEVS 132
L+GNK D++ + R + +GQ L+ +G +F+E S
Sbjct: 116 LVGNKADMDESKRAVPTAKGQALADEYGIKFFETS 150
>10_06_0181 - 11532765-11533203,11536867-11537036
Length = 202
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 66 VVYSVCDRRSFXXXXXXXXXXXRTRLPGCTAVTLLGNKRDLEHARVIKAEEGQELSLRFG 125
+VY + R+SF R + L+GNK DLE R + E+ +E + +
Sbjct: 74 LVYDITKRQSFDHIPRWLEEL-RGHADKNIVIMLVGNKSDLEDERAVSTEDAKEFAEKEN 132
Query: 126 CQFYEVS 132
F E S
Sbjct: 133 LFFLETS 139
>08_01_0627 +
5451140-5451839,5452635-5452662,5452730-5452786,
5453205-5453874
Length = 484
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 255 RRIYAGDRHDPRPEQQKREEETAVSE 280
RR G+RHDP+PE + E+ T +E
Sbjct: 56 RRRGRGNRHDPQPEAEVEEDTTDRAE 81
>03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635
Length = 603
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 168 YSVSKVGFTNKESTAESCKGTRIRFVAAMPRRKLAAYSVSKVGFTNKESTAESCKGTR 225
Y + V ++TA +CK ++ V + + A VS+VG T + AE C+G R
Sbjct: 351 YVLDSVRDEGLQATARTCKKLQVLHVLPLNALEDADELVSEVGLT---AIAEGCRGLR 405
>02_02_0705 - 13124955-13125212,13125309-13125389,13125539-13125862
Length = 220
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 198 RRKLAAYSVSKVGFTNKESTAESCKGTRVRSIATMPRRKL 237
RR+LA YS+ K F + + A + R+ S+ RR++
Sbjct: 25 RRQLAVYSIPKSSFRSAAAAARARNPPRLASVGGAERRRV 64
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.322 0.135 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,690,943
Number of Sequences: 37544
Number of extensions: 229600
Number of successful extensions: 538
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 507
Number of HSP's gapped (non-prelim): 33
length of query: 295
length of database: 14,793,348
effective HSP length: 82
effective length of query: 213
effective length of database: 11,714,740
effective search space: 2495239620
effective search space used: 2495239620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 60 (28.3 bits)
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