GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002447-TA|BGIBMGA002447-PA|undefined
         (133 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     25   0.18 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.23 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   0.95 
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   2.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   2.2  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   5.0  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    20   6.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    20   6.7  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 25.4 bits (53), Expect = 0.18
 Identities = 14/54 (25%), Positives = 25/54 (46%)

Query: 30  ARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQLLQEVMKTFEDIPSKVQQY 83
           A + +++ + K++ LDN D   +     AE P D +++  M   E  P     Y
Sbjct: 52  AASHLQQQQLKKQRLDNGDYPYENGHMGAEFPLDIMMRRDMSRLEKSPLLANGY 105


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.0 bits (52), Expect = 0.23
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 12  KKPQ-IPSPATSPSVMPDAARTFIKRPETKRRSL 44
           K PQ  PSP+++PS +P   RT    P    RS+
Sbjct: 69  KSPQGAPSPSSTPSSLP-TQRTSTSNPTYSSRSV 101



 Score = 21.4 bits (43), Expect = 2.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 4   TPTTSGAAKKPQIPSP 19
           +PT       PQ+PSP
Sbjct: 264 SPTAGAGGLPPQVPSP 279


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 0.95
 Identities = 9/23 (39%), Positives = 17/23 (73%)

Query: 94  LESQSDKSIRILFELSHDVIAVK 116
           + ++S K IRILF++S ++  V+
Sbjct: 307 INAESRKPIRILFDVSSEIYNVE 329


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 3/51 (5%)

Query: 12  KKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDN---MDLYRKQQQYYAE 59
           KKP  P       V+PDA +T   +   K++         LY+ +Q ++ +
Sbjct: 52  KKPCTPDGEELKRVLPDALKTSCAKCTDKQKQGAKTVIQHLYKNKQDWWKQ 102


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 6/90 (6%)

Query: 46  NMDLYRKQQQYYAETPSDQLLQEVMKTFEDIPSKVQQYPQMRR----DIKSFLESQSDKS 101
           N  +Y K   Y     ++  LQ +      I  K+Q +P + +    D K F    S  +
Sbjct: 438 NHPVYHKDPHYGFHNVTNTTLQNLTPQLNYISMKLQSFPLLSQRHQIDAKMFCNESSVSN 497

Query: 102 IRILF-ELSHDVIAVKGTCCKKYSASIKGY 130
               + E +H V    GT  +      KGY
Sbjct: 498 CENEYCECTHVVNIPLGTVVEMVLID-KGY 526


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
          protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 5.0
 Identities = 11/46 (23%), Positives = 22/46 (47%)

Query: 11 AKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQY 56
          +K P  P       V+P+A +T   +   K+R+     + R +++Y
Sbjct: 49 SKGPCPPQGVDLKRVLPEALQTNCAKCTEKQRTAAYRSIKRLKKEY 94


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)

Query: 116 KGTCCKKYSASIKGYK 131
           +G   KKY A IKG K
Sbjct: 111 EGEYRKKYEAEIKGKK 126


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 4   TPTTSGAAKKPQIPSPATSPSV 25
           TP    AA+    PSP   PS+
Sbjct: 225 TPEQIQAAEVKDFPSPGGFPSI 246


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.129    0.364 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,515
Number of Sequences: 317
Number of extensions: 1136
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 133
length of database: 114,650
effective HSP length: 51
effective length of query: 82
effective length of database: 98,483
effective search space:  8075606
effective search space used:  8075606
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)
S2: 39 (19.8 bits)