Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002447-TA|BGIBMGA002447-PA|undefined
(133 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 33 0.10
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 31 0.42
SB_50684| Best HMM Match : Toxin_trans (HMM E-Value=4.8) 30 0.55
SB_24034| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.55
SB_46046| Best HMM Match : DUF164 (HMM E-Value=0.38) 30 0.73
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.73
SB_31263| Best HMM Match : TP2 (HMM E-Value=5.5) 29 1.3
SB_5435| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_15511| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_21468| Best HMM Match : RVT_1 (HMM E-Value=1.2) 28 2.2
SB_46154| Best HMM Match : zf-C2H2 (HMM E-Value=7.9e-27) 28 2.9
SB_19785| Best HMM Match : SRR1 (HMM E-Value=8.8e-19) 28 2.9
SB_1300| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.9
SB_28380| Best HMM Match : MCPsignal (HMM E-Value=0) 27 3.9
SB_23483| Best HMM Match : Glyco_hydro_38C (HMM E-Value=0) 27 3.9
SB_23426| Best HMM Match : NHL (HMM E-Value=1.1e-19) 27 3.9
SB_59266| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.9
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.9
SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4) 27 3.9
SB_54710| Best HMM Match : Linker_histone (HMM E-Value=6e-38) 27 5.1
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.1
SB_18627| Best HMM Match : Histone (HMM E-Value=1.7e-30) 27 5.1
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 27 5.1
SB_41133| Best HMM Match : LRR_1 (HMM E-Value=2.2e-09) 27 5.1
SB_30056| Best HMM Match : Linker_histone (HMM E-Value=2.4e-37) 27 5.1
SB_13543| Best HMM Match : DUF1020 (HMM E-Value=0.44) 27 5.1
SB_44844| Best HMM Match : DUF164 (HMM E-Value=0.094) 27 6.8
SB_24318| Best HMM Match : Pox_A32 (HMM E-Value=0.029) 27 6.8
SB_19215| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_10083| Best HMM Match : Ion_trans (HMM E-Value=0) 27 6.8
SB_3752| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_44965| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_40000| Best HMM Match : Pox_A32 (HMM E-Value=0.053) 26 9.0
SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
SB_1307| Best HMM Match : Filament (HMM E-Value=0.13) 26 9.0
SB_805| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.0
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 32.7 bits (71), Expect = 0.10
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Query: 8 SGAAKKPQIPSPATSPSVMPDAARTFIK--RPETKRRSLDNMDLYRKQQQYYAETPSDQL 65
SG + QIPS SV PD A K R + L + +RK + Y ++
Sbjct: 299 SGYQSQVQIPSVVHDTSVAPDRAEHDHKGRRGDLLEMKLYRYEEHRKSESYSVDSSFFSS 358
Query: 66 LQEVMKTFEDIPSKVQQYPQMRRDIKSF 93
+ E + +ED + PQ RR SF
Sbjct: 359 MVEEQEAYEDGRYHEEFIPQGRRSRGSF 386
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 30.7 bits (66), Expect = 0.42
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 3 HTPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPS 62
H +TS A P +PSPA+S P R +R ++++ + L R+Q++
Sbjct: 663 HHSSTSNATS-PIVPSPASSDHPKPGRPRN--RRQSSRKQQEEKERLLREQEEERL---- 715
Query: 63 DQLLQEVMKTFEDIPSKVQQYPQMRRDIKSF-LESQSDKSIRILFELSH 110
+L Q+ + +FE KV P R+I L ++ D ++ ++L H
Sbjct: 716 -RLEQQRVTSFESSMHKVLPSPPTPRNIMPINLVTEKDLAV-TEYDLDH 762
>SB_50684| Best HMM Match : Toxin_trans (HMM E-Value=4.8)
Length = 346
Score = 30.3 bits (65), Expect = 0.55
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 59 ETPSDQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLE 95
+ P +L+ + K E++ S+ ++ ++ RDI+SFL+
Sbjct: 169 DEPVTAVLENIKKMVEEVSSRSEEMSEVARDIQSFLD 205
>SB_24034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 30.3 bits (65), Expect = 0.55
Identities = 11/37 (29%), Positives = 24/37 (64%)
Query: 59 ETPSDQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLE 95
+ P +L+ + K E++ S+ ++ ++ RDI+SFL+
Sbjct: 11 DEPVTAVLENIKKMVEEVSSRSEEMSEVARDIQSFLD 47
>SB_46046| Best HMM Match : DUF164 (HMM E-Value=0.38)
Length = 221
Score = 29.9 bits (64), Expect = 0.73
Identities = 12/42 (28%), Positives = 28/42 (66%)
Query: 2 FHTPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRS 43
+H+ TT+ +K +I PA++ ++P +A T +++P T+ ++
Sbjct: 135 WHSITTTTPSKITEIKRPASTLGIVPVSAVTTVRKPVTRPKT 176
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 29.9 bits (64), Expect = 0.73
Identities = 12/42 (28%), Positives = 28/42 (66%)
Query: 2 FHTPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRS 43
+H+ TT+ +K +I PA++ ++P +A T +++P T+ ++
Sbjct: 394 WHSITTTTPSKITEIKRPASTLGIVPVSAVTTVRKPVTRPKT 435
>SB_31263| Best HMM Match : TP2 (HMM E-Value=5.5)
Length = 177
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 5 PTTSGAAKKPQIPSPAT-SPSVMPDAARTFIKRPETKRR 42
P+ AKKP +PSP T +PS +P +R I++ + +RR
Sbjct: 96 PSPPSQAKKPLLPSPPTGTPSSVP--SRRDIRKGKRRRR 132
>SB_5435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 28.7 bits (61), Expect = 1.7
Identities = 20/103 (19%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 1 MFHTPTTSGAAKKPQIPSPAT-----SPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQ 55
+ HT SG K+P+ +P T + PD ++ + ++ +S+++ +K +
Sbjct: 31 LLHTSELSGPGKRPRNRTPGTIQEPLKTQIKPDTSKKTLTDVVSEAKSIESA---KKTSK 87
Query: 56 YYAETPSDQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQS 98
A++ + + +E KT D+ S+ + ++ K +S +
Sbjct: 88 LIADSSAKGIEEE--KTLTDVVSEAKSIESAKKTSKLIADSSA 128
>SB_15511| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 28.3 bits (60), Expect = 2.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 56 YYAETPSDQLLQEVMKTFEDIPSKVQQY 83
YY E D+++ V K+F D K+++Y
Sbjct: 302 YYTEVEQDEMIAVVTKSFRDAARKLKKY 329
>SB_21468| Best HMM Match : RVT_1 (HMM E-Value=1.2)
Length = 368
Score = 28.3 bits (60), Expect = 2.2
Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Query: 3 HTPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNM-DLYRKQQQYYAETP 61
H T G+ KK P S +V+ K+ E +RR ++ ++ +QQ P
Sbjct: 41 HMKTLYGSTKKLCNERPRHSTAVLDKDGNLLSKKEEIQRRWTEHFREVLNRQQPDNPIEP 100
Query: 62 SDQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQSDKSIRILFEL 108
D++ E + E+I + +++ I + +S I EL
Sbjct: 101 EDEVEFEFGELIEEISVNEPTFGEVKDTITTLKNGKSPGIDNITAEL 147
>SB_46154| Best HMM Match : zf-C2H2 (HMM E-Value=7.9e-27)
Length = 799
Score = 27.9 bits (59), Expect = 2.9
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 20 ATSPSVMPDAARTFIK-RPETKRRSLDNMDLYRKQQQYYA--ETPSDQLLQEVMKTFEDI 76
A+S S D +T K + T ++ N D RK + + A ++ S+Q+L+E + TFE I
Sbjct: 435 ASSESRSFDYYQTLSKDKSITPNVTVFNTDRQRKSEIFCAPVKSKSEQILKETLSTFEAI 494
Query: 77 --PSKVQQYPQMRRDIKSFLESQSDKSIRILF 106
PS + +++ K +++ K R+ F
Sbjct: 495 LRPSDGESEGRLQLGSKRTDSAENKKEKRLEF 526
>SB_19785| Best HMM Match : SRR1 (HMM E-Value=8.8e-19)
Length = 735
Score = 27.9 bits (59), Expect = 2.9
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 27 PDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSD 63
P+ + I+R + R+LDNM+ + ++ +E P D
Sbjct: 619 PNIIKDLIRRTKAAVRALDNMNYRKMKKMIMSEAPGD 655
>SB_1300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 27.9 bits (59), Expect = 2.9
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 14 PQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAE 59
P+ A PSV P + + + +P D RK+++YYA+
Sbjct: 46 PRSAPSAAPPSVKPASVKETVGKPRQYNEDDDPTTARRKKKKYYAK 91
>SB_28380| Best HMM Match : MCPsignal (HMM E-Value=0)
Length = 249
Score = 27.5 bits (58), Expect = 3.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 65 LLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQSDKS 101
L Q+ K E+I + +QQ Q RD+ +E K+
Sbjct: 124 LAQKTQKATEEIQAMIQQLQQGTRDVVKVMEDSQSKT 160
>SB_23483| Best HMM Match : Glyco_hydro_38C (HMM E-Value=0)
Length = 965
Score = 27.5 bits (58), Expect = 3.9
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 8 SGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDL--YRKQQQYY 57
SG+AK+P + T + P RTF K++S D++ + RK ++ Y
Sbjct: 906 SGSAKQPSLRLANTPVELRPMQIRTFKATLRMKKKSKDSVQMTKIRKAKRVY 957
>SB_23426| Best HMM Match : NHL (HMM E-Value=1.1e-19)
Length = 566
Score = 27.5 bits (58), Expect = 3.9
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 51 RKQQQYYAETPSDQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQSDK-SIRILFELS 109
+K+ Q T D+L +++ K + ++++ ++R D ++ S K I+ ++
Sbjct: 135 KKELQSRITTLKDELAKDMNKEKAEFEKRLKETKKVREDAAKYMNSPDSKLHEEIVRKIC 194
Query: 110 HDVI--AVKGTCCKKYSASIK 128
D I A K C KY SI+
Sbjct: 195 DDFINNAAK-NCPSKYDPSIR 214
>SB_59266| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 678
Score = 27.5 bits (58), Expect = 3.9
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 7/102 (6%)
Query: 1 MFHTPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAET 60
M H A++KP+ P P T +K E S+D M L E
Sbjct: 357 MSHDELAVAASEKPK-PKPRTRTISQASEPDKPVKPVE--EMSVDEMILAANGDAQ-PER 412
Query: 61 PSDQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQSDKSI 102
P+D++ +E+ F+D ++ + D++ + S+ DK++
Sbjct: 413 PADEIKEEITNEFDD---DEEEEEEEGHDVEEKVSSEVDKNL 451
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 27.5 bits (58), Expect = 3.9
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 51 RKQQQYYAETPSDQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQSDK-SIRILFELS 109
+K+ Q T D+L +++ K + ++++ ++R D ++ S K I+ ++
Sbjct: 244 KKELQSRITTLKDELAKDMNKEKAEFEKRLKETKKVREDAAKYMNSPDSKLHEEIVRKIC 303
Query: 110 HDVI--AVKGTCCKKYSASIK 128
D I A K C KY SI+
Sbjct: 304 DDFINNAAK-NCPSKYDPSIR 323
>SB_26345| Best HMM Match : DUF1531 (HMM E-Value=2.4)
Length = 169
Score = 27.5 bits (58), Expect = 3.9
Identities = 17/92 (18%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Query: 12 KKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQLLQEVMK 71
KK + T +P+ +T K++ + ++QQ A + + + + ++
Sbjct: 60 KKKKDKKKKTEEETVPETVQTETPSARKKKKKEKEQEETMEEQQTEATSSAKKKKKRKVE 119
Query: 72 TFEDIPSKVQ-QYPQMRRDIKSFLESQSDKSI 102
ED+ KV+ + P+ ++ E + ++SI
Sbjct: 120 DVEDVEEKVEAETPKKKKKKSETTEDEIEESI 151
>SB_54710| Best HMM Match : Linker_histone (HMM E-Value=6e-38)
Length = 234
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 5 PTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKR 41
P AAKKP A P+ P AA+ K+P K+
Sbjct: 191 PAAKKAAKKPAAKKAAAKPAKKP-AAKKAAKKPAAKK 226
>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2143
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/70 (22%), Positives = 31/70 (44%)
Query: 7 TSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQLL 66
++G +P + S +PD ++ R L L +QQQ ++ DQL+
Sbjct: 417 STGMVAPTYVPMATSYSSPVPDVNSLAAQQQVLIDRLLQQQALLHQQQQELSQKSQDQLV 476
Query: 67 QEVMKTFEDI 76
Q ++ E++
Sbjct: 477 QLQLQHAEEL 486
>SB_18627| Best HMM Match : Histone (HMM E-Value=1.7e-30)
Length = 279
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 5 PTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKR 41
P AAKKP A P+ P AA+ K+P K+
Sbjct: 236 PAAKKAAKKPAAKKAAAKPAKKP-AAKKATKKPAAKK 271
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 4 TPTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKR 41
TP T Q SP+TS + P+ R+ K+ +TK+
Sbjct: 2371 TPPTGNNVSTTQASSPSTSTEITPNGTRS-TKQDKTKK 2407
>SB_41133| Best HMM Match : LRR_1 (HMM E-Value=2.2e-09)
Length = 539
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 32 TFIKRPETKRRSLDNMDLYRKQQQYYAETPSDQLLQEV 69
T KR + + SLDN Y + + TPS + LQ++
Sbjct: 114 TIRKRKQARLTSLDNKVRYLEMCESVKATPSSRFLQQI 151
>SB_30056| Best HMM Match : Linker_histone (HMM E-Value=2.4e-37)
Length = 184
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 5 PTTSGAAKKPQIPSPATSPSVMPDAARTFIKRPETKR 41
P AAKKP A P+ P AA+ K+P K+
Sbjct: 141 PAAKKAAKKPAAKKAAAKPAKKP-AAKKATKKPAAKK 176
>SB_13543| Best HMM Match : DUF1020 (HMM E-Value=0.44)
Length = 850
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 56 YYAETPSDQLLQEVMKTFEDI-PSKVQQYPQMRRDIKS 92
+ ETP D +V KT+E++ SKV++ ++ + I+S
Sbjct: 40 FAGETPQDTSRYDVFKTYEELYLSKVEREDRLEQGIQS 77
>SB_44844| Best HMM Match : DUF164 (HMM E-Value=0.094)
Length = 332
Score = 26.6 bits (56), Expect = 6.8
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 61 PSDQLLQEVMKTFEDIPSKVQQYPQMRRDIKSFLESQSDKSIRILFELSHDVIAVKGTCC 120
PS L QE + EDI Q+ Q R+I + ++++D+ ++ L E H V+ +
Sbjct: 33 PSLHLYQERHRHGEDIEKLKQEIEQKEREINNLRKTRNDE-VKKLKERIH-VLEEEKKRL 90
Query: 121 KKYSASIKGYKI 132
++ AS+K YK+
Sbjct: 91 EEELASVK-YKL 101
>SB_24318| Best HMM Match : Pox_A32 (HMM E-Value=0.029)
Length = 598
Score = 26.6 bits (56), Expect = 6.8
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 56 YYAETPSDQLLQEVMKTFEDI-PSKVQQYPQMRRDIKS 92
+ ET D L +V KT+ED+ SKV++ ++ + I+S
Sbjct: 91 FAGETLQDTNLYDVFKTYEDLYLSKVEREDRLEQGIQS 128
>SB_19215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 26.6 bits (56), Expect = 6.8
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 56 YYAETPSDQLLQEVMKTFEDI-PSKVQQYPQMRRDIKS 92
+ ET D L +V KT+ED+ SKV++ ++ + I+S
Sbjct: 91 FAGETLQDTNLYDVFKTYEDLYLSKVEREDRLEQGIQS 128
>SB_10083| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1457
Score = 26.6 bits (56), Expect = 6.8
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 38 ETKRRSLDNMDLYRKQQQYYAETPSDQLLQEVMKTF 73
ETK R ++ M+ R++Q+Y + S L+++ +TF
Sbjct: 51 ETKAREIELMEENRRRQRYRSSRFSLSCLEKLRRTF 86
>SB_3752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1048
Score = 26.6 bits (56), Expect = 6.8
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 56 YYAETPSDQLLQEVMKTFEDI-PSKVQQYPQMRRDIKS 92
+ ETP D +V KT+E++ SKV++ ++ + I+S
Sbjct: 91 FAGETPQDTNRYDVFKTYEELYLSKVEREDRLEQGIQS 128
>SB_44965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1114
Score = 26.2 bits (55), Expect = 9.0
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 44 LDNMDLYRKQQQYYAETPSDQLLQEVMKTFEDIPSKVQQYPQ 85
L DLY+K+Q + E P + + Q + TF + + Q+ +
Sbjct: 52 LHERDLYKKEQPFGNENPWEVVRQILDSTFGQYEASLNQHTE 93
>SB_40000| Best HMM Match : Pox_A32 (HMM E-Value=0.053)
Length = 946
Score = 26.2 bits (55), Expect = 9.0
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 59 ETPSDQLLQEVMKTFEDI-PSKVQQYPQMRRDIKS 92
ETP D +V KT+E++ SKV++ ++ + I+S
Sbjct: 63 ETPQDTNRYDVFKTYEELYLSKVEREDRLEQGIQS 97
>SB_23753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 26.2 bits (55), Expect = 9.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 4 TPTTSGAAKKPQIPS-PATSPSVMPDAARTFIKRPETKRRSLDNMD 48
T TT+ A +P+ P++SPS + T I P T+ +L M+
Sbjct: 373 TVTTTTATSSSMLPNTPSSSPSTGTQPSSTPIHEPPTQGTTLVTME 418
>SB_1307| Best HMM Match : Filament (HMM E-Value=0.13)
Length = 916
Score = 26.2 bits (55), Expect = 9.0
Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 28 DAARTFIKRPETKRRSLDNMDLYRKQQQYYA---ETPSDQLLQEVMKTFEDIPSKVQQYP 84
+ R + + TKR++L+ ++ + Q Q + E SD+L +++ + I + +
Sbjct: 487 ETMREKLNKESTKRQNLEE-EIRKLQLQVCSQGGEKESDRLQKKIRSLEKTISQMIDEND 545
Query: 85 QMRRDIKSFLESQSDKSI 102
+RR K + + +KS+
Sbjct: 546 NLRRHEKKLKDLEQNKSL 563
>SB_805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1270
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 78 SKVQQYPQMRRDIKSFLESQSDKSIRILFELS 109
+K+ + ++I+ ++ES SDK +LFEL+
Sbjct: 268 NKLDEIELEAKNIQEYIESTSDKFAFVLFELN 299
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.129 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,430,395
Number of Sequences: 59808
Number of extensions: 174895
Number of successful extensions: 881
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 862
Number of HSP's gapped (non-prelim): 44
length of query: 133
length of database: 16,821,457
effective HSP length: 75
effective length of query: 58
effective length of database: 12,335,857
effective search space: 715479706
effective search space used: 715479706
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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