Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002447-TA|BGIBMGA002447-PA|undefined
(133 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 31 0.23
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 30 0.54
09_03_0051 + 11902322-11903125 29 1.2
03_06_0160 + 32078535-32078664,32078989-32079290 29 1.2
09_02_0450 + 9468495-9468528,9468947-9469062,9470031-9470858,947... 29 1.6
10_08_1002 + 22160109-22160264,22160374-22160484,22160612-221606... 28 2.2
09_04_0696 - 19559227-19559622,19559710-19559862,19559957-195607... 28 2.9
08_02_1508 + 27602104-27602265,27602398-27602449,27603357-276047... 28 2.9
12_02_1269 + 27462644-27463612 27 3.8
06_01_0553 + 3942907-3943617 27 3.8
12_01_0861 + 8153108-8153266,8154633-8155136 27 5.0
12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,167... 27 5.0
11_01_0437 - 3347960-3349246 27 5.0
11_01_0221 - 1720952-1721164,1721351-1721428,1721836-1721895,172... 27 5.0
06_01_0449 - 3176135-3176329,3176531-3177289,3177420-3177905,317... 27 5.0
10_08_0683 - 19860777-19861070,19861677-19861874,19862498-198626... 27 6.6
08_02_0163 + 13470178-13470335,13470635-13470656,13470885-134710... 27 6.6
05_01_0190 + 1366791-1366817,1367536-1367616,1367858-1367900,136... 27 6.6
04_04_0220 - 23708174-23708316,23708569-23708851 27 6.6
03_06_0767 + 36126254-36126264,36126676-36126769,36127068-361273... 27 6.6
04_04_1201 - 31697707-31697765,31697863-31698013,31698100-31699260 26 8.7
02_03_0407 - 18675368-18675378,18676047-18676977,18677323-186773... 26 8.7
01_01_1021 + 8061007-8061150,8061244-8061708 26 8.7
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 31.5 bits (68), Expect = 0.23
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 32 TFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQLLQEVMKTFEDIPSKVQQYPQMRRDIK 91
+ + E R+L + K+ AE QL +EV +T D+ SK+ + +++
Sbjct: 354 SLLSSKEADYRNLCSFSDQTKESLELAEAKIQQLEEEVHRTRNDLSSKISSIDLLNEELQ 413
Query: 92 SFLESQSDKSIRILFELSHDVIAVKGT 118
+ L S +++ L EL+ D +K +
Sbjct: 414 A-LNSAKNEAEEKLSELTKDYTDLKAS 439
>02_01_0075 -
522554-522616,522742-522748,523033-523136,
523237-523368,525209-525401,525978-526330,
526693-526791,526864-526935,527062-527213,
527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,
529370-529450,530170-530271,530345-530440,
531437-531444,531575-531616,531830-531894,
534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 30.3 bits (65), Expect = 0.54
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 11 AKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDL 49
++ P PSP+TS P R +PET +LDN DL
Sbjct: 28 SRAPPSPSPSTSSRAKP---RKVAAQPETDEAALDNPDL 63
>09_03_0051 + 11902322-11903125
Length = 267
Score = 29.1 bits (62), Expect = 1.2
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 10 AAKKPQIPSPATSPSV-MPDAARTFIKRPETKRRSLDNMDLYRKQQQYYA 58
AA +PQ P+P PSV PD +RPET+ ++ + Y + YA
Sbjct: 105 AASEPQTPTPPPRPSVAAPDTPPA--QRPETEEEEEEDAN-YMSMDEAYA 151
>03_06_0160 + 32078535-32078664,32078989-32079290
Length = 143
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 86 MRRDIKSFLESQSDKSIRILFELSHDVIAVKGTC 119
+RR I +FL QS ++IRI+ + D++ ++G C
Sbjct: 8 IRRKILAFLSHQSSQAIRIIRDF-RDLMGLRGVC 40
>09_02_0450 +
9468495-9468528,9468947-9469062,9470031-9470858,
9470955-9471107,9471194-9471604
Length = 513
Score = 28.7 bits (61), Expect = 1.6
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 73 FEDIPSKVQQYPQMRRDIKSFLESQSDKSIRILFELSHDVIAVKGTCCKKYSASIKGYK 131
FE+ PS ++Q P+ R D ++ +S + LFEL++ ++ C S + ++
Sbjct: 389 FEN-PSHLRQLPEQRHDNLRNVKITGFRSAKSLFELTYHILENTSVECLTLDTSFESFR 446
>10_08_1002 +
22160109-22160264,22160374-22160484,22160612-22160689,
22160774-22160921,22161007-22161077,22161430-22161526,
22161603-22161790,22161960-22162223
Length = 370
Score = 28.3 bits (60), Expect = 2.2
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 50 YRKQQQYYAETPSDQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQ---SDKSIRILF 106
+ ++QY ++ D +++ V + D S + Y + ++KS +E Q ++ R+
Sbjct: 271 HHNKRQYASDHTQDFVVKAVRQVLFDSISSFKGYLENENELKSLIECQFIALQEAFRVSA 330
Query: 107 ELSHDV 112
+LS DV
Sbjct: 331 DLSEDV 336
>09_04_0696 -
19559227-19559622,19559710-19559862,19559957-19560784,
19561727-19561842,19562286-19562319
Length = 508
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 73 FEDIPSKVQQYPQMRRDIKSFLESQSDKSIRILFELSHDVIAVKGTCCKKYSASIKGYK 131
FE+ PS ++Q P+ R D ++ +S++ L EL++ ++ C S + ++
Sbjct: 389 FEN-PSHLRQLPEQRHDNLRNVKITGFRSVKSLLELTYHILENTSVECLTLDTSFESFR 446
>08_02_1508 +
27602104-27602265,27602398-27602449,27603357-27604757,
27604833-27606140,27606594-27607435
Length = 1254
Score = 27.9 bits (59), Expect = 2.9
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 4 TPTTSGAAKKPQIPSPA-TSPSVMPDAARTFIKRPET-KRRSLDNM 47
+PT + + Q P+P+ TSP+ +P + R P+T +RR+ D M
Sbjct: 932 SPTGMPTSSRRQEPTPSVTSPTGVPTSPRRQEPTPDTQRRRAADQM 977
>12_02_1269 + 27462644-27463612
Length = 322
Score = 27.5 bits (58), Expect = 3.8
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 27 PDAARTFIKRPETKRRSLDNMDLYRKQQQYYA 58
P T P K+ +D++D++R ++YYA
Sbjct: 181 PSTFATLAMDPVRKQEIIDDLDMFRDGKEYYA 212
>06_01_0553 + 3942907-3943617
Length = 236
Score = 27.5 bits (58), Expect = 3.8
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 4 TPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLY 50
T TT+GAA + +PA + + F P+ S D DLY
Sbjct: 172 TRTTNGAATTYKAAAPAAASAAAAAITGCFAANPDAYSYSDDEFDLY 218
>12_01_0861 + 8153108-8153266,8154633-8155136
Length = 220
Score = 27.1 bits (57), Expect = 5.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 7 TSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLD 45
++G P+ P P +SPS+ P + T + E R LD
Sbjct: 116 SAGLVAIPRCPPPTSSPSLDPPESSTTVALIELDDRRLD 154
>12_01_0222 - 1675077-1675289,1675476-1675553,1675943-1676002,
1676103-1676206,1676321-1676479,1676768-1676894,
1677569-1677736,1677890-1678000,1678090-1678243,
1678409-1678744,1678854-1679038,1679141-1679239,
1679376-1679639,1679776-1679952,1680351-1680644,
1680753-1680920,1681574-1681918,1682002-1682171,
1682272-1682422,1683296-1683365,1683456-1683640,
1683999-1684092,1684195-1684313,1684658-1684717,
1684844-1684930,1685631-1685717,1685905-1686013,
1686105-1686183,1686350-1686437,1686611-1686675,
1687570-1687722,1688514-1688620,1688702-1688784,
1688926-1689016,1689095-1689231,1689612-1689701,
1689795-1689962,1690366-1690560
Length = 1809
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/62 (17%), Positives = 27/62 (43%)
Query: 52 KQQQYYAETPSDQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQSDKSIRILFELSHD 111
+ Y T + + L E+ K + D P ++ P+ ++ ES+ + + + D
Sbjct: 1734 RTNSYKVHTAASECLLELSKLYRDFPLVDRKGPKFSGELAELCESEKSEQAKAFLKQCMD 1793
Query: 112 VI 113
++
Sbjct: 1794 IL 1795
>11_01_0437 - 3347960-3349246
Length = 428
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 1 MFHTPTTSGAAKKPQIPSPATSPSVMPDAARTFI 34
++HTP +S ++K P+ P P P + P A +
Sbjct: 168 LYHTPLSSPSSKSPRRPQP---PPIPPPAGNVVV 198
>11_01_0221 - 1720952-1721164,1721351-1721428,1721836-1721895,
1721996-1722099,1722214-1722372,1722668-1722794,
1723469-1723636,1723789-1723899,1723989-1724142,
1724308-1724643,1724753-1724937,1725040-1725138,
1725275-1725538,1725674-1725850,1726249-1726542,
1726649-1726816,1727473-1727817,1727901-1728070,
1728171-1728321,1729193-1729262,1729353-1729537,
1729896-1729989,1730094-1730212,1730558-1730617,
1730744-1730830,1732348-1732434,1732622-1732730,
1732822-1732900,1733067-1733154,1733328-1733392,
1734287-1734439,1735231-1735337,1735419-1735501,
1735643-1735733,1735812-1735948,1736118-1736207,
1736301-1736468,1736875-1737057
Length = 1805
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/62 (17%), Positives = 27/62 (43%)
Query: 52 KQQQYYAETPSDQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQSDKSIRILFELSHD 111
+ Y T + + L E+ K + D P ++ P+ ++ ES+ + + + D
Sbjct: 1730 RTNSYKVHTAASECLLELSKLYRDFPLVDRKGPKFSGELAELCESEKSEQAKAFLKQCMD 1789
Query: 112 VI 113
++
Sbjct: 1790 IL 1791
>06_01_0449 -
3176135-3176329,3176531-3177289,3177420-3177905,
3178302-3178421,3178637-3178703,3178784-3179007,
3179149-3179234,3179936-3180509
Length = 836
Score = 27.1 bits (57), Expect = 5.0
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 28 DAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQLLQEVMKTFEDIPSKVQQ 82
+A+ +KR E++R + DLY Q Q ET ++ L V + FE + K+QQ
Sbjct: 343 EASDERLKRIESERLARTLEDLYLSQVQQRKET--EESLSRVQQEFEQL--KIQQ 393
>10_08_0683 -
19860777-19861070,19861677-19861874,19862498-19862659,
19862763-19862911,19863089-19863236,19863317-19863385,
19863471-19863719,19863937-19864131,19864444-19864560,
19864978-19866537
Length = 1046
Score = 26.6 bits (56), Expect = 6.6
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 3 HTPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPE 38
+ P + AA P PSP SPS+ P + +F PE
Sbjct: 98 YDPYHAPAAAYPSYPSPNPSPSISPSS--SFHHHPE 131
>08_02_0163 +
13470178-13470335,13470635-13470656,13470885-13471055,
13471157-13471363,13471458-13471700
Length = 266
Score = 26.6 bits (56), Expect = 6.6
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 34 IKRPET-KRRSLDNMDLYRKQQQYYAETPSDQL 65
I+ P+ K + + M++ R QQ A TP+DQL
Sbjct: 223 IESPDALKAKVAEAMEVLRNAQQQQANTPTDQL 255
>05_01_0190 +
1366791-1366817,1367536-1367616,1367858-1367900,
1368104-1368182,1368291-1368450,1368565-1368692,
1369134-1369202,1369796-1369883,1370516-1370591,
1370767-1370840,1372635-1372742,1373783-1373944,
1374179-1374283,1374447-1374527,1374603-1375803,
1376654-1376750,1378086-1378160,1378461-1378623
Length = 938
Score = 26.6 bits (56), Expect = 6.6
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 5 PTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLD 45
P + +PQIPS T + DAA F+ +R D
Sbjct: 803 PAPADVNSQPQIPSTETGIEPLTDAASAFLSTNIERRSGAD 843
>04_04_0220 - 23708174-23708316,23708569-23708851
Length = 141
Score = 26.6 bits (56), Expect = 6.6
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 37 PETKRRSLDNMDLY-RKQQQYYAETPSDQLLQEVMKTFEDIPSKV 80
P RRS ++ Y P+ LQE+ K F +P KV
Sbjct: 32 PPISRRSFPKGFIFGTSSSSYQVRHPTSSFLQEIEKNFIKLPPKV 76
>03_06_0767 +
36126254-36126264,36126676-36126769,36127068-36127315,
36127391-36127647,36127949-36127998,36128056-36128286,
36128851-36128928,36129315-36129441,36129520-36129629,
36130003-36130152,36131106-36131183,36131293-36131421,
36131502-36131699,36132199-36132342
Length = 634
Score = 26.6 bits (56), Expect = 6.6
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 17 PSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQLLQEVMKTFEDI 76
P+P+ SP V PD + +K + + L QQQ QL Q+ + +F D
Sbjct: 279 PAPSGSPKVRPDESDYMMKLKMAQMQQPSGHRLMELQQQ------QQQLQQDNLDSFVDF 332
Query: 77 PSKVQQY 83
V +
Sbjct: 333 DENVDSF 339
>04_04_1201 - 31697707-31697765,31697863-31698013,31698100-31699260
Length = 456
Score = 26.2 bits (55), Expect = 8.7
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 14 PQIPSPATSP-SVMPDAARTFIKRPETKRRSLDNMDLYRK 52
P++P PAT+P V P AA +++P+ + + +M L K
Sbjct: 241 PELP-PATAPVQVKPRAANVKMRKPKAREPNKRDMTLEEK 279
>02_03_0407 -
18675368-18675378,18676047-18676977,18677323-18677376,
18677809-18678039,18678112-18678319,18678405-18678433,
18678638-18678706,18678832-18678893,18679056-18679133,
18679243-18679315,18681135-18681260
Length = 623
Score = 26.2 bits (55), Expect = 8.7
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 28 DAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQLLQEVMKTFEDIPSKVQQYPQMR 87
D+ R + + + + D YR + TPS+ LL+E ++T E+ ++Q M+
Sbjct: 91 DSGRVLMMLGKAQYELQKSADRYRTNIIHTITTPSESLLKE-LQTLEE----MKQQCDMK 145
Query: 88 RD-IKSFLESQSDK 100
RD ++ S SDK
Sbjct: 146 RDAYETMRASYSDK 159
>01_01_1021 + 8061007-8061150,8061244-8061708
Length = 202
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 5 PTTSGAAKKPQIPSPATSPSVMPDAA 30
PT A PSPAT+P+ P AA
Sbjct: 53 PTKEETATSSSSPSPATTPTPSPAAA 78
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.129 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,684,039
Number of Sequences: 37544
Number of extensions: 140222
Number of successful extensions: 799
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 785
Number of HSP's gapped (non-prelim): 25
length of query: 133
length of database: 14,793,348
effective HSP length: 75
effective length of query: 58
effective length of database: 11,977,548
effective search space: 694697784
effective search space used: 694697784
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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